Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03915 Corylus avellana HOM05D009031 ORTHO05D011569 3.0e-75 285.0 137 100.0
Haze_05735 Corylus avellana HOM05D009031 ORTHO05D000167 3.5e-31 138.7 101 68.3
Haze_03983 Corylus avellana HOM05D009031 ORTHO05D000167 4.7e-28 128.3 104 65.4
Haze_27611 Corylus avellana HOM05D009031 ORTHO05D000167 1.5e-26 123.2 102 61.8
Haze_04316 Corylus avellana HOM05D009031 ORTHO05D000167 8.2e-25 117.5 80 68.8
Haze_18869 Corylus avellana HOM05D000013 ORTHO05D000011 7.0e-24 114.4 85 65.9
Haze_13888 Corylus avellana HOM05D009031 ORTHO05D000167 1.2e-18 97.1 111 45.0
Haze_05932 Corylus avellana HOM05D009031 ORTHO05D000167 4.1e-16 88.6 86 52.3
Haze_17966 Corylus avellana HOM05D009031 ORTHO05D000167 2.7e-12 75.9 62 61.3
Haze_05558 Corylus avellana HOM05D000027 ORTHO05D000066 4.7e-12 75.1 103 41.7
Haze_11698 Corylus avellana HOM05D009031 ORTHO05D000167 3.0e-11 72.4 55 67.3
Haze_08483 Corylus avellana HOM05D042742 ORTHO05D000167 1.5e-10 70.1 79 40.5
Haze_12730 Corylus avellana HOM05D017763 ORTHO05D011569 1.5e-10 70.1 83 44.6
Haze_16013 Corylus avellana HOM05D000003 ORTHO05D000167 1.5e-10 70.1 86 40.7
Haze_18432 Corylus avellana HOM05D014997 ORTHO05D011569 3.4e-10 68.9 86 40.7
Haze_18346 Corylus avellana HOM05D009031 ORTHO05D011569 2.2e-09 66.2 98 40.8
Haze_16026 Corylus avellana HOM05D009031 ORTHO05D011569 6.3e-09 64.7 50 66.0
Atru.chr9.1174 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-08 62.8 111 32.4
Haze_11065 Corylus avellana HOM05D009031 ORTHO05D000167 3.1e-08 62.4 79 38.0
Cfa012542 Carpinus fangiana HOM05D009031 ORTHO05D000167 9.1e-08 60.8 90 38.9
Atru.chr8.183 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-07 60.5 99 36.4
Atru.chr8.265 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-07 60.5 99 36.4
Haze_00602 Corylus avellana HOM05D009031 ORTHO05D029138 1.2e-07 60.5 63 49.2
PSO675G3281 Papaver somniferum HOM05D000003 ORTHO05D001026 2.0e-07 59.7 86 37.2
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-07 59.3 92 35.9
Haze_08252 Corylus avellana HOM05D009546 ORTHO05D014580 3.5e-07 58.9 77 40.3
Atru.chr4.152 Acer truncatum HOM05D000003 ORTHO05D000167 4.5e-07 58.5 98 31.6
Haze_09308 Corylus avellana HOM05D001621 ORTHO05D000167 4.5e-07 58.5 86 36.0
CiPaw.13G119100 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.9e-07 58.2 106 33.0
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 5.9e-07 58.2 86 39.5
Haze_23484 Corylus avellana HOM05D062968 ORTHO05D016203 7.7e-07 57.8 90 38.9
Haze_00052 Corylus avellana HOM05D009031 ORTHO05D011569 1.0e-06 57.4 47 61.7
PSO135G0665 Papaver somniferum HOM05D003407 ORTHO05D001026 1.0e-06 57.4 99 31.3
Cfa012550 Carpinus fangiana HOM05D000003 ORTHO05D011569 1.7e-06 56.6 88 33.0
RcHm_v2.0_Chr4g0402201 Rosa chinensis HOM05D000003 ORTHO05D000004 1.7e-06 56.6 86 32.6
TWI63G0799 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.7e-06 56.6 85 37.6
Atru.chr2.2868 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 84 35.7
Atru.chr6.486 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-06 56.2 94 30.9
Atru.chr3.1850 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 87 33.3
CSS0003020 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 2.9e-06 55.8 86 37.2
Haze_19109 Corylus avellana HOM05D021984 ORTHO05D000167 2.9e-06 55.8 77 44.2
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.8e-06 55.5 86 34.9
Sed0027430 Sechium edule HOM05D000003 ORTHO05D000004 3.8e-06 55.5 89 36.0
Atru.chr12.350 Acer truncatum HOM05D000003 ORTHO05D000167 5.0e-06 55.1 93 34.4
Atru.chr6.1733 Acer truncatum HOM05D000003 ORTHO05D000167 5.0e-06 55.1 96 34.4
CSS0014223 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 5.0e-06 55.1 92 34.8
CSS0046159 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 5.0e-06 55.1 92 34.8
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.0e-06 55.1 84 35.7
Haze_27781 Corylus avellana HOM05D009031 ORTHO05D011569 6.6e-06 54.7 63 47.6
RcHm_v2.0_Chr4g0415961 Rosa chinensis HOM05D000003 ORTHO05D000167 6.6e-06 54.7 124 26.6
Sed0027500 Sechium edule HOM05D000003 ORTHO05D000006 6.6e-06 54.7 122 26.2
TWI12G1409 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 6.6e-06 54.7 77 36.4
Atru.chr9.663 Acer truncatum HOM05D000003 ORTHO05D000167 8.6e-06 54.3 84 33.3
CiPaw.15G035300 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.6e-06 54.3 86 34.9
PSO478G1264 Papaver somniferum HOM05D003407 ORTHO05D001026 8.6e-06 54.3 109 32.1
QL10p017193 Quercus lobata HOM05D000003 ORTHO05D000167 8.6e-06 54.3 104 35.6
SEGI_21104 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 8.6e-06 54.3 108 36.1


User provided reference genes

Program Settings