Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 9.6e-44 179.9 97 100.0
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 2.2e-32 142.1 97 82.5
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 1.3e-27 126.3 98 76.5
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 1.2e-25 119.8 92 73.9
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.4e-24 114.0 91 71.4
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.4e-24 114.0 91 71.4
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 1.1e-23 113.2 93 72.0
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 1.1e-23 113.2 91 69.2
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.1e-23 113.2 91 69.2
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 1.9e-23 112.5 92 70.7
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 5.5e-23 110.9 97 66.0
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 7.1e-23 110.5 91 70.3
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 1.0e-21 106.7 94 64.9
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 3.0e-21 105.1 97 64.9
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 8.7e-21 103.6 95 66.3
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.5e-20 102.8 97 62.9
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 1.9e-20 102.4 97 63.9
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 1.9e-20 102.4 97 63.9
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 1.9e-20 102.4 98 64.3
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 3.3e-20 101.7 97 61.9
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 3.3e-20 101.7 97 63.9
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 3.3e-20 101.7 97 62.9
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 3.3e-20 101.7 91 63.7
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 4.3e-20 101.3 94 66.0
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 4.3e-20 101.3 94 66.0
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 5.6e-20 100.9 102 63.7
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 7.4e-20 100.5 99 63.6
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 9.6e-20 100.1 97 62.9
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 1.3e-19 99.8 97 61.9
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 1.6e-19 99.4 97 60.8
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 1.6e-19 99.4 97 58.8
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 2.1e-19 99.0 97 60.8
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 2.1e-19 99.0 97 60.8
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 2.1e-19 99.0 91 62.6
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 2.8e-19 98.6 105 59.0
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 3.7e-19 98.2 99 64.6
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 4.8e-19 97.8 95 62.1
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.8e-18 95.9 97 60.8
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 4.0e-18 94.7 97 58.8
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 5.3e-18 94.4 97 58.8
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 1.2e-17 93.2 91 60.4
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 1.2e-17 93.2 99 61.6
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 1.5e-17 92.8 97 59.8
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 2.6e-17 92.0 93 58.1
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 1.3e-16 89.7 97 56.7
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 1.3e-16 89.7 87 64.4
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 1.7e-16 89.4 94 57.4
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 2.9e-16 88.6 95 58.9
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 3.8e-16 88.2 86 62.8
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 3.8e-16 88.2 87 63.2
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 1.1e-15 86.7 97 56.7
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 1.4e-15 86.3 92 59.8
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 1.9e-15 85.9 87 57.5
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 1.9e-15 85.9 94 58.5
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.9e-15 85.9 101 52.5
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 1.9e-15 85.9 92 54.3
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 2.5e-15 85.5 91 56.0
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 2.5e-15 85.5 60 81.7
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 3.2e-15 85.1 96 52.1
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 3.2e-15 85.1 96 53.1
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 3.2e-15 85.1 92 57.6
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.6e-14 82.8 94 56.4
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 1.6e-14 82.8 91 57.1
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 2.1e-14 82.4 83 62.7
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 2.7e-14 82.0 94 56.4
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 3.5e-14 81.6 93 55.9
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 1.0e-13 80.1 92 54.3
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.8e-13 79.3 68 69.1
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 5.1e-13 77.8 66 68.2
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 3.3e-12 75.1 82 58.5
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 5.7e-12 74.3 87 57.5
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.6e-11 72.8 102 51.0
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.6e-11 72.8 91 49.5
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.1e-10 70.1 90 47.8
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 3.8e-08 61.6 50 70.0
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 2.1e-06 55.8 92 48.9
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 6.1e-06 54.3 88 46.6


User provided reference genes

Program Settings