Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04036 Corylus avellana HOM05D013055 ORTHO05D014149 4.4e-129 464.9 284 100.0
Cfa006724 Carpinus fangiana HOM05D013055 ORTHO05D014149 4.7e-75 285.4 299 70.9
CiPaw.07G030700 Carya illinoinensis HOM05D013055 ORTHO05D014149 3.8e-40 169.5 197 72.1
CiPaw.08G154700 Carya illinoinensis HOM05D013055 ORTHO05D014149 8.5e-32 141.7 183 70.5
QL03p015395 Quercus lobata HOM05D013055 ORTHO05D014149 2.7e-30 136.7 178 69.1
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 8.2e-19 98.6 198 55.1
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 5.9e-17 92.4 184 48.4
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.8e-16 89.7 184 56.0
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 6.5e-16 89.0 183 52.5
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 1.1e-15 88.2 183 50.8
MD12G1204500 Malus domestica HOM05D018542 ORTHO05D014149 1.2e-14 84.7 184 55.4
Rhsim11G0096900 Rhododendron simsii HOM05D013055 ORTHO05D012930 1.2e-14 84.7 179 52.0
Actinidia16871 Actinidia chinensis HOM05D013055 ORTHO05D012930 1.6e-14 84.3 187 54.5
Ciclev10002618m.g Citrus clementina HOM05D013055 ORTHO05D014149 1.6e-14 84.3 183 36.6
vmacro01576 Vaccinium macrocarpon HOM05D013055 ORTHO05D012930 1.0e-13 81.6 180 55.0
Atru.chr2.269 Acer truncatum HOM05D013055 ORTHO05D004310 2.0e-12 77.4 174 37.9
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 2.4e-10 70.5 196 48.5
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 5.3e-10 69.3 105 38.1
Prupe.6G311200 Prunus persica HOM05D018542 ORTHO05D014149 5.3e-10 69.3 186 48.9
Lju926C3T5 Lonicera japonica HOM05D009154 ORTHO05D004310 3.5e-09 66.6 181 37.0
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 7.7e-09 65.5 189 32.3
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 1.3e-08 64.7 185 51.9
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 1.3e-08 64.7 196 48.5
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 1.3e-08 64.7 196 48.5
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 2.2e-08 63.9 189 32.3
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 2.9e-08 63.5 182 33.0
Cc02_g35210 Coffea canephora HOM05D015885 ORTHO05D012930 6.5e-08 62.4 189 41.8
Manes.08G110400 Manihot esculenta HOM05D013055 ORTHO05D014149 6.5e-08 62.4 184 48.9
Nitab4.5_0010074g0020 Nicotiana tabacum HOM05D015885 ORTHO05D012930 6.5e-08 62.4 201 48.8
CANSAT54G0035 Cannabis sativa HOM05D009154 ORTHO05D014149 1.5e-07 61.2 203 28.1
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 2.5e-07 60.5 196 48.0
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.5e-07 60.5 188 47.3
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 2.5e-07 60.5 183 48.6
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 3.2e-07 60.1 116 36.2
Aqoxy2G02667 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 4.2e-07 59.7 187 52.9
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 7.2e-07 58.9 183 49.7
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 7.2e-07 58.9 187 47.1
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 1.2e-06 58.2 117 35.0
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 2.1e-06 57.4 186 29.0
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 2.1e-06 57.4 203 26.1
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 2.1e-06 57.4 180 31.7
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 2.7e-06 57.0 187 47.6
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 3.6e-06 56.6 184 34.2
Oeu064831.1 Olea europaea HOM05D020384 ORTHO05D012930 3.6e-06 56.6 189 48.1
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 4.7e-06 56.2 187 44.9
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 6.1e-06 55.8 199 30.7
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 8.0e-06 55.5 188 46.3


User provided reference genes

Program Settings