Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 2.9e-88 328.6 167 100.0
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.1e-82 310.1 167 94.6
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 1.4e-58 229.9 165 73.9
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 3.1e-58 228.8 165 73.9
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.0e-57 226.1 165 71.5
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.6e-57 225.7 165 71.5
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 4.9e-56 221.5 165 70.9
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 6.4e-56 221.1 168 69.6
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 8.4e-56 220.7 165 72.1
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 5.5e-55 218.0 166 68.7
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.2e-54 216.9 167 68.9
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 1.6e-54 216.5 165 68.5
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 1.3e-53 213.4 161 71.4
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 2.3e-53 212.6 170 65.9
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 2.5e-52 209.1 167 66.5
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 2.5e-52 209.1 165 67.3
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 7.4e-52 207.6 165 65.5
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.3e-51 206.8 167 65.9
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.3e-51 206.8 165 64.2
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 3.7e-51 205.3 167 64.7
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 1.1e-50 203.8 165 63.6
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 1.4e-50 203.4 167 67.7
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 4.0e-50 201.8 169 62.7
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 5.3e-50 201.4 166 60.8
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 6.9e-50 201.1 165 64.2
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 4.5e-49 198.4 167 63.5
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 4.5e-49 198.4 162 64.2
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 7.6e-49 197.6 172 64.0
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 7.6e-49 197.6 165 63.0
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 1.0e-48 197.2 169 66.3
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.2e-48 196.1 162 63.6
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 2.2e-48 196.1 173 64.2
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.2e-48 196.1 164 62.2
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.9e-48 195.7 166 60.8
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 3.8e-48 195.3 166 60.2
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 6.5e-48 194.5 171 63.7
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 1.9e-47 193.0 165 63.0
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 4.2e-47 191.8 170 62.4
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 4.2e-47 191.8 181 63.0
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 9.3e-47 190.7 167 63.5
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 1.6e-46 189.9 166 62.0
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 3.5e-46 188.7 167 64.1
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 1.0e-45 187.2 169 60.4
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 1.3e-45 186.8 168 63.1
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.3e-45 186.8 166 63.9
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.5e-44 183.3 166 60.2
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.9e-44 183.0 170 61.2
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.9e-44 183.0 165 61.8
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 3.3e-44 182.2 167 59.3
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 4.3e-44 181.8 171 60.2
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 9.7e-44 180.6 165 60.0
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.3e-43 180.3 128 71.1
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 4.8e-43 178.3 165 61.2
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 6.3e-43 177.9 168 60.7
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 3.1e-42 175.6 160 61.9
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 9.0e-42 174.1 160 58.1
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 1.5e-41 173.3 165 58.2
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.5e-41 173.3 169 59.2
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.5e-41 173.3 164 60.4
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.0e-41 172.9 179 53.6
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.0e-41 172.9 164 57.3
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 2.6e-41 172.6 158 61.4
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 4.5e-41 171.8 168 60.7
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 5.9e-41 171.4 166 56.6
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 7.6e-41 171.0 167 53.9
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 1.0e-40 170.6 163 58.3
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.9e-40 169.1 169 59.8
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 2.9e-40 169.1 167 58.7
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 3.8e-40 168.7 165 57.6
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 5.0e-40 168.3 164 56.7
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 8.5e-40 167.5 159 61.0
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 1.4e-39 166.8 169 56.8
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 3.2e-39 165.6 160 56.2
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 9.3e-39 164.1 156 59.0
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 9.3e-39 164.1 148 60.8
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 9.3e-39 164.1 195 51.8
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 1.6e-38 163.3 156 57.1
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.1e-38 162.9 156 58.3
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.7e-38 162.5 165 56.4
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 2.7e-38 162.5 160 55.6
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.4e-37 160.2 160 56.2
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.4e-37 160.2 160 54.4
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 3.0e-37 159.1 156 54.5
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 6.7e-37 157.9 161 54.7
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 2.5e-36 156.0 160 53.1
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.3e-36 155.2 163 52.1
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 7.4e-36 154.5 156 53.2
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.8e-35 152.5 91 85.7
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 4.8e-35 151.8 187 49.2
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 6.3e-35 151.4 159 54.1
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 6.3e-35 151.4 167 53.3
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 6.3e-35 151.4 165 53.3
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 1.1e-34 150.6 143 58.0
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 3.1e-34 149.1 157 53.5
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 3.1e-34 149.1 162 54.9
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 5.3e-34 148.3 146 56.2
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 6.9e-34 147.9 158 54.4
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.2e-33 147.1 158 54.4
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.2e-33 147.1 162 50.0
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 3.4e-33 145.6 159 52.8
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.4e-33 145.6 166 50.0
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 1.7e-32 143.3 159 50.3
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 2.9e-32 142.5 159 51.6
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 2.9e-32 142.5 148 51.4
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 3.8e-32 142.1 159 51.6
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 5.0e-32 141.7 159 51.6
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 6.5e-32 141.4 157 52.9
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 8.5e-32 141.0 150 50.0
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 8.5e-32 141.0 156 55.1
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 1.1e-31 140.6 159 50.9
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 1.1e-31 140.6 159 50.9
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 1.4e-31 140.2 159 51.6
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.2e-31 139.0 167 48.5
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 5.5e-31 138.3 145 55.2
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 7.2e-31 137.9 159 50.9
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.2e-30 137.1 161 51.6
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 4.7e-30 135.2 159 48.4
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.0e-29 134.0 159 49.7
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 1.4e-29 133.7 138 55.1
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 2.3e-29 132.9 162 51.9
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 2.3e-29 132.9 161 50.3
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 2.3e-29 132.9 162 51.9
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 3.0e-29 132.5 142 51.4
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 5.1e-29 131.7 151 53.0
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 1.1e-28 130.6 136 55.1
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 2.6e-28 129.4 159 45.9
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 4.4e-28 128.6 140 55.7
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 7.4e-28 127.9 140 50.7
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 1.3e-27 127.1 159 49.1
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 1.3e-27 127.1 159 47.2
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.7e-27 126.7 149 49.0
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 6.3e-27 124.8 125 54.4
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 6.3e-27 124.8 140 49.3
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 1.4e-26 123.6 154 48.1
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 1.4e-26 123.6 157 45.2
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 1.8e-26 123.2 131 48.9
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 6.5e-24 114.8 162 43.8
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 7.2e-23 111.3 159 43.4
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 9.4e-23 110.9 125 50.4
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 3.6e-22 109.0 164 40.2
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.0e-22 107.8 92 62.0
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.0e-22 107.8 92 62.0
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 1.0e-21 107.5 145 46.2
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 4.4e-20 102.1 119 48.7
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 1.7e-19 100.1 155 45.2
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.2e-19 99.8 155 45.2
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 8.2e-19 97.8 155 45.2
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 1.8e-18 96.7 155 46.5
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.1e-18 95.5 155 44.5
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.1e-18 95.5 155 44.5
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 5.3e-18 95.1 110 50.0
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 9.1e-18 94.4 78 62.8
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 1.2e-17 94.0 93 55.9
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 2.5e-15 86.3 70 64.3
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 6.1e-14 81.6 141 34.0
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 6.7e-13 78.2 155 38.1
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 8.8e-13 77.8 87 52.9
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.8e-11 72.0 69 50.7
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.4e-10 70.5 84 48.8
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 1.4e-10 70.5 73 47.9
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 1.5e-07 60.5 61 50.8
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 1.5e-07 60.5 77 49.4
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.5e-07 60.5 53 54.7
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.5e-07 60.5 53 54.7
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 2.5e-07 59.7 60 51.7
DCAR_023429 Daucus carota HOM05D057861 ORTHO05D004842 3.2e-07 59.3 145 28.3
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 4.2e-07 58.9 61 49.2
Ciclev10023033m.g Citrus clementina HOM05D004226 ORTHO05D004842 9.4e-07 57.8 60 55.0
FAN06G1571 Fragaria x ananassa HOM05D020336 ORTHO05D022570 2.7e-06 56.2 142 28.9
FAN10G0857 Fragaria x ananassa HOM05D020336 ORTHO05D022570 8.0e-06 54.7 130 29.2


User provided reference genes

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