Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 2.0e-77 292.4 145 100.0
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 8.7e-33 144.1 87 73.6
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 6.2e-31 137.9 88 73.9
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 5.3e-30 134.8 81 75.3
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 5.8e-29 131.3 72 80.6
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 5.8e-29 131.3 73 80.8
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 2.2e-28 129.4 88 70.5
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 4.9e-28 128.3 74 74.3
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 4.9e-28 128.3 72 79.2
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 1.1e-27 127.1 74 79.7
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 1.1e-27 127.1 71 73.2
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 1.4e-27 126.7 72 79.2
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 1.4e-27 126.7 72 79.2
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 1.9e-27 126.3 81 71.6
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 2.4e-27 125.9 63 85.7
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 2.4e-27 125.9 72 79.2
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 4.2e-27 125.2 74 74.3
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 4.2e-27 125.2 68 80.9
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.5e-27 124.8 65 81.5
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 5.5e-27 124.8 65 81.5
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 5.5e-27 124.8 75 74.7
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 7.1e-27 124.4 74 75.7
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 7.1e-27 124.4 70 72.9
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 7.1e-27 124.4 71 73.2
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 9.3e-27 124.0 73 74.0
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.2e-26 123.6 61 86.9
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.2e-26 123.6 61 86.9
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.6e-26 123.2 65 81.5
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.6e-26 123.2 76 76.3
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 1.6e-26 123.2 92 65.2
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 2.1e-26 122.9 79 69.6
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 2.1e-26 122.9 88 65.9
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 2.1e-26 122.9 73 76.7
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.7e-26 122.5 73 74.0
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.5e-26 122.1 74 74.3
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.6e-26 121.7 74 71.6
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 6.0e-26 121.3 66 77.3
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 6.0e-26 121.3 78 66.7
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 7.9e-26 120.9 59 86.4
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 7.9e-26 120.9 64 81.2
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.0e-25 120.6 73 71.2
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 1.0e-25 120.6 64 79.7
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 1.3e-25 120.2 84 67.9
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 1.3e-25 120.2 92 63.0
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 1.8e-25 119.8 98 61.2
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 2.3e-25 119.4 73 71.2
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 2.3e-25 119.4 52 96.2
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 2.3e-25 119.4 80 67.5
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 3.0e-25 119.0 75 77.3
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 3.9e-25 118.6 67 76.1
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 5.1e-25 118.2 84 66.7
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 6.7e-25 117.9 85 67.1
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 6.7e-25 117.9 64 76.6
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 8.7e-25 117.5 75 73.3
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 1.1e-24 117.1 63 81.0
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.1e-24 117.1 73 72.6
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.1e-24 117.1 69 69.6
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 1.1e-24 117.1 72 72.2
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 1.9e-24 116.3 72 68.1
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 3.3e-24 115.5 60 81.7
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 3.3e-24 115.5 85 68.2
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.3e-24 115.5 85 68.2
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 3.3e-24 115.5 53 92.5
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 4.3e-24 115.2 62 80.6
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 4.3e-24 115.2 85 68.2
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 4.3e-24 115.2 62 77.4
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 7.4e-24 114.4 57 84.2
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 7.4e-24 114.4 80 65.0
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 9.6e-24 114.0 69 75.4
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 9.6e-24 114.0 60 85.0
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.3e-23 113.6 54 87.0
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 1.6e-23 113.2 69 66.7
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 1.6e-23 113.2 65 73.8
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 2.1e-23 112.8 88 58.0
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.8e-23 112.5 85 63.5
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 3.7e-23 112.1 69 75.4
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 3.7e-23 112.1 76 67.1
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 3.7e-23 112.1 55 83.6
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 3.7e-23 112.1 76 67.1
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 4.8e-23 111.7 50 92.0
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 4.8e-23 111.7 50 92.0
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 4.8e-23 111.7 50 92.0
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 4.8e-23 111.7 71 71.8
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 6.2e-23 111.3 88 60.2
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 8.2e-23 110.9 51 90.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 8.2e-23 110.9 51 90.2
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 8.2e-23 110.9 51 90.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 8.2e-23 110.9 51 90.2
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 8.2e-23 110.9 51 90.2
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 8.2e-23 110.9 51 90.2
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 1.4e-22 110.2 58 77.6
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 1.8e-22 109.8 53 84.9
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 1.8e-22 109.8 52 86.5
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 2.4e-22 109.4 50 90.0
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 2.4e-22 109.4 70 67.1
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 4.0e-22 108.6 82 59.8
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 4.0e-22 108.6 71 70.4
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 5.3e-22 108.2 50 88.0
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 1.2e-21 107.1 68 70.6
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 2.0e-21 106.3 50 86.0
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 5.8e-21 104.8 47 87.2
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 1.0e-20 104.0 52 80.8
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 1.3e-20 103.6 84 58.3
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.7e-20 103.2 63 66.7
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 3.8e-20 102.1 89 51.7
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 3.8e-20 102.1 70 61.4
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 1.9e-19 99.8 70 64.3
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 1.9e-19 99.8 89 56.2
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 3.2e-19 99.0 80 52.5
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 7.1e-19 97.8 56 73.2
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 2.1e-18 96.3 51 76.5
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.1e-18 96.3 61 72.1
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 1.3e-17 93.6 46 80.4
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 2.3e-17 92.8 77 57.1
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 2.2e-15 86.3 49 67.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 2.4e-14 82.8 51 64.7


User provided reference genes

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