Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 8.0e-274 946.4 460 100.0
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.2e-215 752.3 452 84.1
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 9.1e-185 650.6 456 73.0
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 7.2e-182 641.0 456 72.4
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 1.0e-167 594.0 456 66.2
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 5.5e-166 588.2 455 64.8
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 2.7e-165 585.9 460 63.7
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 2.7e-165 585.9 452 65.0
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 2.0e-163 579.7 458 64.4
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 2.2e-162 576.2 453 64.2
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.1e-161 573.9 456 64.9
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 5.4e-161 571.6 451 64.1
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.2e-160 570.5 451 64.3
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.6e-160 570.1 459 63.4
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.0e-159 567.4 454 63.0
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.0e-159 567.4 456 62.5
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 5.0e-159 565.1 452 63.5
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.9e-158 563.1 461 61.8
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 7.2e-158 561.2 456 61.2
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 2.7e-157 559.3 485 60.0
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 6.1e-157 558.1 456 61.0
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 6.1e-157 558.1 453 61.6
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 8.0e-157 557.8 454 61.9
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.0e-156 557.4 480 59.0
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.4e-156 557.0 450 63.1
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 6.8e-156 554.7 459 60.8
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 2.0e-155 553.1 462 59.7
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 3.4e-155 552.4 440 63.0
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 4.4e-155 552.0 449 61.7
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 9.8e-155 550.8 462 59.5
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 2.2e-154 549.7 456 61.4
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 8.3e-154 547.7 462 59.1
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 8.3e-154 547.7 460 60.2
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 5.4e-153 545.0 425 64.0
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 9.2e-153 544.3 455 60.9
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 2.0e-152 543.1 440 61.1
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 1.0e-151 540.8 453 59.8
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 6.6e-151 538.1 450 59.8
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 1.1e-150 537.3 456 61.0
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 1.5e-150 537.0 451 60.5
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.5e-150 537.0 453 59.6
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 3.3e-150 535.8 485 57.9
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 3.3e-150 535.8 455 59.8
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 7.3e-150 534.6 466 59.4
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 7.3e-150 534.6 455 59.6
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 4.7e-149 531.9 442 60.6
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.0e-148 529.3 455 58.7
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.2e-147 527.3 453 61.4
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 1.5e-147 526.9 411 64.5
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.5e-147 526.9 456 59.6
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.5e-147 526.9 454 58.1
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 2.6e-147 526.2 456 59.6
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 3.4e-147 525.8 455 58.7
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.4e-147 525.4 444 58.8
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 9.8e-147 524.2 443 58.9
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 9.8e-147 524.2 443 58.9
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 1.7e-146 523.5 444 58.6
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 2.2e-146 523.1 463 57.5
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 6.4e-146 521.5 454 57.9
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.4e-145 519.6 450 58.7
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 4.1e-145 518.8 456 56.6
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 9.2e-145 517.7 454 56.8
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 1.6e-144 516.9 454 57.3
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 4.6e-144 515.4 480 56.5
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 7.8e-144 514.6 451 57.6
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 5.0e-143 511.9 467 57.6
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 1.5e-142 510.4 478 54.8
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 5.6e-142 508.4 455 56.5
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 2.8e-141 506.1 445 57.5
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.1e-137 494.2 454 56.6
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.0e-136 490.0 397 60.2
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.0e-135 487.6 460 54.1
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 5.0e-135 485.3 366 65.6
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 1.1e-134 484.2 452 55.1
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 3.7e-130 469.2 513 50.1
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 1.0e-127 461.1 461 53.1
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.3e-127 460.7 496 50.6
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 1.7e-127 460.3 378 58.5
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.1e-124 451.1 448 54.2
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.4e-124 450.7 441 51.5
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.1e-124 449.5 296 74.7
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 5.2e-124 448.7 385 57.9
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 1.0e-119 434.5 483 48.0
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.9e-119 432.6 397 56.9
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.5e-118 429.9 453 53.9
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 3.5e-112 409.5 406 51.5
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 3.9e-111 406.0 397 54.7
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 2.4e-108 396.7 309 60.2
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.5e-102 377.5 366 52.5
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 1.7e-98 364.0 261 67.8
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 1.8e-92 344.0 219 69.9
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.8e-92 344.0 258 64.7
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 2.6e-91 340.1 259 64.9
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 3.2e-89 333.2 469 45.4
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.0e-82 311.6 445 40.2
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 8.2e-77 292.0 465 36.6
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 8.2e-77 292.0 394 41.6
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 1.0e-74 285.0 240 60.8
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 5.0e-74 282.7 425 39.3
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 5.1e-71 272.7 428 37.9
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 1.3e-69 268.1 448 39.5
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 4.5e-67 259.6 208 61.1
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.1e-62 245.0 228 55.7
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 3.8e-58 229.9 219 53.4
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 5.0e-58 229.6 233 48.5
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.2e-51 208.4 144 70.1
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.6e-51 208.0 243 45.7
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 2.5e-49 200.7 134 71.6
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 5.5e-49 199.5 242 45.9
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.6e-48 198.0 126 73.0
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 6.5e-42 176.0 325 34.5
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 6.1e-40 169.5 145 60.0
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 2.3e-34 151.0 114 63.2
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 2.9e-34 150.6 128 53.9
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 9.8e-30 135.6 141 46.8
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 5.6e-25 119.8 114 56.1
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 2.7e-19 100.9 171 36.8
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 4.9e-13 80.1 109 41.3
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 2.5e-09 67.8 42 78.6
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 8.9e-07 59.3 64 54.7


User provided reference genes

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