Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 0.0e+00 1282.3 647 100.0
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 0.0e+00 1145.6 647 90.3
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 2.3e-266 922.2 647 73.6
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 1.4e-260 902.9 658 73.4
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 1.3e-224 783.5 650 64.5
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 1.5e-222 776.5 656 62.5
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 1.7e-221 773.1 649 63.2
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 1.9e-220 769.6 649 63.5
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 5.1e-218 761.5 683 60.6
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 6.3e-216 754.6 650 61.5
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 5.9e-214 748.0 661 62.0
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 2.2e-213 746.1 653 61.9
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 6.5e-213 744.6 649 60.6
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 2.1e-211 739.6 651 62.8
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 2.6e-209 732.6 655 61.8
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.6e-209 732.6 654 60.9
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 1.3e-208 730.3 677 59.5
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 1.1e-207 727.2 654 60.7
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.4e-207 726.1 654 60.4
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 8.5e-205 717.6 665 58.3
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 1.2e-203 713.8 659 59.8
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.7e-203 712.6 655 59.7
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 3.6e-203 712.2 661 59.2
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 1.0e-202 710.7 649 58.4
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 1.0e-202 710.7 654 58.9
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 8.8e-202 707.6 672 58.3
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.1e-201 707.2 649 58.4
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 6.3e-200 701.4 624 61.5
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.1e-199 700.7 650 58.8
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.1e-199 700.7 650 58.9
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 1.8e-199 699.9 646 58.8
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 4.1e-199 698.7 627 60.0
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 5.3e-199 698.4 658 59.1
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 1.3e-197 693.7 654 57.2
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 3.1e-191 672.5 551 65.5
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 5.3e-191 671.8 656 57.5
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 1.9e-188 663.3 654 56.4
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 9.4e-188 661.0 672 56.0
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 4.7e-187 658.7 655 56.8
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 6.1e-187 658.3 655 54.2
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 3.0e-186 656.0 670 54.2
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 5.7e-185 651.7 657 55.3
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 2.4e-183 646.4 656 54.4
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 5.4e-183 645.2 651 53.9
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 3.5e-182 642.5 650 54.9
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 1.3e-181 640.6 605 57.9
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 1.7e-181 640.2 649 55.3
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 2.9e-181 639.4 652 54.0
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 2.3e-178 629.8 656 54.7
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 3.0e-178 629.4 558 58.4
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 3.4e-177 625.9 656 54.4
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 7.5e-177 624.8 651 54.2
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 8.3e-176 621.3 650 53.4
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.4e-175 619.8 654 54.7
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 5.4e-175 618.6 651 52.2
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 9.2e-175 617.8 645 53.8
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 1.3e-173 614.0 657 53.7
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 5.0e-173 612.1 646 51.5
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 1.6e-171 607.1 645 52.1
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 2.1e-171 606.7 611 54.3
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 1.8e-170 603.6 653 51.6
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 4.4e-169 599.0 640 52.8
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.3e-168 597.4 646 50.6
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 4.9e-168 595.5 689 51.2
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 2.4e-167 593.2 651 51.5
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 1.2e-166 590.9 631 52.0
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 1.3e-165 587.4 666 50.8
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 3.0e-165 586.3 606 53.8
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 5.0e-165 585.5 647 51.3
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 1.2e-163 580.9 584 53.6
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 4.7e-163 578.9 555 55.5
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 1.4e-162 577.4 649 50.8
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 8.9e-162 574.7 681 48.9
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 1.3e-160 570.9 650 49.8
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 2.4e-159 566.6 645 49.6
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 3.2e-159 566.2 578 52.6
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.0e-157 561.2 557 54.8
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 1.9e-156 557.0 715 47.7
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 2.1e-155 553.5 612 50.3
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 1.1e-154 551.2 660 48.9
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 1.1e-151 541.2 672 48.7
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 1.2e-150 537.7 673 48.6
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 2.1e-150 537.0 613 50.1
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 1.0e-149 534.6 612 49.7
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 5.1e-149 532.3 667 47.8
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 1.6e-147 527.3 642 48.0
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 2.1e-147 526.9 551 51.5
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 1.8e-146 523.9 662 47.1
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 2.4e-146 523.5 529 53.1
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.9e-141 506.1 420 61.7
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 6.6e-141 505.4 612 48.7
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 5.3e-138 495.7 601 49.1
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.7e-136 490.7 672 43.6
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 3.9e-133 479.6 656 44.4
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 1.1e-132 478.0 652 44.6
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 8.4e-128 461.8 439 54.7
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 5.1e-125 452.6 564 46.3
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 5.3e-98 362.8 452 46.7
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 2.5e-87 327.4 493 38.5
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 1.8e-82 311.2 586 35.2
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 1.1e-79 302.0 504 37.9
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 3.0e-77 293.9 675 34.1
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 4.4e-68 263.5 348 50.0
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 4.4e-68 263.5 208 64.9
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 1.9e-55 221.5 192 63.0
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 9.5e-55 219.2 387 36.7
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 4.1e-34 150.6 576 25.7
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 3.2e-26 124.4 123 54.5
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 1.3e-24 119.0 698 22.6
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 1.3e-24 119.0 449 25.6
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 6.6e-24 116.7 369 29.8
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.3e-23 114.4 136 50.0
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.3e-23 114.4 136 50.0
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.6e-22 112.1 136 50.0
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.6e-22 112.1 136 50.0
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 6.6e-16 90.1 66 66.7
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 4.5e-12 77.4 138 34.8
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 3.0e-08 64.7 203 28.1


User provided reference genes

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