Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03425 Corylus avellana HOM05D005413 ORTHO05D006536 2.5e-281 971.5 504 100.0
Cfa010502 Carpinus fangiana HOM05D005413 ORTHO05D006536 1.2e-97 361.3 332 62.3
Haze_03431 Corylus avellana HOM05D005413 ORTHO05D006536 4.6e-97 359.4 307 64.5
QL04p048808 Quercus lobata HOM05D005413 ORTHO05D006536 2.1e-62 244.2 355 43.9
TAR623G0045 Trochodendron aralioides HOM05D005413 ORTHO05D006536 7.2e-50 202.6 326 39.3
Sabra10G0191100 Salix brachista HOM05D005413 ORTHO05D006536 5.7e-47 193.0 320 39.4
Dinv04422 Davidia involucrata HOM05D005413 ORTHO05D006536 6.3e-46 189.5 338 39.1
Haze_15139 Corylus avellana HOM05D005413 ORTHO05D006536 4.2e-42 176.8 103 93.2
Potri.008G001700 Populus trichocarpa HOM05D005413 ORTHO05D006536 2.3e-40 171.0 332 35.5
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 6.7e-40 169.5 312 35.9
Potri.008G015500 Populus trichocarpa HOM05D005413 ORTHO05D006536 1.7e-38 164.9 332 34.9
Potri.010G244600 Populus trichocarpa HOM05D005413 ORTHO05D006536 1.4e-37 161.8 296 36.8
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 1.8e-37 161.4 305 34.4
Sabra08G0009400 Salix brachista HOM05D005413 ORTHO05D006536 2.4e-37 161.0 320 34.4
Hund06812 Selenicereus undatus HOM05D005413 ORTHO05D006536 2.4e-37 161.0 314 35.7
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 1.5e-36 158.3 319 35.7
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 1.7e-35 154.8 304 31.9
MBI15_g31416_MAGBIO Magnolia biondii HOM05D005413 ORTHO05D006536 2.2e-35 154.5 320 33.8
Thecc.10G119400 Theobroma cacao HOM05D005413 ORTHO05D006536 2.2e-35 154.5 332 35.2
Hma1.2p1_0098F.1_g048260 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 3.8e-35 153.7 193 47.2
GSVIVG01037530001 Vitis vinifera HOM05D005413 ORTHO05D006536 5.5e-34 149.8 305 33.1
Sc09g0004800 Simmondsia chinensis HOM05D005413 ORTHO05D006536 2.1e-33 147.9 332 33.7
TAR633G2414 Trochodendron aralioides HOM05D005413 ORTHO05D006536 3.6e-33 147.1 179 46.4
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 4.7e-33 146.7 317 31.5
CSS0050484 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 3.0e-32 144.1 335 33.7
TWI79G1192 Tripterygium wilfordii HOM05D005413 ORTHO05D006536 3.0e-32 144.1 202 42.1
Aqoxy1G00612 Aquilegia oxysepala HOM05D005413 ORTHO05D006536 2.0e-31 141.4 324 34.6
FAN16G0400 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.0e-31 141.4 320 32.2
FAN16G2334 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.0e-31 141.4 320 32.2
Lj2A950G18 Lonicera japonica HOM05D005413 ORTHO05D006536 7.4e-31 139.4 192 43.2
Actinidia11676 Actinidia chinensis HOM05D005413 ORTHO05D006536 2.2e-30 137.9 317 30.9
Gohir.D05G079900 Gossypium hirsutum HOM05D005413 ORTHO05D006536 2.8e-30 137.5 323 31.0
AUR62024117 Chenopodium quinoa HOM05D005413 ORTHO05D006536 6.3e-30 136.3 318 32.7
Gorai.009G081500 Gossypium raimondii HOM05D005413 ORTHO05D006536 6.3e-30 136.3 323 30.7
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 1.1e-29 135.6 315 30.8
Atru.chr3.3078 Acer truncatum HOM05D005413 ORTHO05D006536 1.8e-29 134.8 306 34.3
Atru.chr3.3087 Acer truncatum HOM05D005413 ORTHO05D006536 1.8e-29 134.8 306 34.3
FAN11G2501 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.4e-29 134.4 314 30.9
Lj2C36T10 Lonicera japonica HOM05D005413 ORTHO05D006536 4.1e-29 133.7 325 34.2
Prupe.6G147200 Prunus persica HOM05D005413 ORTHO05D006536 7.0e-29 132.9 305 35.4
CsaV3_6G038630 Cucumis sativus L. HOM05D005413 ORTHO05D006536 9.1e-29 132.5 318 29.9
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 1.2e-28 132.1 317 29.7
MELO3C014525.2 Cucumis melo HOM05D005413 ORTHO05D006536 1.2e-28 132.1 318 29.9
Gohir.A05G077100 Gossypium hirsutum HOM05D005413 ORTHO05D006536 1.2e-28 132.1 332 30.7
FvH4_3g26150 Fragaria vesca HOM05D005413 ORTHO05D006536 2.0e-28 131.3 314 30.3
CiPaw.14G092700 Carya illinoinensis HOM05D005413 ORTHO05D006536 1.0e-27 129.0 184 41.8
Manes.11G103700 Manihot esculenta HOM05D005413 ORTHO05D006536 1.0e-27 129.0 309 31.4
MD11G1174800 Malus domestica HOM05D005413 ORTHO05D006536 1.7e-27 128.3 308 32.8
Dinv03807 Davidia involucrata HOM05D005413 ORTHO05D006536 2.2e-27 127.9 159 49.7
FAN25G1874 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.2e-27 127.9 314 30.3
Ca_19483_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 2.5e-26 124.4 306 31.7
Duzib170G0305 Durio zibethinus HOM05D005413 ORTHO05D006536 3.2e-26 124.0 210 38.1
Thecc.09G267600 Theobroma cacao HOM05D005413 ORTHO05D006536 3.2e-26 124.0 210 39.0
Lj3g0006130 Lotus japonicus HOM05D005413 ORTHO05D006536 5.5e-26 123.2 305 32.1
Oeu031446.2 Olea europaea HOM05D005413 ORTHO05D006536 2.1e-25 121.3 201 36.8
RcHm_v2.0_Chr5g0049091 Rosa chinensis HOM05D005413 ORTHO05D006536 2.1e-25 121.3 314 29.3
AUR62005613 Chenopodium quinoa HOM05D005413 ORTHO05D006536 3.6e-25 120.6 191 41.4
HPP92_015644 Vanilla planifolia HOM05D005413 ORTHO05D006536 3.6e-25 120.6 316 31.3
MD03G1159500 Malus domestica HOM05D005413 ORTHO05D006536 4.7e-25 120.2 320 33.8
vmacro07276 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 6.1e-25 119.8 140 46.4
Rhsim03G0094100 Rhododendron simsii HOM05D005413 ORTHO05D006536 1.4e-24 118.6 128 48.4
ClCG02G022490 Citrullus lanatus HOM05D005413 ORTHO05D006536 1.8e-24 118.2 318 28.9
Cc01_g07840 Coffea canephora HOM05D005413 ORTHO05D006536 3.0e-24 117.5 191 37.7
Eucgr.J00585 Eucalyptus grandis HOM05D005413 ORTHO05D006536 3.0e-24 117.5 201 35.8
Peaxi162Scf00429g00512 Petunia axillaris HOM05D005413 ORTHO05D006536 3.0e-24 117.5 192 37.0
Duzib168G1403 Durio zibethinus HOM05D005413 ORTHO05D006536 8.8e-24 115.9 210 37.6
EL10Ac6g13493 Beta vulgaris HOM05D005413 ORTHO05D006536 1.2e-23 115.5 311 31.5
Ah.03g136210 Amaranthus hybridus HOM05D005413 ORTHO05D006536 1.5e-23 115.2 312 31.1
COL.COLO4_00160 Corchorus olitorius HOM05D005413 ORTHO05D006536 2.0e-23 114.8 203 38.4
TPR.G10267 Trifolium pratense HOM05D005413 ORTHO05D006536 2.0e-23 114.8 230 33.5
VMungo1127G2102 Vigna mungo HOM05D005413 ORTHO05D006536 2.0e-23 114.8 191 44.0
Phvul.007G136700 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 3.3e-23 114.0 169 40.2
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 5.7e-23 113.2 324 27.2
Sopen11g029620 Solanum pennellii HOM05D005413 ORTHO05D006536 1.7e-22 111.7 200 35.0
Oeu033267.1 Olea europaea HOM05D005413 ORTHO05D006536 2.2e-22 111.3 208 38.0
Solyc11g071950.3 Solanum lycopersicum HOM05D005413 ORTHO05D006536 2.8e-22 110.9 200 35.0
MSTRG.12398 Avicennia marina HOM05D005413 ORTHO05D006536 4.8e-22 110.2 198 36.4
Lj5g0017620 Lotus japonicus HOM05D005413 ORTHO05D006536 4.8e-22 110.2 164 39.0
PGSC0003DMG400002998 Solanum tuberosum HOM05D005413 ORTHO05D006536 4.8e-22 110.2 200 34.5
SalBow6G6902 Salvia bowleyana HOM05D005413 ORTHO05D006536 6.3e-22 109.8 159 44.7
unitig_899.g15382 Utricularia gibba HOM05D005413 ORTHO05D006536 6.3e-22 109.8 199 36.2
Phvul.011G100200 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 8.2e-22 109.4 190 42.6
arahy.Tifrunner.gnm1.ann1.BD57S3 Arachis hypogaea HOM05D005413 ORTHO05D006536 1.1e-21 109.0 154 44.2
Lalb_Chr03g0028501 Lupinus albus HOM05D005413 ORTHO05D006536 1.1e-21 109.0 319 31.7
HanXRQChr05g0137071 Helianthus annuus HOM05D005413 ORTHO05D006536 1.8e-21 108.2 153 41.8
Psat7g200680 Pisum sativum HOM05D005413 ORTHO05D006536 1.8e-21 108.2 308 27.9
Ca_10423_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 2.4e-21 107.8 140 42.1
Medtr1g090350 Medicago truncatula HOM05D005413 ORTHO05D006536 2.4e-21 107.8 208 32.7
Lalb_Chr19g0136161 Lupinus albus HOM05D005413 ORTHO05D006536 3.1e-21 107.5 183 37.7
Medtr4g050330 Medicago truncatula HOM05D005413 ORTHO05D006536 4.1e-21 107.1 185 36.2
TPR.G4599 Trifolium pratense HOM05D005413 ORTHO05D006536 4.1e-21 107.1 190 35.8
arahy.Tifrunner.gnm1.ann1.0IPW5R Arachis hypogaea HOM05D005413 ORTHO05D006536 7.0e-21 106.3 184 39.7
Migut.D02382 Erythranthe guttata HOM05D005413 ORTHO05D006536 7.0e-21 106.3 127 44.9
vmacro14313 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 1.6e-20 105.1 371 25.6
ECA238G0598 Erigeron canadensis HOM05D005413 ORTHO05D006536 2.7e-20 104.4 181 38.1
Lalb_Chr21g0312751 Lupinus albus HOM05D005413 ORTHO05D006536 2.7e-20 104.4 140 42.1
Rhsim01G0199600 Rhododendron simsii HOM05D005413 ORTHO05D006536 2.7e-20 104.4 504 24.8
arahy.Tifrunner.gnm1.ann1.C0JSMI Arachis hypogaea HOM05D005413 ORTHO05D006536 4.5e-20 103.6 198 35.9
arahy.Tifrunner.gnm1.ann1.K4CWT5 Arachis hypogaea HOM05D005413 ORTHO05D006536 4.5e-20 103.6 198 35.9
DCAR_018207 Daucus carota HOM05D005413 ORTHO05D006536 5.9e-20 103.2 296 26.7
Nitab4.5_0000158g0110 Nicotiana tabacum HOM05D005413 ORTHO05D006536 5.9e-20 103.2 133 39.1
Thhalv10014324m.g Eutrema salsugineum HOM05D005413 ORTHO05D006536 7.7e-20 102.8 338 28.7
Rhsim01G0199900 Rhododendron simsii HOM05D005413 ORTHO05D006536 7.7e-20 102.8 417 24.0
Glyma.12G095900 Glycine max HOM05D005413 ORTHO05D006536 2.2e-19 101.3 190 40.5
Nitab4.5_0008364g0010 Nicotiana tabacum HOM05D005413 ORTHO05D006536 2.2e-19 101.3 217 31.3
Dinv33562 Davidia involucrata HOM05D005413 ORTHO05D006536 3.8e-19 100.5 204 29.9
PGR119G0748 Punica granatum HOM05D005413 ORTHO05D006536 1.1e-18 99.0 202 35.1
FAN21G0466 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.5e-18 98.6 319 26.6
Zm00001eb012330 Zea mays HOM05D005413 ORTHO05D006536 1.9e-18 98.2 200 35.5
Lsat_1_v5_gn_2_106300 Lactuca sativa HOM05D005413 ORTHO05D006536 4.2e-18 97.1 235 34.5
DCAR_012252 Daucus carota HOM05D005413 ORTHO05D006536 1.6e-17 95.1 331 26.9
Sed0018758 Sechium edule HOM05D005413 ORTHO05D006536 1.6e-17 95.1 131 41.2
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 2.7e-17 94.4 176 35.2
PSO339G2181 Papaver somniferum HOM05D005413 ORTHO05D006536 4.7e-17 93.6 145 42.1
PSO384G0849 Papaver somniferum HOM05D005413 ORTHO05D006536 8.0e-17 92.8 145 41.4
C03p12140 Brassica napus HOM05D005413 ORTHO05D006536 1.4e-16 92.0 217 32.7
BcaC01g06609 Brassica carinata HOM05D005413 ORTHO05D006536 1.8e-16 91.7 213 33.3
BolC3t13687H Brassica oleracea HOM05D005413 ORTHO05D006536 1.8e-16 91.7 213 33.3
CARHR191490 Cardamine hirsuta HOM05D005413 ORTHO05D006536 3.0e-16 90.9 333 24.9
BraA03t10367Z Brassica rapa HOM05D005413 ORTHO05D006536 6.8e-16 89.7 217 32.3
CDE07G0886 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 8.8e-16 89.4 122 40.2
A03p10550 Brassica napus HOM05D005413 ORTHO05D006536 1.5e-15 88.6 201 32.8
Sp6g23150 Schrenkiella parvula HOM05D005413 ORTHO05D006536 2.6e-15 87.8 343 25.4
Glyma.11G171773 Glycine max HOM05D005413 ORTHO05D006536 4.4e-15 87.0 203 38.9
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 5.7e-15 86.7 334 24.9
Os03g0274700 Oryza sativa ssp. japonica HOM05D005413 ORTHO05D006536 7.5e-15 86.3 204 30.4
Cpa.g.sc33.125 Carica papaya HOM05D005413 ORTHO05D006536 9.8e-15 85.9 81 54.3
SGA_v2.0_scaffold22G09835 Striga asiatica HOM05D005413 ORTHO05D006536 9.8e-15 85.9 110 43.6
Aa31LG1G13390 Aethionema arabicum HOM05D005413 ORTHO05D006536 6.3e-14 83.2 334 26.6
AL6G33000 Arabidopsis lyrata HOM05D005413 ORTHO05D006536 1.4e-13 82.0 222 27.0
Oeu029208.1 Olea europaea HOM05D005413 ORTHO05D006536 1.4e-13 82.0 81 46.9
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 3.1e-13 80.9 191 28.8
Carub.0006s1968 Capsella rubella HOM05D005413 ORTHO05D006536 7.0e-13 79.7 222 26.6
AT5G22040 Arabidopsis thaliana HOM05D005413 ORTHO05D006536 2.0e-12 78.2 216 27.8
THA.LOC104815083 Tarenaya hassleriana HOM05D005413 ORTHO05D006536 1.0e-11 75.9 292 30.8
Dinv03808 Davidia involucrata HOM05D005413 ORTHO05D006536 3.8e-11 73.9 63 57.1
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 1.9e-10 71.6 212 28.3
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 3.6e-09 67.4 89 38.2
Hma1.2p1_0298F.1_g117400 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 8.0e-09 66.2 85 42.4
BcaB01g04747 Brassica carinata HOM05D005413 ORTHO05D006536 1.0e-08 65.9 192 29.7
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 4.0e-08 63.9 91 38.5
PGR044G1324 Punica granatum HOM05D003044 ORTHO05D001869 8.3e-06 56.2 69 42.0


User provided reference genes

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