Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03348 Corylus avellana HOM05D008362 ORTHO05D010554 1.1e-54 216.9 154 100.0
CiPaw.13G050500 Carya illinoinensis HOM05D008362 ORTHO05D010554 3.3e-22 109.0 102 62.7
QL09p049939 Quercus lobata HOM05D008362 ORTHO05D010554 5.6e-22 108.2 125 59.2
FAN15G1847 Fragaria x ananassa HOM05D008362 ORTHO05D010554 3.8e-10 68.9 91 56.0
MD05G1169400 Malus domestica HOM05D008362 ORTHO05D010554 6.4e-10 68.2 154 48.1
Cfa021480 Carpinus fangiana HOM05D008362 ORTHO05D010554 1.2e-08 63.9 34 100.0
FAN24G1934 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.2e-08 63.9 79 48.1
CANSAT01G1703 Cannabis sativa HOM05D008362 ORTHO05D010554 3.5e-08 62.4 99 53.5
PGSC0003DMG400020171 Solanum tuberosum HOM05D008362 ORTHO05D010554 6.0e-08 61.6 101 41.6
Potri.002G246900 Populus trichocarpa HOM05D008362 ORTHO05D010554 1.8e-07 60.1 96 50.0
Manes.13G051000 Manihot esculenta HOM05D008362 ORTHO05D010554 3.0e-07 59.3 81 55.6
Gohir.D07G096800 Gossypium hirsutum HOM05D008362 ORTHO05D010554 3.9e-07 58.9 34 94.1
Duzib211G0336 Durio zibethinus HOM05D008362 ORTHO05D010554 5.1e-07 58.5 34 91.2
Gohir.A07G092300 Gossypium hirsutum HOM05D008362 ORTHO05D010554 5.1e-07 58.5 34 91.2
Gorai.001G104200 Gossypium raimondii HOM05D008362 ORTHO05D010554 5.1e-07 58.5 34 91.2
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 5.1e-07 58.5 84 47.6
TPR.G28197 Trifolium pratense HOM05D008362 ORTHO05D010554 6.7e-07 58.2 34 97.1
CSS0045887 Camellia sinensis var. sinensis HOM05D008362 ORTHO05D010554 8.7e-07 57.8 32 90.6
Hma1.2p1_0226F.1_g095250 Hydrangea macrophylla HOM05D008362 ORTHO05D010554 8.7e-07 57.8 32 90.6
Nitab4.5_0002671g0030 Nicotiana tabacum HOM05D008362 ORTHO05D010554 1.5e-06 57.0 93 39.8
Medtr8g012580 Medicago truncatula HOM05D008362 ORTHO05D010554 1.9e-06 56.6 32 90.6
Sopen06g034630 Solanum pennellii HOM05D008362 ORTHO05D010554 1.9e-06 56.6 101 39.6
GSVIVG01006384001 Vitis vinifera HOM05D008362 ORTHO05D010554 1.9e-06 56.6 34 91.2
Psat4g204280 Pisum sativum HOM05D008362 ORTHO05D010554 2.5e-06 56.2 34 91.2
VMungo0331G0307 Vigna mungo HOM05D008362 ORTHO05D010554 3.3e-06 55.8 32 87.5
FAN27G1021 Fragaria x ananassa HOM05D008362 ORTHO05D010554 4.3e-06 55.5 34 88.2
Lalb_Chr07g0194111 Lupinus albus HOM05D008362 ORTHO05D010554 4.3e-06 55.5 34 94.1
Prupe.8G196600 Prunus persica HOM05D008362 ORTHO05D010554 4.3e-06 55.5 158 46.8
Solyc06g083250.4 Solanum lycopersicum HOM05D008362 ORTHO05D010554 4.3e-06 55.5 104 51.9
COL.COLO4_16103 Corchorus olitorius HOM05D008362 ORTHO05D010554 5.6e-06 55.1 76 51.3
Nn3g20067 Nelumbo nucifera HOM05D008362 ORTHO05D010554 5.6e-06 55.1 93 49.5
PGR083G0575 Punica granatum HOM05D008362 ORTHO05D010554 5.6e-06 55.1 31 87.1
Nitab4.5_0003020g0140 Nicotiana tabacum HOM05D008362 ORTHO05D010554 7.4e-06 54.7 90 40.0
TWI18G0011 Tripterygium wilfordii HOM05D008362 ORTHO05D010554 7.4e-06 54.7 33 84.8


User provided reference genes

Program Settings