Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03958 Corylus avellana HOM05D008539 ORTHO05D010637 0.0e+00 1172.1 587 100.0
Cfa006803 Carpinus fangiana HOM05D000349 ORTHO05D000620 0.0e+00 1096.3 589 94.4
CiPaw.08G148100 Carya illinoinensis HOM05D008539 ORTHO05D010637 1.8e-206 723.0 582 67.2
QL06p038103 Quercus lobata HOM05D008539 ORTHO05D010637 4.4e-168 595.5 565 62.7
Prupe.6G212800 Prunus persica HOM05D008539 ORTHO05D010637 7.1e-166 588.2 580 56.4
Manes.13G106500 Manihot esculenta HOM05D008539 ORTHO05D010637 3.0e-156 556.2 569 54.1
Atru.chr3.1092 Acer truncatum HOM05D008539 ORTHO05D010637 4.9e-135 485.7 578 49.3
CANSAT01G2572 Cannabis sativa HOM05D008539 ORTHO05D010637 7.4e-131 471.9 614 50.2
RcHm_v2.0_Chr2g0109471 Rosa chinensis HOM05D008539 ORTHO05D010637 2.1e-130 470.3 591 49.4
FvH4_1g18650 Fragaria vesca HOM05D008539 ORTHO05D010637 4.5e-128 462.6 595 49.1
Gohir.A11G210466 Gossypium hirsutum HOM05D008539 ORTHO05D010637 5.8e-128 462.2 590 47.6
Ciclev10025260m.g Citrus clementina HOM05D008539 ORTHO05D010637 1.4e-126 457.6 553 51.5
Dinv26981 Davidia involucrata HOM05D000349 ORTHO05D010637 3.5e-125 453.0 465 56.1
FAN28G0277 Fragaria x ananassa HOM05D008539 ORTHO05D010637 2.3e-124 450.3 598 48.0
FAN23G1883 Fragaria x ananassa HOM05D008539 ORTHO05D010637 4.1e-121 439.5 598 48.0
FAN26G2853 Fragaria x ananassa HOM05D008539 ORTHO05D010637 6.9e-121 438.7 598 47.5
Nn5g30717 Nelumbo nucifera HOM05D008539 ORTHO05D010637 2.2e-119 433.7 608 45.9
Thecc.01G080200 Theobroma cacao HOM05D008539 ORTHO05D010637 3.1e-113 413.3 424 53.5
COL.COLO4_11651 Corchorus olitorius HOM05D008539 ORTHO05D010637 7.9e-109 398.7 545 47.5
Gohir.D11G212700 Gossypium hirsutum HOM05D008539 ORTHO05D010637 6.7e-108 395.6 503 46.9
Gorai.007G228600 Gossypium raimondii HOM05D008539 ORTHO05D010637 4.8e-106 389.4 503 46.5
FAN19G1588 Fragaria x ananassa HOM05D008539 ORTHO05D010637 1.0e-95 355.1 630 41.3
Potri.007G009000 Populus trichocarpa HOM05D008539 ORTHO05D010637 1.4e-84 318.2 491 41.8
MBI16_g05035_MAGBIO Magnolia biondii HOM05D008539 ORTHO05D010637 1.0e-79 302.0 572 40.9
PSO675G5298 Papaver somniferum HOM05D008539 ORTHO05D010637 8.5e-79 298.9 577 38.0
PSO541G5024 Papaver somniferum HOM05D008539 ORTHO05D010637 9.5e-78 295.4 575 37.4
Hma1.2p1_1147F.1_g261540 Hydrangea macrophylla HOM05D008539 ORTHO05D010637 1.5e-75 288.1 532 40.6
Ciclev10007100m.g Citrus clementina HOM05D008539 ORTHO05D010637 4.3e-70 270.0 336 51.5
ATR0767G189 Amborella trichopoda HOM05D008539 ORTHO05D010637 2.3e-68 264.2 610 35.7
Lalb_Chr09g0323801 Lupinus albus HOM05D008539 ORTHO05D010637 5.7e-67 259.6 585 35.7
Glyma.01G197400 Glycine max HOM05D008539 ORTHO05D010637 3.2e-65 253.8 548 39.2
Cpa.g.sc129.44 Carica papaya HOM05D008539 ORTHO05D010637 5.4e-65 253.1 331 49.8
TAR628G1178 Trochodendron aralioides HOM05D008539 ORTHO05D010637 9.2e-65 252.3 341 47.2
arahy.Tifrunner.gnm1.ann1.P8GH0J Arachis hypogaea HOM05D008539 ORTHO05D010637 2.7e-64 250.8 569 36.7
arahy.Tifrunner.gnm1.ann1.W1L6ST Arachis hypogaea HOM05D008539 ORTHO05D010637 2.7e-64 250.8 569 36.7
TAR628G0786 Trochodendron aralioides HOM05D008539 ORTHO05D010637 1.0e-63 248.8 272 51.5
ClCG01G017970 Citrullus lanatus HOM05D008539 ORTHO05D010637 2.4e-57 227.6 575 36.3
Phvul.002G008000 Phaseolus vulgaris HOM05D008539 ORTHO05D010637 7.0e-57 226.1 545 35.4
Glyma.11G044300 Glycine max HOM05D008539 ORTHO05D010637 7.3e-54 216.1 400 42.2
CsaV3_6G044500 Cucumis sativus L. HOM05D008539 ORTHO05D010637 4.7e-53 213.4 572 35.3
Sed0007885 Sechium edule HOM05D008539 ORTHO05D010637 5.8e-51 206.5 404 40.1
SEGI_19235 Sequoiadendron giganteum HOM05D008539 ORTHO05D010637 3.2e-49 200.7 642 30.2
MELO3C007672.2 Cucumis melo HOM05D008539 ORTHO05D010637 1.6e-48 198.4 571 32.0
Sc07g0000280 Simmondsia chinensis HOM05D008539 ORTHO05D010637 3.5e-48 197.2 578 30.6
Sabra07G0006900 Salix brachista HOM05D002093 ORTHO05D008902 2.9e-42 177.6 524 31.5
VMungo1215G1773 Vigna mungo HOM05D008539 ORTHO05D010637 5.4e-41 173.3 589 32.9
Cc07_g07630 Coffea canephora HOM05D008539 ORTHO05D010637 3.9e-39 167.2 456 32.7
Mapoly0011s0007 Marchantia polymorpha HOM05D008539 ORTHO05D010637 2.8e-21 107.8 526 27.2
Medtr5g014750 Medicago truncatula HOM05D008539 ORTHO05D010637 9.0e-20 102.8 267 34.5
TPR.G28861 Trifolium pratense HOM05D008539 ORTHO05D010637 8.7e-15 86.3 359 29.5
Medtr5g014770 Medicago truncatula HOM05D008539 ORTHO05D010637 1.2e-08 65.9 237 27.8
Ca_24661_v3 Cicer arietinum L. HOM05D008539 ORTHO05D010637 6.0e-08 63.5 227 29.5


User provided reference genes

Program Settings