Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03772 Corylus avellana HOM05D006394 ORTHO05D008057 1.2e-183 646.4 330 100.0
CiPaw.07G057900 Carya illinoinensis HOM05D006394 ORTHO05D008057 7.3e-136 487.6 283 90.5
Prupe.7G167400 Prunus persica HOM05D006394 ORTHO05D008057 5.3e-118 428.3 284 79.2
GSVIVG01018789001 Vitis vinifera HOM05D006394 ORTHO05D008057 9.3e-115 417.5 284 78.2
MD15G1246300 Malus domestica HOM05D006394 ORTHO05D008057 2.3e-113 412.9 284 77.5
MELO3C007895.2 Cucumis melo HOM05D006394 ORTHO05D008057 5.1e-113 411.8 283 77.0
CsaV3_6G047020 Cucumis sativus L. HOM05D006394 ORTHO05D008057 1.1e-112 410.6 283 77.0
Duzib264G0144 Durio zibethinus HOM05D006394 ORTHO05D008057 8.1e-111 404.4 284 75.7
Thecc.01G019800 Theobroma cacao HOM05D006394 ORTHO05D008057 1.3e-108 397.1 284 74.3
VMungo0251G2040 Vigna mungo HOM05D006394 ORTHO05D008057 6.0e-106 388.3 282 72.3
Gorai.007G195500 Gossypium raimondii HOM05D006394 ORTHO05D008057 1.3e-105 387.1 284 73.9
Gohir.D11G183600 Gossypium hirsutum HOM05D006394 ORTHO05D008057 2.3e-105 386.3 284 73.9
Glyma.16G129000 Glycine max HOM05D006394 ORTHO05D008057 8.7e-105 384.4 280 73.6
Potri.005G115100 Populus trichocarpa HOM05D006394 ORTHO05D008057 1.9e-104 383.3 284 72.5
Ciclev10025906m.g Citrus clementina HOM05D006394 ORTHO05D008057 2.5e-104 382.9 287 72.5
QL06p032614 Quercus lobata HOM05D006394 ORTHO05D008057 2.5e-104 382.9 274 69.3
Gohir.D10G090000 Gossypium hirsutum HOM05D006394 ORTHO05D008057 3.7e-103 379.0 284 73.2
Lj4g0024758 Lotus japonicus HOM05D006394 ORTHO05D008057 8.1e-103 377.9 286 71.3
CANSAT01G2157 Cannabis sativa HOM05D006394 ORTHO05D008057 1.1e-102 377.5 289 70.9
Gohir.A11G175800 Gossypium hirsutum HOM05D006394 ORTHO05D008057 2.4e-102 376.3 284 73.6
Gorai.011G098800 Gossypium raimondii HOM05D006394 ORTHO05D008057 4.0e-102 375.6 284 72.9
Gohir.A10G098200 Gossypium hirsutum HOM05D006394 ORTHO05D008057 3.8e-100 369.0 284 71.8
COL.COLO4_21919 Corchorus olitorius HOM05D006394 ORTHO05D008057 8.4e-100 367.9 286 69.9
RcHm_v2.0_Chr2g0099531 Rosa chinensis HOM05D006394 ORTHO05D008057 8.4e-100 367.9 283 70.3
Ca_22372_v3 Cicer arietinum L. HOM05D006394 ORTHO05D008057 1.9e-99 366.7 284 70.8
Eucgr.J02427 Eucalyptus grandis HOM05D006394 ORTHO05D008057 1.9e-99 366.7 286 72.0
Lalb_Chr09g0333101 Lupinus albus HOM05D006394 ORTHO05D008057 1.9e-99 366.7 283 68.9
TWI53G2075 Tripterygium wilfordii HOM05D006394 ORTHO05D008057 1.9e-99 366.7 288 71.5
Glyma.02G048900 Glycine max HOM05D006394 ORTHO05D008057 7.1e-99 364.8 277 71.1
arahy.Tifrunner.gnm1.ann1.SHNU8N Arachis hypogaea HOM05D006394 ORTHO05D008057 4.6e-98 362.1 285 68.8
arahy.Tifrunner.gnm1.ann1.VDMC0V Arachis hypogaea HOM05D006394 ORTHO05D008057 4.6e-98 362.1 285 68.8
Actinidia22984 Actinidia chinensis HOM05D006394 ORTHO05D008057 2.0e-93 346.7 284 69.7
Psat4g099000 Pisum sativum HOM05D006394 ORTHO05D008057 5.8e-93 345.1 285 66.3
Medtr8g075970 Medicago truncatula HOM05D006394 ORTHO05D008057 2.2e-92 343.2 294 66.0
Rhsim10G0213000 Rhododendron simsii HOM05D006394 ORTHO05D008057 2.2e-92 343.2 319 63.6
FvH4_1g11930 Fragaria vesca HOM05D006394 ORTHO05D008057 8.4e-92 341.3 286 67.1
FAN26G2471 Fragaria x ananassa HOM05D006394 ORTHO05D008057 1.9e-91 340.1 286 67.1
FAN19G0259 Fragaria x ananassa HOM05D006394 ORTHO05D008057 2.7e-90 336.3 286 66.4
Dinv33624 Davidia involucrata HOM05D006394 ORTHO05D008057 3.9e-89 332.4 271 70.5
Cc07_g10630 Coffea canephora HOM05D006394 ORTHO05D008057 4.3e-88 328.9 293 63.5
FAN28G2242 Fragaria x ananassa HOM05D006394 ORTHO05D008057 9.7e-88 327.8 286 66.1
Peaxi162Scf00034g02720 Petunia axillaris HOM05D006394 ORTHO05D008057 6.9e-86 321.6 301 64.1
FAN23G1778 Fragaria x ananassa HOM05D006394 ORTHO05D008057 1.2e-85 320.9 286 65.4
HanXRQChr14g0441351 Helianthus annuus HOM05D006394 ORTHO05D008057 2.0e-85 320.1 288 64.6
ClCG01G020230 Citrullus lanatus HOM05D006394 ORTHO05D008057 1.7e-84 317.0 271 57.9
CAN.G1735.1 Capsicum annuum HOM05D006394 ORTHO05D008057 6.5e-84 315.1 293 63.5
Solyc03g033560.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 2.1e-82 310.1 293 64.2
PSO541G5117 Papaver somniferum HOM05D006394 ORTHO05D008057 3.6e-82 309.3 302 60.6
PSO675G2528 Papaver somniferum HOM05D006394 ORTHO05D008057 3.6e-82 309.3 297 61.6
Sed0000291 Sechium edule HOM05D006394 ORTHO05D008057 3.6e-82 309.3 271 56.1
MD02G1133300 Malus domestica HOM05D006394 ORTHO05D008057 4.6e-82 308.9 272 56.2
Sopen03g006350 Solanum pennellii HOM05D006394 ORTHO05D008057 4.6e-82 308.9 293 63.8
Nitab4.5_0006119g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 1.4e-81 307.4 301 62.8
Hma1.2p1_0743F.1_g211600 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 2.3e-81 306.6 272 57.0
DCAR_032392 Daucus carota HOM05D006394 ORTHO05D008057 3.9e-81 305.8 290 64.1
Nn6g32361 Nelumbo nucifera HOM05D006394 ORTHO05D008057 2.8e-79 299.7 306 60.8
Aqoxy2G01815 Aquilegia oxysepala HOM05D006394 ORTHO05D008057 5.3e-78 295.4 303 59.1
PGR102G2413 Punica granatum HOM05D006394 ORTHO05D008057 9.1e-78 294.7 289 63.3
Cpa.g.sc6.241 Carica papaya HOM05D006394 ORTHO05D008057 1.5e-77 293.9 272 55.5
ECA238G0838 Erigeron canadensis HOM05D006394 ORTHO05D008057 4.5e-77 292.4 295 60.7
Nitab4.5_0000438g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 4.5e-77 292.4 354 53.7
Lj2C467T3 Lonicera japonica HOM05D006394 ORTHO05D008057 1.2e-74 284.3 284 53.2
vmacro21917 Vaccinium macrocarpon HOM05D006394 ORTHO05D008057 1.6e-74 283.9 285 52.3
Sabra05G0094200 Salix brachista HOM05D006394 ORTHO05D008057 1.4e-73 280.8 272 51.5
CDE04G0153 Ceratophyllum demersum HOM05D006394 ORTHO05D008057 1.8e-73 280.4 306 56.5
Phvul.003G262300 Phaseolus vulgaris HOM05D006394 ORTHO05D008057 1.1e-72 277.7 204 63.7
CSS0039773 Camellia sinensis var. sinensis HOM05D006394 ORTHO05D008057 1.5e-72 277.3 280 52.5
MSTRG.2708 Avicennia marina HOM05D006394 ORTHO05D008057 2.6e-69 266.5 297 56.2
Manes.01G145300 Manihot esculenta HOM05D006394 ORTHO05D008057 4.2e-67 259.2 189 66.1
Hund16487 Selenicereus undatus HOM05D006394 ORTHO05D008057 2.1e-66 256.9 283 59.7
Sc16g0002110 Simmondsia chinensis HOM05D006394 ORTHO05D008057 2.1e-66 256.9 283 48.4
TPR.G30047 Trifolium pratense HOM05D006394 ORTHO05D008057 6.7e-65 251.9 281 47.3
TAR133G0002 Trochodendron aralioides HOM05D006394 ORTHO05D008057 2.0e-64 250.4 222 57.7
Actinidia28701 Actinidia chinensis HOM05D006394 ORTHO05D008057 4.4e-64 249.2 274 50.0
TAR365G0979 Trochodendron aralioides HOM05D006394 ORTHO05D008057 1.3e-63 247.7 227 57.3
SGA_v2.0_scaffold137G35082 Striga asiatica HOM05D006394 ORTHO05D008057 6.3e-63 245.4 293 54.6
EL10As8g23834 Beta vulgaris HOM05D006394 ORTHO05D008057 1.2e-61 241.1 286 54.5
THA.LOC104804261 Tarenaya hassleriana HOM05D006394 ORTHO05D008057 3.5e-61 239.6 284 56.0
Migut.H01156 Erythranthe guttata HOM05D006394 ORTHO05D008057 1.4e-57 227.6 303 54.1
AL3G51010 Arabidopsis lyrata HOM05D006394 ORTHO05D008057 4.0e-57 226.1 284 54.6
unitig_22.g6143 Utricularia gibba HOM05D006394 ORTHO05D008057 5.2e-57 225.7 282 52.8
AT2G17975 Arabidopsis thaliana HOM05D006394 ORTHO05D008057 8.8e-57 224.9 283 52.3
HPP92_007113 Vanilla planifolia HOM05D006394 ORTHO05D008057 1.2e-56 224.6 308 49.4
Hma1.2p1_0589F.1_g184775 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 9.8e-56 221.5 183 59.0
Thhalv10022807m.g Eutrema salsugineum HOM05D006394 ORTHO05D008057 1.7e-55 220.7 284 54.2
Sp3g31400 Schrenkiella parvula HOM05D006394 ORTHO05D008057 6.3e-55 218.8 284 54.2
BcaB03g16582 Brassica carinata HOM05D006394 ORTHO05D008057 1.8e-54 217.2 285 54.0
Aa31LG8G15150 Aethionema arabicum HOM05D006394 ORTHO05D008057 5.4e-54 215.7 284 51.8
PGSC0003DMG400022563 Solanum tuberosum HOM05D006394 ORTHO05D008057 3.5e-53 213.0 217 53.9
SalBow3G1310 Salvia bowleyana HOM05D006394 ORTHO05D008057 7.7e-53 211.8 293 42.3
CARHR108450 Cardamine hirsuta HOM05D006394 ORTHO05D008057 1.7e-52 210.7 284 51.8
C07p05000 Brassica napus HOM05D006394 ORTHO05D008057 6.5e-52 208.8 284 53.2
BcaC06g36350 Brassica carinata HOM05D006394 ORTHO05D008057 8.5e-52 208.4 284 53.2
BolC7t40901H Brassica oleracea HOM05D006394 ORTHO05D008057 9.4e-51 204.9 290 52.1
Carub.0003s3211 Capsella rubella HOM05D006394 ORTHO05D008057 1.6e-50 204.1 284 51.4
BraA07t28070Z Brassica rapa HOM05D006394 ORTHO05D008057 8.8e-49 198.4 290 51.4
A07p02700 Brassica napus HOM05D006394 ORTHO05D008057 1.2e-48 198.0 284 52.1
Lsat_1_v5_gn_4_146641 Lactuca sativa HOM05D006394 ORTHO05D008057 2.0e-40 170.6 284 39.8
Os04g0110600 Oryza sativa ssp. japonica HOM05D006394 ORTHO05D008057 3.7e-39 166.4 229 41.0
Zm00001eb418470 Zea mays HOM05D006394 ORTHO05D008057 1.2e-34 151.4 230 39.1
Zm00001eb411540 Zea mays HOM05D006394 ORTHO05D008057 2.6e-32 143.7 211 39.8
Zm00001eb089410 Zea mays HOM05D006394 ORTHO05D008057 2.2e-31 140.6 212 39.6
SMO347G0374 Selaginella moellendorffii HOM05D006394 ORTHO05D008057 4.1e-30 136.3 232 47.0
ATR0421G001 Amborella trichopoda HOM05D006394 ORTHO05D008057 5.4e-22 109.4 49 93.9
unitig_8.g2966 Utricularia gibba HOM05D006394 ORTHO05D008057 6.0e-21 105.9 238 32.4
CSS0034598 Camellia sinensis var. sinensis HOM05D006394 ORTHO05D008057 3.9e-20 103.2 48 89.6
Actinidia31001 Actinidia chinensis HOM05D006394 ORTHO05D008057 9.5e-19 98.6 115 48.7
Sopen04g013660 Solanum pennellii HOM05D006394 ORTHO05D008057 3.6e-18 96.7 96 54.2
MBI05_g15342_MAGBIO Magnolia biondii HOM05D006394 ORTHO05D008057 9.9e-16 88.6 89 50.6
Sopen04g013620 Solanum pennellii HOM05D006394 ORTHO05D008057 2.2e-15 87.4 78 55.1
Solyc10g038030.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 4.6e-13 79.7 114 42.1
ATR0421G002 Amborella trichopoda HOM05D006394 ORTHO05D008057 7.8e-13 79.0 120 40.0
ATR0853G001 Amborella trichopoda HOM05D006394 ORTHO05D008057 1.3e-12 78.2 91 50.5
HanXRQChr01g0002841 Helianthus annuus HOM05D006394 ORTHO05D008057 3.0e-12 77.0 75 49.3
Oeu048467.1 Olea europaea HOM05D006394 ORTHO05D008057 1.1e-11 75.1 90 42.2
CBR_g22407 Chara braunii HOM05D006394 ORTHO05D008057 6.8e-09 65.9 89 41.6
CDE02G2139 Ceratophyllum demersum HOM05D006394 ORTHO05D008057 1.7e-07 61.2 94 41.5
CBR_g82288 Chara braunii HOM05D006394 ORTHO05D008057 6.4e-07 59.3 32 68.8
DCAR_009202 Daucus carota HOM05D001564 ORTHO05D001439 1.1e-06 58.5 67 40.3
DCAR_009203 Daucus carota HOM05D001564 ORTHO05D001439 1.1e-06 58.5 67 40.3
MD02G1035800 Malus domestica HOM05D001564 ORTHO05D001439 3.2e-06 57.0 50 50.0
Lalb_Chr13g0301981 Lupinus albus HOM05D001564 ORTHO05D001439 5.4e-06 56.2 34 64.7


User provided reference genes

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