Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 0.0e+00 1177.5 730 100.0
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 0.0e+00 1095.1 685 93.6
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 1.8e-243 846.3 710 74.1
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 6.2e-204 714.9 690 65.9
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 6.2e-204 714.9 690 65.9
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 1.1e-200 704.1 677 63.1
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 1.6e-199 700.3 746 65.4
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 1.8e-195 686.8 704 67.2
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 4.0e-195 685.6 698 67.0
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 1.2e-191 674.1 666 59.8
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 1.0e-190 671.0 672 65.2
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 1.3e-190 670.6 691 64.5
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 4.3e-189 665.6 673 60.2
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 2.1e-188 663.3 687 62.9
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 3.4e-186 656.0 695 58.0
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 1.9e-184 650.2 693 59.7
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 2.5e-181 639.8 701 60.5
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 6.3e-180 635.2 725 58.1
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 4.1e-179 632.5 689 59.2
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 2.6e-178 629.8 703 60.6
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 5.0e-177 625.5 700 56.7
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 6.5e-177 625.2 700 59.1
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 2.5e-176 623.2 705 58.9
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 3.2e-176 622.9 709 58.8
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 3.2e-176 622.9 656 63.0
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 2.4e-171 606.7 716 58.1
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 6.9e-171 605.1 669 60.7
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 1.2e-170 604.4 691 56.2
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 8.5e-169 598.2 709 60.2
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 1.1e-168 597.8 696 59.6
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 2.0e-165 587.0 517 63.8
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 7.4e-165 585.1 707 53.6
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 2.4e-163 580.1 722 57.2
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 2.6e-162 576.6 714 57.3
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 1.3e-161 574.3 696 56.0
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 1.3e-161 574.3 673 56.8
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 2.2e-161 573.5 699 56.9
Rhsim08G0030800 Rhododendron simsii HOM05D004723 ORTHO05D006176 2.2e-161 573.5 671 57.7
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 1.1e-160 571.2 716 56.7
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 4.2e-160 569.3 724 56.8
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 1.0e-158 564.7 718 57.7
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 1.4e-158 564.3 699 56.9
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 7.4e-157 558.5 667 57.6
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 2.2e-156 557.0 673 59.6
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 8.2e-156 555.1 707 55.6
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 1.8e-155 553.9 711 55.0
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 2.4e-155 553.5 672 54.8
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 4.1e-155 552.7 672 56.4
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 1.5e-152 544.3 704 54.8
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 3.6e-151 539.7 691 52.1
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 1.0e-150 538.1 703 56.2
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 4.4e-149 532.7 675 54.5
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 4.4e-149 532.7 683 53.7
Migut.F01827 Erythranthe guttata HOM05D004723 ORTHO05D006176 2.8e-148 530.0 514 59.5
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 2.4e-147 526.9 718 51.0
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 5.9e-146 522.3 670 54.8
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 7.7e-146 521.9 724 51.2
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 1.0e-145 521.5 747 48.3
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 5.0e-145 519.2 660 54.4
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 1.1e-144 518.1 696 50.0
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 3.6e-143 513.1 694 51.2
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 6.1e-143 512.3 701 51.5
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 1.0e-142 511.5 692 54.9
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 1.8e-142 510.8 697 49.6
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 1.8e-142 510.8 709 54.0
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 3.0e-142 510.0 675 54.8
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 3.0e-142 510.0 727 51.0
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 8.8e-142 508.4 718 53.9
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 1.5e-141 507.7 700 50.6
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 3.6e-135 486.5 712 49.6
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 3.0e-134 483.4 696 50.4
SGA_v2.0_scaffold111G31425 Striga asiatica HOM05D004723 ORTHO05D006176 2.6e-133 480.3 560 53.8
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 1.7e-132 477.6 742 49.1
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 3.7e-132 476.5 709 49.5
Dinv40130 Davidia involucrata HOM05D004723 ORTHO05D006176 5.9e-130 469.2 323 74.6
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 6.6e-129 465.7 656 52.1
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 6.6e-129 465.7 719 49.1
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 1.1e-128 464.9 527 53.7
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 2.8e-127 460.3 705 45.8
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 2.9e-124 450.3 513 54.8
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 1.6e-122 444.5 510 51.8
Gohir.1Z049627 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.0e-121 441.8 409 63.6
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 2.8e-119 433.7 685 48.2
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 2.3e-118 430.6 703 48.9
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 2.3e-118 430.6 535 50.5
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 3.4e-117 426.8 733 50.1
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 3.2e-115 420.2 713 49.8
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 9.2e-115 418.7 638 42.9
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 1.5e-112 411.4 517 49.5
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 3.3e-112 410.2 688 46.2
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 8.9e-110 402.1 719 46.3
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 5.8e-109 399.4 696 48.0
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 5.8e-109 399.4 364 65.9
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 9.9e-109 398.7 720 45.8
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 6.0e-106 389.4 684 47.8
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 7.8e-106 389.0 716 47.9
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 1.1e-104 385.2 690 47.1
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 4.3e-104 383.3 703 47.2
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 2.0e-101 374.4 733 38.3
CDE05G0976 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 4.9e-100 369.8 390 62.1
Zm00001eb323180 Zea mays HOM05D004723 ORTHO05D006176 1.6e-95 354.8 717 41.8
Os07g0531700 Oryza sativa ssp. japonica HOM05D004723 ORTHO05D006176 1.1e-94 352.1 692 45.8
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 3.4e-93 347.1 702 43.2
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 7.6e-93 345.9 629 39.4
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 4.6e-90 336.7 727 36.5
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 6.0e-90 336.3 619 39.4
TAR628G1016 Trochodendron aralioides HOM05D004723 ORTHO05D005421 5.3e-86 323.2 237 73.0
Pp3c17_7210 Physcomitrium patens HOM05D004723 ORTHO05D006176 3.2e-83 313.9 566 38.7
MD15G1238700 Malus domestica HOM05D004723 ORTHO05D006176 2.0e-77 294.7 350 61.7
Rhsim08G0030900 Rhododendron simsii HOM05D004723 ORTHO05D006176 1.7e-76 291.6 474 44.5
Mapoly0061s0018 Marchantia polymorpha HOM05D004723 ORTHO05D006176 1.9e-64 251.5 868 29.8
HPP92_019125 Vanilla planifolia HOM05D004723 ORTHO05D006176 2.8e-63 247.7 198 60.1
C03p39900 Brassica napus HOM05D004723 ORTHO05D006176 1.3e-60 238.8 195 63.6
CBR_g41392 Chara braunii HOM05D004723 ORTHO05D006176 5.1e-57 226.9 701 31.8
MD15G1238600 Malus domestica HOM05D004723 ORTHO05D006176 2.8e-55 221.1 276 55.1
COL.COLO4_34179 Corchorus olitorius HOM05D004723 ORTHO05D006176 6.3e-55 219.9 515 35.7
Gohir.D04G039432 Gossypium hirsutum HOM05D004723 ORTHO05D006176 3.1e-54 217.6 273 54.2
COL.COLO4_33606 Corchorus olitorius HOM05D004723 ORTHO05D006176 1.6e-50 205.3 247 56.7
TPR.G3121 Trifolium pratense HOM05D004723 ORTHO05D006176 2.5e-43 181.4 201 51.7
PRCOL_00004947 Prasinoderma coloniale HOM05D004723 ORTHO05D006176 2.1e-42 178.3 752 29.7
Cre10.g452500 Chlamydomonas reinhardtii HOM05D004723 ORTHO05D006176 6.1e-42 176.8 427 34.0
HPP92_019124 Vanilla planifolia HOM05D004723 ORTHO05D006176 2.6e-40 171.4 254 47.6
CDE05G0343 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 4.8e-39 167.2 259 45.6
MCO13G085 Micromonas commoda HOM05D004723 ORTHO05D006176 4.8e-39 167.2 892 28.8
BolC3t16253H Brassica oleracea HOM05D004723 ORTHO05D006176 5.3e-30 137.1 111 62.2
TPR.G21433 Trifolium pratense HOM05D004723 ORTHO05D006176 3.8e-28 131.0 185 48.6
Medtr3g107350 Medicago truncatula HOM05D004723 ORTHO05D006176 7.2e-27 126.7 273 39.2
Medtr3g107330 Medicago truncatula HOM05D004723 ORTHO05D006176 5.4e-22 110.5 99 51.5
Dinv40131 Davidia involucrata HOM05D004723 ORTHO05D006176 7.0e-22 110.2 119 56.3
TPR.G330 Trifolium pratense HOM05D004723 ORTHO05D006176 9.1e-22 109.8 281 31.7
TAR628G0893 Trochodendron aralioides HOM05D004723 ORTHO05D006176 1.6e-21 109.0 102 62.7
TPR.G36124 Trifolium pratense HOM05D004723 ORTHO05D006176 5.0e-20 104.0 83 62.7
AagrBONN_evm.TU.Sc2ySwM_117.2819 Anthoceros agrestis HOM05D004723 ORTHO05D006176 6.6e-20 103.6 347 31.1
GSVIVG01005594001 Vitis vinifera HOM05D004723 ORTHO05D006176 2.8e-18 98.2 196 48.5
Thhalv10017085m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 6.1e-18 97.1 166 42.8
Oeu046870.1 Olea europaea HOM05D004723 ORTHO05D006176 1.0e-17 96.3 150 44.0
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 2.8e-15 88.2 128 46.1
TPR.G29970 Trifolium pratense HOM05D004723 ORTHO05D006176 2.0e-13 82.0 72 59.7
GSVIVG01005388001 Vitis vinifera HOM05D004723 ORTHO05D006176 1.7e-12 79.0 71 59.2
BolC3t16252H Brassica oleracea HOM05D004723 ORTHO05D006176 2.3e-12 78.6 60 65.0
Lsat_1_v5_gn_5_164041 Lactuca sativa HOM05D004723 ORTHO05D006176 9.5e-11 73.2 214 30.8
Nn1g05556 Nelumbo nucifera HOM05D004723 ORTHO05D006176 2.1e-10 72.0 48 62.5
Actinidia28727 Actinidia chinensis HOM05D004723 ORTHO05D006176 1.8e-09 68.9 103 46.6
SEGI_25425 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 2.6e-08 65.1 69 44.9
Thecc.01G154900 Theobroma cacao HOM05D004723 ORTHO05D006176 3.4e-08 64.7 88 46.6
FAN17G1680 Fragaria x ananassa HOM05D032679 ORTHO05D022627 7.5e-08 63.5 77 42.9
FAN24G3340 Fragaria x ananassa HOM05D032679 ORTHO05D022627 7.5e-08 63.5 77 42.9
COL.COLO4_33622 Corchorus olitorius HOM05D004723 ORTHO05D006176 2.2e-07 62.0 71 50.7
C03p39770 Brassica napus HOM05D059891 ORTHO05D040930 2.9e-07 61.6 69 49.3
Eucgr.C02078 Eucalyptus grandis HOM05D000238 ORTHO05D010253 2.9e-07 61.6 41 65.9
FAN18G3965 Fragaria x ananassa HOM05D032679 ORTHO05D022627 3.7e-07 61.2 77 41.6
FAN22G1655 Fragaria x ananassa HOM05D002244 ORTHO05D035452 2.4e-06 58.5 60 45.0
FAN03G2005 Fragaria x ananassa HOM05D004723 ORTHO05D002269 9.2e-06 56.6 60 43.3


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