Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 2.2e-82 308.9 155 100.0
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 6.4e-50 201.1 107 92.5
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 1.8e-44 183.0 98 90.8
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 9.3e-33 144.1 99 73.7
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.6e-24 116.7 101 61.4
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 2.7e-24 115.9 102 58.8
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 2.7e-24 115.9 99 62.6
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 1.8e-23 113.2 109 54.1
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 2.3e-23 112.8 102 56.9
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 8.7e-23 110.9 106 54.7
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 1.5e-22 110.2 103 52.4
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 3.3e-22 109.0 114 52.6
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 4.8e-21 105.1 98 57.1
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 4.8e-21 105.1 102 54.9
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 1.4e-20 103.6 105 50.5
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 2.4e-20 102.8 99 53.5
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 3.1e-20 102.4 102 53.9
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 3.1e-20 102.4 102 52.9
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 4.0e-20 102.1 102 52.9
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 6.9e-20 101.3 105 52.4
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 6.9e-20 101.3 103 53.4
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 9.0e-20 100.9 103 52.4
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 1.2e-19 100.5 106 50.9
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 7.6e-19 97.8 103 53.4
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 1.0e-18 97.4 101 52.5
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 1.3e-18 97.1 98 50.0
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 6.5e-18 94.7 105 48.6
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.4e-17 93.6 103 48.5
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 5.5e-17 91.7 101 51.5
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 7.1e-17 91.3 104 47.1
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 3.5e-16 89.0 98 50.0
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 1.0e-15 87.4 98 48.0
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 1.3e-15 87.0 102 51.0
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 2.3e-15 86.3 99 48.5
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 3.0e-15 85.9 91 50.5
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 8.7e-15 84.3 68 61.8
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 8.7e-15 84.3 102 50.0
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 8.7e-15 84.3 66 57.6
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 1.9e-14 83.2 98 48.0
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 2.5e-14 82.8 102 46.1
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 3.3e-14 82.4 98 45.9
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.3e-14 82.0 98 44.9
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 9.7e-14 80.9 104 44.2
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 9.7e-14 80.9 98 44.9
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 9.7e-14 80.9 98 46.9
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.6e-13 80.1 102 42.2
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 2.2e-13 79.7 102 43.1
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 3.7e-13 79.0 98 45.9
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 4.8e-13 78.6 135 38.5
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 6.3e-13 78.2 99 46.5
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 1.1e-12 77.4 94 46.8
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 1.1e-12 77.4 99 40.4
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.4e-12 77.0 99 46.5
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 3.1e-12 75.9 93 48.4
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 3.1e-12 75.9 113 37.2
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 5.3e-12 75.1 93 45.2
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 5.3e-12 75.1 59 54.2
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 5.3e-12 75.1 96 44.8
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 9.0e-12 74.3 107 43.0
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 2.6e-11 72.8 93 41.9
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 3.4e-11 72.4 113 36.3
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 5.9e-11 71.6 102 39.2
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 2.2e-10 69.7 100 41.0
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 2.9e-10 69.3 98 40.8
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 3.8e-10 68.9 102 40.2
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 3.8e-10 68.9 98 41.8
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 3.8e-10 68.9 93 47.3
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 5.0e-10 68.6 94 41.5
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 8.5e-10 67.8 98 42.9
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 8.5e-10 67.8 110 40.0
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 2.5e-09 66.2 97 43.3
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 3.2e-09 65.9 77 46.8
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 5.5e-09 65.1 93 45.2
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 9.4e-09 64.3 92 41.3
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 1.6e-08 63.5 94 40.4
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 2.7e-08 62.8 94 40.4
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 4.6e-08 62.0 93 44.1
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 7.9e-08 61.2 99 44.4
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 1.4e-07 60.5 92 40.2
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.8e-07 60.1 99 36.4
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 5.1e-07 58.5 103 35.9
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 5.7e-06 55.1 112 33.9


User provided reference genes

Program Settings