Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 3.5e-106 388.3 194 100.0
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 5.9e-69 264.6 139 95.7
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 2.2e-47 193.0 138 76.1
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 6.4e-47 191.4 139 71.2
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 3.5e-45 185.7 133 72.2
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 2.3e-44 183.0 142 71.1
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 8.6e-44 181.0 139 69.8
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 8.6e-44 181.0 139 71.2
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 8.6e-44 181.0 139 71.2
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 5.6e-43 178.3 139 71.2
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 3.6e-42 175.6 142 68.3
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 1.4e-41 173.7 135 71.9
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 6.8e-41 171.4 125 74.4
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 2.6e-40 169.5 137 68.6
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 2.6e-40 169.5 138 68.1
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 4.4e-40 168.7 155 60.6
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 3.7e-39 165.6 138 67.4
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.1e-38 164.1 138 66.7
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 3.2e-38 162.5 137 65.0
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 2.0e-37 159.8 140 66.4
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 7.8e-37 157.9 137 65.7
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 1.3e-36 157.1 143 62.9
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 1.3e-36 157.1 138 65.9
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 1.7e-36 156.8 133 66.2
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 2.3e-36 156.4 138 65.2
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 2.3e-36 156.4 146 63.0
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 8.6e-36 154.5 132 64.4
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.1e-35 154.1 138 64.5
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 1.5e-35 153.7 125 65.6
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 2.8e-34 149.4 141 60.3
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 3.6e-34 149.1 126 66.7
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 1.8e-33 146.7 138 60.1
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 4.0e-33 145.6 137 61.3
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 8.9e-33 144.4 138 60.1
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 1.5e-32 143.7 141 61.7
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 2.0e-32 143.3 140 62.9
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 2.6e-32 142.9 139 58.3
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 4.4e-32 142.1 160 54.4
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 9.8e-32 141.0 132 64.4
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 1.3e-31 140.6 140 56.4
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 2.2e-31 139.8 140 60.0
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 2.9e-31 139.4 141 57.4
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 2.9e-31 139.4 140 61.4
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 3.7e-31 139.0 141 56.7
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 3.2e-30 136.0 136 60.3
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 5.4e-30 135.2 143 55.9
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 1.2e-29 134.0 142 56.3
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 2.1e-29 133.3 131 61.1
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.7e-29 132.9 133 57.9
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 4.6e-29 132.1 162 51.2
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.0e-28 131.0 138 57.2
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 1.0e-28 131.0 138 52.9
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 1.7e-28 130.2 86 77.9
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 1.7e-28 130.2 133 56.4
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 2.3e-28 129.8 164 48.2
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 2.3e-28 129.8 138 55.8
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 3.9e-28 129.0 146 54.8
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 1.1e-27 127.5 137 53.3
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 3.3e-27 125.9 142 54.9
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 3.3e-27 125.9 129 58.9
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 1.6e-26 123.6 131 55.0
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 6.2e-26 121.7 140 53.6
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 1.1e-25 120.9 140 52.1
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 1.8e-25 120.2 124 59.7
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 5.2e-25 118.6 138 54.3
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 1.2e-24 117.5 126 58.7
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 1.2e-24 117.5 133 56.4
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 1.2e-24 117.5 127 56.7
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 2.0e-24 116.7 140 55.7
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 2.0e-24 116.7 133 57.1
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 4.4e-24 115.5 84 71.4
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 5.8e-24 115.2 133 56.4
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 5.8e-24 115.2 132 56.8
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 9.9e-24 114.4 139 54.0
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 1.3e-23 114.0 130 56.9
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 1.7e-23 113.6 90 64.4
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 2.2e-23 113.2 132 56.1
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 4.9e-23 112.1 138 50.0
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 4.9e-23 112.1 86 68.6
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 8.4e-23 111.3 132 51.5
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 1.9e-22 110.2 138 50.7
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 1.9e-22 110.2 138 52.2
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 3.2e-22 109.4 132 53.0
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 4.1e-22 109.0 132 51.5
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 4.1e-22 109.0 129 55.8
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 4.1e-22 109.0 138 52.2
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.2e-21 107.5 141 52.5
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.7e-21 106.3 149 49.7
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 3.5e-21 105.9 129 55.0
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 1.3e-20 104.0 138 50.7
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 1.7e-20 103.6 147 46.3
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.0e-20 102.8 138 47.8
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 5.1e-20 102.1 126 50.8
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 6.6e-20 101.7 165 42.4
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 6.6e-20 101.7 138 50.0
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 5.6e-19 98.6 125 49.6
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 7.3e-19 98.2 124 50.0
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.3e-19 98.2 138 49.3
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 2.1e-18 96.7 117 48.7
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 2.8e-18 96.3 140 42.1
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 3.8e-15 85.9 148 45.3
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.9e-14 83.6 87 56.3
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 2.4e-14 83.2 141 39.0
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 2.4e-14 83.2 132 42.4
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.6e-13 80.5 144 43.1
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 3.3e-11 72.8 131 38.2
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 7.3e-11 71.6 110 40.0
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 9.6e-11 71.2 138 39.1
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 9.6e-11 71.2 139 39.6
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 2.8e-10 69.7 45 75.6
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 8.1e-10 68.2 104 38.5
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 2.4e-09 66.6 93 43.0
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 1.2e-08 64.3 103 39.8
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 4.5e-08 62.4 37 75.7
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 2.2e-07 60.1 87 42.5
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 5.4e-06 55.5 84 44.0


User provided reference genes

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