Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 1.0e-143 513.5 269 100.0
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.6e-125 451.8 252 88.5
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 5.3e-92 341.7 317 57.4
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 3.2e-89 332.4 254 68.5
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 5.7e-78 295.0 298 52.3
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 7.4e-78 294.7 254 60.2
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 9.6e-78 294.3 253 60.1
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.6e-77 293.5 254 60.2
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.1e-77 293.1 254 59.1
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 2.8e-77 292.7 269 55.4
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.1e-76 290.8 259 58.3
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 5.3e-76 288.5 253 60.9
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 1.5e-75 287.0 305 53.8
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 5.9e-75 285.0 276 56.2
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.7e-74 283.5 269 55.0
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 2.2e-74 283.1 277 57.4
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 1.9e-73 280.0 271 55.0
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 4.2e-73 278.9 269 54.6
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 5.5e-73 278.5 252 58.3
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 5.5e-73 278.5 271 55.7
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 1.6e-72 276.9 268 54.5
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 6.1e-72 275.0 275 53.5
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.0e-71 274.2 289 55.7
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 2.3e-71 273.1 256 57.8
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 6.7e-71 271.6 285 53.3
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 1.1e-70 270.8 268 54.5
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 1.5e-70 270.4 259 56.0
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.9e-70 270.0 276 54.3
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 5.7e-70 268.5 254 56.3
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 9.7e-70 267.7 254 54.3
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.3e-69 267.3 254 55.5
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.6e-69 266.9 271 56.1
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.6e-69 266.9 271 54.6
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 3.7e-69 265.8 270 55.6
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 4.8e-69 265.4 268 52.2
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 8.2e-69 264.6 255 54.9
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 1.1e-68 264.2 268 52.6
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 4.1e-68 262.3 256 56.2
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 4.1e-68 262.3 252 54.4
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 2.0e-67 260.0 269 52.8
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 2.6e-67 259.6 272 52.2
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 4.5e-67 258.8 254 59.8
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.3e-66 257.3 159 76.1
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.7e-66 256.9 273 52.0
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.8e-66 255.8 301 48.2
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 6.5e-66 255.0 284 54.6
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.1e-65 254.2 253 56.5
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.4e-65 253.8 258 59.3
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 9.4e-65 251.1 267 54.3
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 2.7e-64 249.6 296 47.6
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 2.7e-64 249.6 283 48.1
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 2.7e-64 249.6 259 52.5
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 4.6e-64 248.8 308 47.4
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 1.0e-63 247.7 255 53.3
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.8e-63 246.9 261 56.3
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 2.3e-63 246.5 254 51.6
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 3.9e-63 245.7 290 49.3
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 5.1e-63 245.4 142 78.9
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.5e-62 243.8 298 45.3
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 2.0e-62 243.4 146 75.3
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 5.7e-62 241.9 254 50.4
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.3e-61 240.7 295 46.1
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 4.8e-61 238.8 146 76.0
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 7.7e-59 231.5 295 44.7
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 1.1e-57 227.6 163 67.5
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 4.2e-57 225.7 159 66.0
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 5.5e-57 225.3 160 65.0
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 7.2e-57 224.9 160 65.0
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.6e-56 223.8 251 49.8
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 2.1e-56 223.4 159 66.0
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 3.6e-56 222.6 259 45.9
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.6e-56 222.6 158 66.5
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.6e-56 222.6 158 66.5
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 6.1e-56 221.9 160 64.4
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 2.3e-55 219.9 157 65.0
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 3.0e-55 219.5 155 66.5
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 3.9e-55 219.2 158 66.5
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 5.2e-55 218.8 302 42.4
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 5.2e-55 218.8 254 49.2
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 8.8e-55 218.0 159 66.0
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 8.8e-55 218.0 163 65.0
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 8.8e-55 218.0 159 66.0
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 5.7e-54 215.3 263 46.8
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 3.7e-53 212.6 158 63.9
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 6.3e-53 211.8 256 44.9
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 5.3e-52 208.8 284 41.5
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.9e-50 203.0 294 43.2
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 4.7e-48 195.7 271 39.9
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 8.0e-48 194.9 310 41.3
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 1.3e-45 187.6 248 44.4
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 2.4e-44 183.3 162 56.8
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 4.5e-43 179.1 152 55.3
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.7e-40 169.9 225 45.3
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 6.1e-40 168.7 255 42.7
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 2.3e-34 150.2 146 47.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 1.2e-32 144.4 214 38.3
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 2.1e-32 143.7 119 57.1
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 1.8e-31 140.6 112 63.4
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 1.3e-29 134.4 114 56.1
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.7e-26 124.0 228 38.6
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 2.5e-25 120.2 59 88.1
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 2.1e-24 117.1 71 70.4
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.6e-24 116.3 59 83.1
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 2.9e-21 106.7 151 36.4
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.6e-16 90.9 159 39.0
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.4e-12 77.8 38 81.6
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 9.2e-12 75.1 54 59.3
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 6.6e-10 68.9 36 86.1
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.5e-09 67.8 98 39.8
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.4e-07 61.2 55 52.7


User provided reference genes

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