Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 3.7e-28 128.6 141 100.0
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 5.9e-26 121.3 64 96.9
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 1.2e-23 113.6 64 90.6
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 3.3e-21 105.5 64 82.8
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 1.3e-20 103.6 64 79.7
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 1.4e-19 100.1 64 82.8
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 5.9e-18 94.7 64 76.6
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 1.7e-17 93.2 64 76.6
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 2.9e-17 92.4 64 73.4
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 3.8e-17 92.0 64 73.4
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 6.5e-17 91.3 73 65.8
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 1.1e-16 90.5 56 78.6
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 1.1e-16 90.5 64 71.9
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 1.1e-16 90.5 64 71.9
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 1.9e-16 89.7 65 75.4
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 1.9e-16 89.7 65 73.8
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 2.5e-16 89.4 64 73.4
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 4.2e-16 88.6 65 72.3
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 5.5e-16 88.2 61 75.4
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 5.5e-16 88.2 62 74.2
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 5.5e-16 88.2 65 72.3
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 7.2e-16 87.8 65 72.3
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 9.4e-16 87.4 64 71.9
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 1.2e-15 87.0 65 70.8
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 1.6e-15 86.7 64 68.8
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 1.6e-15 86.7 53 79.2
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 1.6e-15 86.7 65 70.8
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 2.1e-15 86.3 64 70.3
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 2.7e-15 85.9 65 70.8
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 6.1e-15 84.7 64 71.9
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 7.9e-15 84.3 62 71.0
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 1.4e-14 83.6 61 70.5
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 1.4e-14 83.6 64 64.1
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 3.9e-14 82.0 64 68.8
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 3.9e-14 82.0 64 68.8
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 3.9e-14 82.0 65 66.2
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 3.9e-14 82.0 61 68.9
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 6.7e-14 81.3 64 65.6
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 8.8e-14 80.9 64 68.8
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 1.5e-13 80.1 61 72.1
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 1.5e-13 80.1 61 72.1
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 1.5e-13 80.1 59 74.6
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 2.0e-13 79.7 64 67.2
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 2.0e-13 79.7 64 68.8
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 2.0e-13 79.7 61 68.9
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 2.0e-13 79.7 65 64.6
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 3.3e-13 79.0 64 68.8
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 3.3e-13 79.0 55 69.1
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 3.3e-13 79.0 65 64.6
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 4.4e-13 78.6 64 62.5
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 4.4e-13 78.6 65 63.1
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 5.7e-13 78.2 62 61.3
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 9.7e-13 77.4 64 64.1
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 1.7e-12 76.6 61 68.9
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 1.7e-12 76.6 57 71.9
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 1.7e-12 76.6 64 62.5
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 2.2e-12 76.3 61 67.2
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 2.2e-12 76.3 67 59.7
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 3.7e-12 75.5 64 60.9
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 3.7e-12 75.5 64 60.9
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 6.3e-12 74.7 55 76.4
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 8.2e-12 74.3 59 64.4
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 1.8e-11 73.2 64 57.8
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 2.4e-11 72.8 65 61.5
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 3.1e-11 72.4 60 66.7
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 4.1e-11 72.0 64 59.4
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 4.1e-11 72.0 64 60.9
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 7.0e-11 71.2 65 61.5
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 7.0e-11 71.2 47 74.5
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 1.2e-10 70.5 65 60.0
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 1.2e-10 70.5 61 65.6
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 1.6e-10 70.1 54 72.2
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 1.6e-10 70.1 50 66.0
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 1.6e-10 70.1 65 60.0
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 2.6e-10 69.3 47 74.5
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 2.6e-10 69.3 65 60.0
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 2.6e-10 69.3 56 69.6
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 3.5e-10 68.9 47 74.5
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 3.5e-10 68.9 64 54.7
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 3.5e-10 68.9 64 57.8
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 3.5e-10 68.9 64 57.8
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 3.5e-10 68.9 64 57.8
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 3.5e-10 68.9 55 69.1
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 5.9e-10 68.2 64 59.4
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 7.7e-10 67.8 65 63.1
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 1.3e-09 67.0 50 64.0
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 2.2e-09 66.2 47 68.1
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 6.5e-09 64.7 47 68.1
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 6.5e-09 64.7 58 62.1
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 6.5e-09 64.7 58 62.1
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 6.5e-09 64.7 58 62.1
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 6.5e-09 64.7 57 63.2
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 6.5e-09 64.7 58 58.6
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 1.5e-08 63.5 51 68.6
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 2.5e-08 62.8 47 66.0
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 1.2e-07 60.5 48 70.8
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 1.2e-07 60.5 80 46.2
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 6.1e-07 58.2 49 53.1
Lj1A285T18 Lonicera japonica HOM05D007144 ORTHO05D008709 8.8e-06 54.3 37 78.4


User provided reference genes

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