Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03698 Corylus avellana HOM05D005999 ORTHO05D003360 1.1e-171 607.1 442 100.0
Cfa007034 Carpinus fangiana HOM05D005999 ORTHO05D003360 3.6e-162 575.5 444 97.3
CiPaw.08G125500 Carya illinoinensis HOM05D005999 ORTHO05D003360 9.3e-94 348.2 306 62.7
QL06p052235 Quercus lobata HOM05D005999 ORTHO05D003360 5.4e-86 322.4 303 62.0
Prupe.7G175600 Prunus persica HOM05D005999 ORTHO05D003360 2.5e-83 313.5 298 60.7
RcHm_v2.0_Chr2g0098251 Rosa chinensis HOM05D005999 ORTHO05D003360 7.3e-83 312.0 287 61.0
MD15G1236900 Malus domestica HOM05D005999 ORTHO05D003360 7.6e-80 302.0 286 59.4
Manes.01G151300 Manihot esculenta HOM05D005999 ORTHO05D003360 7.6e-80 302.0 299 58.2
ClCG01G020640 Citrullus lanatus HOM05D005999 ORTHO05D003360 3.8e-79 299.7 268 57.8
Thecc.01G010800 Theobroma cacao HOM05D005999 ORTHO05D003360 1.4e-78 297.7 308 58.1
TWI73G0962 Tripterygium wilfordii HOM05D005999 ORTHO05D003360 1.9e-78 297.4 295 57.3
Eucgr.I02298 Eucalyptus grandis HOM05D005999 ORTHO05D003360 2.1e-77 293.9 297 58.2
MELO3C007947.2 Cucumis melo HOM05D005999 ORTHO05D003360 2.7e-77 293.5 238 61.3
Duzib147G0884 Durio zibethinus HOM05D005999 ORTHO05D003360 3.5e-77 293.1 301 57.8
CsaV3_6G047550 Cucumis sativus L. HOM05D005999 ORTHO05D003360 1.8e-76 290.8 287 54.7
arahy.Tifrunner.gnm1.ann1.74V199 Arachis hypogaea HOM05D005999 ORTHO05D003360 2.3e-76 290.4 300 54.0
arahy.Tifrunner.gnm1.ann1.JK0YGC Arachis hypogaea HOM05D005999 ORTHO05D003360 2.3e-76 290.4 300 54.0
PGR119G0821 Punica granatum HOM05D005999 ORTHO05D003360 3.9e-76 289.7 289 56.4
Lalb_Chr05g0212151 Lupinus albus HOM05D005999 ORTHO05D003360 5.1e-76 289.3 295 55.6
Duzib187G1063 Durio zibethinus HOM05D005999 ORTHO05D003360 1.9e-75 287.3 291 56.0
Potri.007G060400 Populus trichocarpa HOM05D005999 ORTHO05D003360 7.4e-75 285.4 290 56.2
Sed0006391 Sechium edule HOM05D005999 ORTHO05D003360 7.4e-75 285.4 284 54.9
FAN19G2768 Fragaria x ananassa HOM05D005999 ORTHO05D003360 1.6e-74 284.3 287 57.1
Gohir.A02G174800 Gossypium hirsutum HOM05D005999 ORTHO05D003360 2.1e-74 283.9 304 55.6
Potri.005G105800 Populus trichocarpa HOM05D005999 ORTHO05D003360 8.1e-74 282.0 288 56.6
GSVIVG01005198001 Vitis vinifera HOM05D005999 ORTHO05D003360 8.1e-74 282.0 301 54.8
Gohir.D03G005000 Gossypium hirsutum HOM05D005999 ORTHO05D003360 1.1e-73 281.6 302 55.3
Gorai.003G005300 Gossypium raimondii HOM05D005999 ORTHO05D003360 1.4e-73 281.2 299 55.9
Lj2g0014093 Lotus japonicus HOM05D005999 ORTHO05D003360 1.4e-73 281.2 296 54.7
Ciclev10025620m.g Citrus clementina HOM05D005999 ORTHO05D003360 1.8e-73 280.8 313 52.4
Atru.chr3.914 Acer truncatum HOM05D005999 ORTHO05D003360 2.6e-72 276.9 309 50.5
Atru.chr3.919 Acer truncatum HOM05D005999 ORTHO05D003360 2.6e-72 276.9 309 50.5
CANSAT25G3254 Cannabis sativa HOM05D005999 ORTHO05D003360 5.8e-72 275.8 301 52.5
FvH4_1g10990 Fragaria vesca HOM05D005999 ORTHO05D003360 5.8e-72 275.8 287 55.4
Sabra05G0086500 Salix brachista HOM05D005999 ORTHO05D003360 5.8e-72 275.8 287 55.7
THA.LOC104826498 Tarenaya hassleriana HOM05D005999 ORTHO05D003360 1.4e-70 271.2 279 53.8
Dinv08545 Davidia involucrata HOM05D005999 ORTHO05D003360 1.9e-70 270.8 321 52.3
Sc16g0001790 Simmondsia chinensis HOM05D005999 ORTHO05D003360 1.6e-69 267.7 293 51.2
TAR628G0133 Trochodendron aralioides HOM05D005999 ORTHO05D003360 1.6e-69 267.7 291 55.0
C09p12060 Brassica napus HOM05D005999 ORTHO05D003360 7.9e-69 265.4 266 53.0
CARHR281700 Cardamine hirsuta HOM05D005999 ORTHO05D003360 7.9e-69 265.4 288 51.0
BraA09t36663Z Brassica rapa HOM05D005999 ORTHO05D003360 1.0e-68 265.0 246 54.1
Carub.0008s2845 Capsella rubella HOM05D005999 ORTHO05D003360 1.0e-68 265.0 288 49.0
Ca_24948_v3 Cicer arietinum L. HOM05D005999 ORTHO05D003360 1.3e-68 264.6 293 50.9
BolC9t54096H Brassica oleracea HOM05D005999 ORTHO05D003360 1.8e-68 264.2 247 55.5
FAN23G1568 Fragaria x ananassa HOM05D005999 ORTHO05D003360 2.3e-68 263.8 290 53.4
A09p10170 Brassica napus HOM05D005999 ORTHO05D003360 5.1e-68 262.7 294 49.3
Thhalv10004296m.g Eutrema salsugineum HOM05D005999 ORTHO05D003360 1.1e-67 261.5 243 54.3
EL10Ac6g13337 Beta vulgaris HOM05D005999 ORTHO05D003360 2.5e-67 260.4 320 49.1
AL8G45550 Arabidopsis lyrata HOM05D005999 ORTHO05D003360 4.3e-67 259.6 291 49.1
BcaC04g23109 Brassica carinata HOM05D005999 ORTHO05D003360 7.4e-67 258.8 295 49.5
AT5G66055 Arabidopsis thaliana HOM05D005999 ORTHO05D003360 1.3e-66 258.1 292 47.9
Sp2g30630 Schrenkiella parvula HOM05D005999 ORTHO05D003360 2.1e-66 257.3 295 47.5
BcaB04g20127 Brassica carinata HOM05D005999 ORTHO05D003360 3.7e-66 256.5 282 51.4
Hma1.2p1_0315F.1_g122640 Hydrangea macrophylla HOM05D005999 ORTHO05D003360 4.8e-66 256.1 329 49.2
Medtr5g022050 Medicago truncatula HOM05D005999 ORTHO05D003360 4.1e-65 253.1 288 51.4
Glyma.01G161900 Glycine max HOM05D005999 ORTHO05D003360 4.5e-64 249.6 301 50.8
Phvul.002G104000 Phaseolus vulgaris HOM05D005999 ORTHO05D003360 2.2e-63 247.3 301 50.5
Cc01_g06010 Coffea canephora HOM05D005999 ORTHO05D003360 3.8e-63 246.5 314 46.8
Glyma.11G081800 Glycine max HOM05D005999 ORTHO05D003360 3.8e-63 246.5 303 50.2
Lj6A806T47 Lonicera japonica HOM05D005999 ORTHO05D003360 5.0e-63 246.1 318 48.1
Psat2g151600 Pisum sativum HOM05D005999 ORTHO05D003360 6.5e-63 245.7 290 49.7
Lalb_Chr16g0377331 Lupinus albus HOM05D005999 ORTHO05D003360 8.4e-63 245.4 291 49.1
PGSC0003DMG400008679 Solanum tuberosum HOM05D005999 ORTHO05D003360 8.4e-63 245.4 319 47.3
Nn6g31889 Nelumbo nucifera HOM05D005999 ORTHO05D003360 1.4e-62 244.6 308 50.6
Nitab4.5_0005409g0010 Nicotiana tabacum HOM05D005999 ORTHO05D003360 1.4e-62 244.6 318 48.1
CSS0035556 Camellia sinensis var. sinensis HOM05D005999 ORTHO05D003360 1.9e-62 244.2 313 47.3
Sopen02g012860 Solanum pennellii HOM05D005999 ORTHO05D003360 2.5e-62 243.8 320 47.2
Actinidia28736 Actinidia chinensis HOM05D005999 ORTHO05D003360 5.5e-62 242.7 311 48.2
PSO210G1231 Papaver somniferum HOM05D005999 ORTHO05D003360 7.1e-62 242.3 313 49.5
Aa31LG9G1330 Aethionema arabicum HOM05D005999 ORTHO05D003360 9.3e-62 241.9 283 47.7
Nitab4.5_0000188g0250 Nicotiana tabacum HOM05D005999 ORTHO05D003360 3.5e-61 240.0 318 47.2
TPR.G25134 Trifolium pratense HOM05D005999 ORTHO05D003360 7.9e-61 238.8 295 45.8
CSS0001074 Camellia sinensis var. sinensis HOM05D005999 ORTHO05D003360 1.0e-60 238.4 314 47.1
VMungo1215G1128 Vigna mungo HOM05D005999 ORTHO05D003360 2.3e-60 237.3 297 48.8
Solyc02g061820.4 Solanum lycopersicum HOM05D005999 ORTHO05D003360 3.0e-60 236.9 320 46.2
SGA_v2.0_scaffold58G20568 Striga asiatica HOM05D005999 ORTHO05D003360 6.7e-60 235.7 317 45.7
Lsat_1_v5_gn_4_143840 Lactuca sativa HOM05D005999 ORTHO05D003360 8.7e-60 235.3 307 46.6
PSO170G6629 Papaver somniferum HOM05D005999 ORTHO05D003360 1.1e-59 235.0 313 47.9
HanXRQChr09g0257041 Helianthus annuus HOM05D005999 ORTHO05D003360 4.3e-59 233.0 234 52.1
vmacro18444 Vaccinium macrocarpon HOM05D005999 ORTHO05D003360 3.7e-58 229.9 286 47.6
Ah.02g129080 Amaranthus hybridus HOM05D005999 ORTHO05D003360 6.3e-58 229.2 297 47.5
CAN.G865.12 Capsicum annuum HOM05D005999 ORTHO05D003360 1.8e-57 227.6 315 45.7
Hund16623 Selenicereus undatus HOM05D005999 ORTHO05D003360 1.8e-57 227.6 248 50.0
Aqoxy5G01092 Aquilegia oxysepala HOM05D005999 ORTHO05D002169 1.5e-56 224.6 321 44.9
MSTRG.3620 Avicennia marina HOM05D005999 ORTHO05D003360 1.0e-55 221.9 256 49.6
Migut.L00736 Erythranthe guttata HOM05D005999 ORTHO05D003360 1.7e-55 221.1 302 44.0
DCAR_011582 Daucus carota HOM05D005999 ORTHO05D003360 1.9e-54 217.6 306 47.1
HPP92_001740 Vanilla planifolia HOM05D005999 ORTHO05D003360 9.4e-54 215.3 265 45.7
CDE05G3499 Ceratophyllum demersum HOM05D005999 ORTHO05D003360 3.6e-53 213.4 234 50.9
Rhsim08G0029800 Rhododendron simsii HOM05D005999 ORTHO05D003360 5.1e-52 209.5 320 44.7
SalBow5G5732 Salvia bowleyana HOM05D005999 ORTHO05D003360 8.8e-52 208.8 318 43.1
MBI05_g32278_MAGBIO Magnolia biondii HOM05D005999 ORTHO05D003360 1.1e-51 208.4 348 42.0
COL.COLO4_22501 Corchorus olitorius HOM05D005999 ORTHO05D003360 3.1e-49 200.3 164 63.4
Glyma.11G081900 Glycine max HOM05D005999 ORTHO05D003360 5.3e-49 199.5 294 44.2
Medtr5g023090 Medicago truncatula HOM05D005999 ORTHO05D003360 1.5e-48 198.0 324 39.8
Phvul.002G103900 Phaseolus vulgaris HOM05D005999 ORTHO05D003360 6.1e-45 186.0 301 43.9
ATR0661G352 Amborella trichopoda HOM05D005999 ORTHO05D003360 5.1e-44 183.0 353 36.8
VMungo1215G2992 Vigna mungo HOM05D005999 ORTHO05D003360 8.2e-42 175.6 302 41.7
Os03g0135600 Oryza sativa ssp. japonica HOM05D005999 ORTHO05D003360 1.0e-39 168.7 290 41.4
Cpa.g.sc6.318 Carica papaya HOM05D005999 ORTHO05D003360 5.0e-39 166.4 184 54.3
ECA232G4368 Erigeron canadensis HOM05D005999 ORTHO05D003360 1.2e-37 161.8 163 50.9
Zm00001eb002820 Zea mays HOM05D005999 ORTHO05D003360 4.7e-37 159.8 240 40.8
PSO017G5004 Papaver somniferum HOM05D005999 ORTHO05D003360 1.6e-32 144.8 287 38.0
Oeu020651.1 Olea europaea HOM05D005999 ORTHO05D003360 2.6e-32 144.1 232 43.5
Cpa.g.sc6.319 Carica papaya HOM05D005999 ORTHO05D003360 5.0e-31 139.8 92 73.9
AUR62026216 Chenopodium quinoa HOM05D005999 ORTHO05D003360 1.5e-30 138.3 151 50.3
AUR62026380 Chenopodium quinoa HOM05D005999 ORTHO05D003360 3.2e-30 137.1 89 71.9
Peaxi162Scf00439g00012 Petunia axillaris HOM05D005999 ORTHO05D003360 1.8e-25 121.3 178 44.4
SalBow3G2044 Salvia bowleyana HOM05D005999 ORTHO05D003360 2.9e-15 87.4 122 38.5
Zm00001eb170850 Zea mays HOM05D005999 ORTHO05D003360 1.5e-14 85.1 74 56.8
Zm00001eb211570 Zea mays HOM05D005999 ORTHO05D003360 1.6e-13 81.6 58 63.8
SalBow6G0049 Salvia bowleyana HOM05D005999 ORTHO05D003360 4.7e-13 80.1 122 35.2
Zm00001eb242830 Zea mays HOM05D005999 ORTHO05D003360 6.1e-13 79.7 58 62.1
SalBow6G2335 Salvia bowleyana HOM05D002275 ORTHO05D003360 8.0e-13 79.3 122 36.1
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 1.4e-12 78.6 122 36.1
MD02G1122900 Malus domestica HOM05D005999 ORTHO05D003360 1.5e-11 75.1 64 60.9
Pp3c8_14440 Physcomitrium patens HOM05D005999 ORTHO05D003360 2.2e-10 71.2 241 26.1
CANSAT01G1435 Cannabis sativa HOM05D005999 ORTHO05D003360 4.9e-10 70.1 46 67.4
RcHm_v2.0_Chr1g0316981 Rosa chinensis HOM05D005999 ORTHO05D003360 9.2e-09 65.9 42 69.0
RcHm_v2.0_Chr1g0316921 Rosa chinensis HOM05D005999 ORTHO05D003360 3.9e-07 60.5 38 68.4


User provided reference genes

Program Settings