Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 1.1e-124 449.9 223 100.0
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 7.2e-111 404.1 223 91.5
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 3.0e-85 318.9 228 73.7
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.6e-73 280.0 222 66.7
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 3.8e-72 275.4 222 67.1
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 1.1e-71 273.9 222 65.8
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 9.5e-71 270.8 225 66.2
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 1.2e-70 270.4 223 65.9
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 6.1e-70 268.1 225 65.3
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 4.0e-69 265.4 219 63.9
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 5.2e-69 265.0 219 68.9
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 2.6e-68 262.7 207 69.1
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 5.7e-68 261.5 217 63.1
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 9.8e-68 260.8 224 63.8
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 6.4e-67 258.1 217 61.3
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 6.4e-67 258.1 204 66.7
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 6.4e-67 258.1 225 62.2
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 8.3e-67 257.7 220 66.8
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 8.3e-67 257.7 226 62.8
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 1.1e-66 257.3 236 61.0
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 3.2e-66 255.8 225 61.8
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 3.2e-66 255.8 207 66.2
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 3.2e-66 255.8 208 64.9
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 4.1e-66 255.4 225 61.3
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 4.1e-66 255.4 206 66.0
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 7.0e-66 254.6 204 65.7
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 2.0e-65 253.1 200 66.5
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 3.5e-65 252.3 200 66.0
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 7.8e-65 251.1 200 65.5
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 3.0e-64 249.2 207 64.3
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 3.0e-64 249.2 200 65.5
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 3.0e-64 249.2 207 64.3
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 3.0e-64 249.2 220 65.9
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 8.6e-64 247.7 216 60.2
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 8.6e-64 247.7 205 62.0
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 8.6e-64 247.7 220 58.2
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 1.5e-63 246.9 219 59.8
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 2.5e-63 246.1 203 64.5
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 2.5e-63 246.1 199 64.8
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 4.3e-63 245.4 223 61.9
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 7.3e-63 244.6 225 60.0
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 2.1e-62 243.0 220 63.6
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 3.6e-62 242.3 216 63.9
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 3.6e-62 242.3 219 61.2
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 8.0e-62 241.1 216 63.9
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 8.0e-62 241.1 215 60.5
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 1.0e-61 240.7 221 57.9
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 1.8e-61 240.0 220 60.5
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 2.3e-61 239.6 216 60.6
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 3.1e-61 239.2 215 60.9
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 5.2e-61 238.4 206 59.7
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 6.8e-61 238.0 216 60.2
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 6.8e-61 238.0 241 53.9
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 1.5e-60 236.9 201 63.2
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 1.5e-60 236.9 220 56.8
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 2.6e-60 236.1 212 61.3
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 2.6e-60 236.1 217 59.0
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 4.4e-60 235.3 220 58.6
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 4.4e-60 235.3 215 60.0
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 9.8e-60 234.2 215 60.0
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 2.2e-59 233.0 213 59.2
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 6.4e-59 231.5 215 59.1
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 6.4e-59 231.5 213 58.7
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 8.3e-59 231.1 242 56.6
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 8.3e-59 231.1 215 59.1
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 1.1e-58 230.7 210 58.1
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 1.9e-58 229.9 223 57.8
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 1.9e-58 229.9 214 60.7
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 3.2e-58 229.2 224 56.2
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 4.1e-58 228.8 211 57.8
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 9.2e-58 227.6 242 55.8
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 1.3e-56 223.8 229 55.9
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 1.1e-55 220.7 227 56.4
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 7.3e-55 218.0 254 50.8
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 5.2e-53 211.8 214 53.7
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 1.2e-52 210.7 186 63.4
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 2.0e-52 209.9 208 54.3
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 3.4e-52 209.1 173 61.3
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 5.8e-52 208.4 160 66.2
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 6.4e-51 204.9 164 64.0
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 1.1e-50 204.1 212 59.0
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 1.9e-50 203.4 203 54.2
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 4.1e-50 202.2 161 66.5
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 9.2e-50 201.1 231 47.2
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 9.2e-50 201.1 219 52.5
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 1.6e-46 190.3 157 66.2
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 9.9e-44 181.0 157 65.0
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 6.4e-43 178.3 152 61.8
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 1.1e-42 177.6 178 57.3
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 3.2e-42 176.0 137 59.9
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 7.8e-41 171.4 156 55.1
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 2.3e-40 169.9 123 72.4
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 1.9e-39 166.8 293 38.6
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 1.2e-38 164.1 153 52.3
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 1.1e-37 161.0 100 82.0
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 4.0e-37 159.1 115 71.3
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 1.2e-36 157.5 291 38.1
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 7.6e-36 154.8 140 60.7
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 1.9e-34 150.2 156 50.6
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 5.4e-34 148.7 158 48.7
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 2.1e-30 136.7 114 65.8
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 1.5e-28 130.6 122 58.2
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 2.9e-27 126.3 174 46.6
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 4.2e-26 122.5 75 81.3
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 5.1e-24 115.5 224 37.5
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 4.3e-23 112.5 69 78.3
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 3.1e-21 106.3 152 42.1
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 1.3e-19 100.9 90 56.7
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 2.3e-16 90.1 111 48.6
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 1.5e-15 87.4 123 38.2
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 4.0e-13 79.3 67 61.2
CANSAT35G0509 Cannabis sativa HOM05D002397 ORTHO05D002667 7.4e-07 58.5 125 32.8
PSO675G0625 Papaver somniferum HOM05D002397 ORTHO05D002667 1.3e-06 57.8 149 26.8
PSO017G1677 Papaver somniferum HOM05D002397 ORTHO05D002667 1.6e-06 57.4 149 26.8
DCAR_001310 Daucus carota HOM05D002397 ORTHO05D009673 2.8e-06 56.6 131 30.5
Thecc.02G008600 Theobroma cacao HOM05D002397 ORTHO05D002667 4.8e-06 55.8 153 28.1
CBR_g50359 Chara braunii HOM05D002397 ORTHO05D002667 6.3e-06 55.5 135 30.4
COL.COLO4_17651 Corchorus olitorius HOM05D002397 ORTHO05D002667 6.3e-06 55.5 142 30.3
THA.LOC104812704 Tarenaya hassleriana HOM05D002397 ORTHO05D002667 6.3e-06 55.5 125 31.2
BcaB03g13805 Brassica carinata HOM05D002397 ORTHO05D002667 8.2e-06 55.1 125 31.2
Sp1g26980 Schrenkiella parvula HOM05D002397 ORTHO05D002667 8.2e-06 55.1 125 31.2


User provided reference genes

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