Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 4.1e-153 544.7 268 100.0
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 2.4e-81 306.2 310 55.8
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 4.8e-77 292.0 309 56.6
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 5.5e-73 278.5 309 53.1
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 8.7e-71 271.2 277 54.9
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 5.6e-70 268.5 314 50.3
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.3e-69 267.3 318 49.4
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 3.1e-68 262.7 306 48.4
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 4.0e-68 262.3 304 50.3
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.2e-67 260.8 299 48.5
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.0e-66 257.7 271 53.9
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.3e-66 257.3 311 51.4
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.7e-66 256.9 312 48.7
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 2.2e-66 256.5 268 52.6
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 2.9e-66 256.1 265 54.0
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 2.9e-66 256.1 277 50.9
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 4.9e-66 255.4 253 54.5
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.9e-66 255.4 312 49.0
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 4.9e-66 255.4 312 49.0
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 6.5e-66 255.0 268 52.6
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 8.4e-66 254.6 306 50.3
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 8.4e-66 254.6 250 55.6
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 8.4e-66 254.6 278 51.8
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.1e-65 254.2 313 49.2
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 1.4e-65 253.8 307 49.5
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.4e-65 253.8 305 49.8
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.9e-65 253.4 308 49.4
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 1.9e-65 253.4 240 57.5
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.9e-65 253.4 268 53.0
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 3.2e-65 252.7 251 55.8
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 3.2e-65 252.7 307 48.2
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 3.2e-65 252.7 282 49.3
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 9.3e-65 251.1 270 52.2
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.2e-64 250.8 312 48.4
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 4.6e-64 248.8 318 47.2
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 7.9e-64 248.1 260 54.2
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.3e-63 247.3 270 51.9
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 8.7e-63 244.6 290 48.6
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.1e-62 244.2 253 53.4
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.5e-62 243.8 256 53.1
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 1.5e-62 243.8 312 48.1
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 3.3e-62 242.7 312 45.5
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 5.7e-62 241.9 305 46.9
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 7.4e-62 241.5 253 51.0
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 9.7e-62 241.1 302 50.3
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.3e-61 240.7 260 50.0
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 1.3e-61 240.7 269 48.0
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.8e-61 238.8 247 53.8
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.8e-60 236.9 312 46.2
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 3.4e-59 232.6 253 50.2
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.5e-59 232.3 276 49.3
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 4.5e-59 232.3 251 50.6
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.3e-58 230.7 311 45.0
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.3e-58 230.7 253 51.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.7e-58 230.3 253 49.0
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.2e-58 229.9 266 48.5
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.9e-58 229.6 252 49.6
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 2.9e-58 229.6 266 48.5
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 6.5e-58 228.4 252 49.2
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.4e-57 227.3 257 49.8
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.4e-57 227.3 259 49.4
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.5e-57 226.5 266 48.1
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 2.5e-57 226.5 253 49.4
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 4.2e-57 225.7 255 50.6
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 5.5e-57 225.3 253 49.8
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 7.2e-57 224.9 329 42.6
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 2.1e-56 223.4 252 52.4
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 2.7e-56 223.0 197 60.9
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 3.6e-56 222.6 200 58.0
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 7.9e-56 221.5 258 49.6
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 7.9e-56 221.5 258 49.2
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 1.0e-55 221.1 292 45.2
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 1.0e-55 221.1 292 45.2
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.0e-55 221.1 301 44.9
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 1.8e-55 220.3 247 49.0
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 2.3e-55 219.9 256 48.8
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.3e-55 219.9 230 53.5
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 5.1e-55 218.8 201 58.2
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 6.7e-55 218.4 251 49.0
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 8.8e-55 218.0 260 47.3
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 1.1e-54 217.6 208 55.8
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.5e-54 217.2 252 50.0
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 3.3e-54 216.1 256 48.4
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 7.4e-54 214.9 297 43.4
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.1e-52 211.1 295 44.4
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.1e-52 211.1 301 41.5
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 3.1e-52 209.5 257 47.1
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 4.2e-49 199.1 260 43.5
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 6.1e-48 195.3 297 40.4
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.8e-47 193.7 232 49.6
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 1.5e-46 190.7 203 50.2
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 4.4e-46 189.1 255 43.5
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.7e-45 187.2 252 41.3
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 3.8e-42 176.0 201 44.8
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 5.7e-38 162.2 166 52.4
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 6.3e-37 158.7 149 57.0
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 3.1e-36 156.4 251 41.8
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 7.0e-36 155.2 138 58.7
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 7.2e-33 145.2 176 52.3
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 8.0e-32 141.7 79 81.0
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.8e-31 140.6 191 45.0
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.1e-28 131.3 138 50.0
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.4e-28 130.2 357 29.7
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 3.1e-28 129.8 69 87.0
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.7e-27 126.7 69 85.5
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 2.2e-26 123.6 68 83.8
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.9e-25 120.6 69 81.2
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 5.2e-23 112.5 91 61.5
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.4e-20 103.6 59 83.1
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.2e-16 91.3 60 71.7
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.7e-16 89.4 56 75.0
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 6.1e-16 89.0 101 49.5
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 4.5e-11 72.8 41 80.5
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.3e-10 71.2 79 50.6
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.7e-10 70.9 39 71.8
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.7e-10 70.9 104 43.3
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 1.7e-10 70.9 44 77.3
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.3e-10 70.5 104 43.3
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 9.5e-09 65.1 37 78.4
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 4.0e-07 59.7 42 66.7
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.0e-06 57.4 112 36.6


User provided reference genes

Program Settings