Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 7.2e-130 467.2 233 100.0
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 6.0e-76 288.1 222 70.7
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 2.6e-71 272.7 221 64.3
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.7e-70 270.0 213 67.6
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.4e-69 266.9 194 68.0
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 1.9e-69 266.5 200 66.0
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.7e-67 260.0 187 69.5
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 6.6e-67 258.1 222 64.0
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 1.1e-66 257.3 186 69.9
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.9e-66 256.5 211 66.4
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 7.3e-66 254.6 187 70.1
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 7.3e-66 254.6 196 65.8
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 9.6e-66 254.2 190 69.5
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 1.6e-65 253.4 182 68.1
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 4.8e-65 251.9 197 62.9
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 4.8e-65 251.9 199 66.8
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 6.2e-65 251.5 182 67.6
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 3.1e-64 249.2 202 61.9
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 5.3e-64 248.4 209 65.1
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 9.0e-64 247.7 206 66.0
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 1.5e-63 246.9 184 69.0
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 9.9e-63 244.2 226 59.7
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 4.9e-62 241.9 227 61.2
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 4.9e-62 241.9 182 67.6
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 8.4e-62 241.1 182 67.0
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 8.4e-62 241.1 237 58.2
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 8.4e-62 241.1 182 67.0
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.1e-61 240.7 205 62.0
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 1.9e-61 240.0 182 68.1
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 4.2e-61 238.8 205 62.0
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 4.2e-61 238.8 205 61.5
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 4.2e-61 238.8 176 68.2
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 7.1e-61 238.0 190 63.2
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 9.3e-61 237.7 177 66.1
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 9.3e-61 237.7 211 57.3
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 9.3e-61 237.7 187 64.2
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 2.1e-60 236.5 192 61.5
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 2.7e-60 236.1 229 58.1
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 3.5e-60 235.7 178 67.4
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 4.6e-60 235.3 181 65.2
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 6.0e-60 235.0 208 57.7
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 7.9e-60 234.6 195 59.5
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 1.0e-59 234.2 220 55.5
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.0e-59 234.2 228 56.1
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 3.3e-58 229.2 204 57.8
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 9.6e-58 227.6 183 61.2
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 2.1e-57 226.5 194 57.7
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 2.1e-57 226.5 188 61.7
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 6.2e-57 224.9 249 54.2
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 1.8e-56 223.4 183 61.2
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 2.4e-56 223.0 183 61.2
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 3.1e-56 222.6 190 58.4
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 9.0e-56 221.1 183 61.2
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 9.0e-56 221.1 196 60.7
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 2.0e-55 219.9 194 60.3
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 2.6e-55 219.5 167 62.9
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 4.5e-55 218.8 190 58.4
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.7e-54 216.9 183 61.2
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 2.9e-54 216.1 184 60.3
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 2.9e-54 216.1 185 59.5
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 4.9e-54 215.3 183 61.7
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 4.9e-54 215.3 183 61.7
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 6.4e-54 214.9 193 56.5
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 8.4e-54 214.5 183 61.7
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 8.4e-54 214.5 185 59.5
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.1e-53 214.2 190 58.9
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 4.2e-53 212.2 190 58.4
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 4.2e-53 212.2 183 60.7
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 9.3e-53 211.1 183 60.1
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 9.3e-53 211.1 183 60.1
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 2.1e-52 209.9 186 59.7
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 2.7e-52 209.5 187 57.2
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 3.5e-52 209.1 197 58.9
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 4.6e-52 208.8 178 61.2
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 4.6e-52 208.8 192 57.8
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 4.6e-52 208.8 189 58.2
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 7.9e-52 208.0 187 58.3
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 7.9e-52 208.0 190 57.9
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.0e-51 207.6 183 56.8
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 1.8e-51 206.8 198 56.6
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 3.0e-51 206.1 259 45.9
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 6.7e-51 204.9 200 56.5
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 1.5e-50 203.8 165 60.0
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 2.1e-49 199.9 168 59.5
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 4.8e-49 198.7 165 57.6
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 6.2e-49 198.4 143 68.5
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.5e-42 177.2 166 61.4
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.8e-41 172.2 171 50.3
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 4.8e-41 172.2 174 54.6
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 8.2e-41 171.4 147 58.5
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 2.4e-40 169.9 143 62.9
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 4.1e-40 169.1 170 52.9
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.9e-39 165.2 165 54.5
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 5.9e-39 165.2 163 54.0
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 5.0e-38 162.2 224 44.6
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 5.5e-37 158.7 106 68.9
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.2e-36 157.5 167 50.3
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 4.8e-33 145.6 172 47.7
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.8e-32 143.7 162 50.0
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.2e-28 131.0 83 71.1
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 6.1e-28 128.6 80 80.0
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.9e-28 128.3 113 57.5
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 4.8e-25 119.0 197 40.6
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 1.5e-13 80.9 159 34.0
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.1e-12 77.0 117 41.9
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.4e-11 74.3 47 66.0
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 2.2e-09 67.0 52 57.7
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 7.7e-07 58.5 92 47.8
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.3e-06 57.8 41 58.5


User provided reference genes

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