Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 6.2e-81 304.3 178 100.0
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 6.2e-65 251.1 180 88.3
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 3.2e-53 212.2 184 68.5
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 1.1e-40 170.6 184 56.5
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 7.9e-36 154.5 187 50.8
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 5.1e-35 151.8 186 51.1
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 8.7e-35 151.0 183 49.2
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 4.3e-34 148.7 178 62.4
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 5.7e-34 148.3 182 50.0
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.6e-33 146.7 187 49.7
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 6.3e-33 144.8 183 48.1
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 8.2e-33 144.4 181 47.5
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 1.8e-32 143.3 180 61.7
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 1.8e-32 143.3 188 48.9
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 4.1e-32 142.1 188 47.9
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 6.9e-32 141.4 194 56.2
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 9.0e-32 141.0 180 61.7
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.2e-31 140.6 187 49.2
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 1.5e-31 140.2 173 51.4
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 2.0e-31 139.8 182 57.1
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.0e-31 139.8 182 57.1
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.9e-31 138.3 182 57.1
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 7.6e-31 137.9 91 73.6
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 1.7e-30 136.7 184 48.9
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 1.4e-29 133.7 91 69.2
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.9e-29 133.3 182 56.0
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 2.5e-29 132.9 192 44.8
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 7.2e-29 131.3 170 44.7
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 9.3e-29 131.0 82 75.6
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.6e-28 130.2 84 71.4
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 3.6e-28 129.0 81 77.8
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 4.6e-28 128.6 175 46.9
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 7.9e-28 127.9 73 79.5
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 7.9e-28 127.9 73 79.5
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 7.9e-28 127.9 178 44.9
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 1.0e-27 127.5 80 75.0
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 1.3e-27 127.1 75 77.3
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.8e-27 126.7 149 58.4
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 1.8e-27 126.7 80 71.2
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 2.3e-27 126.3 168 45.8
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 3.0e-27 125.9 71 78.9
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 3.0e-27 125.9 161 44.7
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 5.1e-27 125.2 131 48.9
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 5.1e-27 125.2 181 53.0
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 6.7e-27 124.8 161 51.6
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 8.8e-27 124.4 81 69.1
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 8.8e-27 124.4 69 78.3
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 8.8e-27 124.4 174 42.0
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 1.5e-26 123.6 152 46.7
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 1.5e-26 123.6 69 76.8
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 1.9e-26 123.2 71 77.5
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 1.9e-26 123.2 70 78.6
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 2.5e-26 122.9 83 69.9
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 2.5e-26 122.9 83 69.9
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.5e-26 122.9 76 73.7
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 2.5e-26 122.9 81 72.8
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 2.5e-26 122.9 71 78.9
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 3.3e-26 122.5 71 77.5
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 5.7e-26 121.7 173 43.4
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 5.7e-26 121.7 86 67.4
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 5.7e-26 121.7 81 71.6
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 7.4e-26 121.3 85 64.7
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 7.4e-26 121.3 85 64.7
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 7.4e-26 121.3 89 62.9
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 7.4e-26 121.3 85 65.9
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 9.7e-26 120.9 76 71.1
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 9.7e-26 120.9 73 76.7
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 9.7e-26 120.9 73 76.7
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 1.3e-25 120.6 85 63.5
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.7e-25 120.2 85 64.7
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.7e-25 120.2 85 64.7
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.7e-25 120.2 85 64.7
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.7e-25 120.2 78 73.1
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 2.2e-25 119.8 88 62.5
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 2.8e-25 119.4 167 38.3
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 3.7e-25 119.0 73 68.5
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 6.3e-25 118.2 69 75.4
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 6.3e-25 118.2 70 74.3
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.2e-25 117.9 160 43.8
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.2e-25 117.9 160 43.8
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 1.1e-24 117.5 78 67.9
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 1.4e-24 117.1 70 74.3
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 1.8e-24 116.7 69 73.9
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 1.8e-24 116.7 87 65.5
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 5.9e-23 111.7 70 71.4
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 1.3e-22 110.5 169 44.4
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 1.3e-22 110.5 67 70.1
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 8.5e-22 107.8 66 75.8
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.1e-21 107.5 71 67.6
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 1.1e-21 107.5 71 67.6
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 3.2e-21 105.9 85 56.5
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 5.5e-21 105.1 158 41.1
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 1.6e-20 103.6 72 63.9
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.6e-20 103.6 158 40.5
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 2.3e-19 99.8 69 68.1
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 3.9e-19 99.0 89 56.2
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.1e-18 97.4 159 40.9
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 4.4e-18 95.5 79 59.5
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.5e-15 87.0 64 57.8
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 7.7e-07 58.2 60 40.0
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 1.7e-06 57.0 62 45.2


User provided reference genes

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