Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 3.1e-78 295.4 192 100.0
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 1.9e-64 249.6 181 94.5
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 6.7e-57 224.6 181 82.3
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 2.7e-50 202.6 178 79.8
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 2.7e-50 202.6 178 79.8
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 2.6e-45 186.0 127 78.7
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 3.4e-45 185.7 127 76.4
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 3.8e-44 182.2 158 72.2
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 6.5e-44 181.4 185 67.0
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 1.1e-43 180.6 127 74.8
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 1.9e-43 179.9 120 79.2
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 3.2e-43 179.1 118 78.0
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 7.2e-43 177.9 157 63.7
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 4.7e-42 175.3 119 76.5
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 8.0e-42 174.5 120 75.0
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 1.0e-41 174.1 153 66.0
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 1.4e-41 173.7 126 74.6
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 1.8e-41 173.3 132 68.2
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 3.9e-41 172.2 127 70.1
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 8.8e-41 171.0 111 80.2
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 1.1e-40 170.6 127 71.7
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.5e-40 170.2 127 69.3
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 1.5e-40 170.2 127 69.3
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 2.0e-40 169.9 151 69.5
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 2.0e-40 169.9 151 72.2
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 2.6e-40 169.5 127 71.7
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 5.7e-40 168.3 104 81.7
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 5.7e-40 168.3 127 69.3
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 9.7e-40 167.5 127 67.7
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 1.3e-39 167.2 127 71.7
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 1.3e-39 167.2 118 75.4
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 1.7e-39 166.8 127 72.4
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.7e-39 166.8 107 77.6
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 2.2e-39 166.4 157 73.2
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 2.2e-39 166.4 128 68.0
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 2.8e-39 166.0 130 67.7
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 3.7e-39 165.6 125 72.0
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 6.3e-39 164.9 115 75.7
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 8.2e-39 164.5 117 74.4
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 8.2e-39 164.5 127 69.3
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 8.2e-39 164.5 130 67.7
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 1.1e-38 164.1 130 67.7
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 1.1e-38 164.1 120 75.0
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 1.1e-38 164.1 127 70.9
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.1e-38 164.1 128 66.4
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 1.4e-38 163.7 128 73.4
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.8e-38 163.3 130 66.9
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 2.4e-38 162.9 127 70.9
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 3.1e-38 162.5 128 70.3
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 3.1e-38 162.5 130 66.9
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 5.3e-38 161.8 118 74.6
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 5.3e-38 161.8 127 67.7
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 7.0e-38 161.4 121 71.1
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 7.0e-38 161.4 117 69.2
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 1.6e-37 160.2 129 67.4
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.6e-37 160.2 129 67.4
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 2.0e-37 159.8 189 55.6
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 2.6e-37 159.5 116 71.6
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 3.5e-37 159.1 121 67.8
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 4.5e-37 158.7 127 63.8
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 5.9e-37 158.3 124 66.9
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 1.7e-36 156.8 190 62.1
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 2.2e-36 156.4 90 88.9
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 2.9e-36 156.0 115 73.0
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 2.9e-36 156.0 119 71.4
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 1.9e-35 153.3 101 75.2
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 1.9e-35 153.3 101 75.2
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 4.2e-35 152.1 183 53.6
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 7.2e-35 151.4 99 78.8
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 9.4e-35 151.0 101 74.3
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 9.4e-35 151.0 120 68.3
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 9.4e-35 151.0 159 56.0
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 1.2e-34 150.6 121 67.8
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 2.1e-34 149.8 118 68.6
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 3.6e-34 149.1 127 61.4
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 1.0e-33 147.5 127 63.0
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 1.0e-33 147.5 101 73.3
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 1.0e-33 147.5 128 65.6
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 1.0e-33 147.5 123 69.1
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 2.3e-33 146.4 101 72.3
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 3.0e-33 146.0 103 74.8
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 4.0e-33 145.6 110 70.9
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 5.2e-33 145.2 111 71.2
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 6.7e-33 144.8 88 84.1
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 6.7e-33 144.8 101 72.3
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 8.8e-33 144.4 124 61.3
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 8.8e-33 144.4 124 61.3
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 1.5e-32 143.7 107 66.4
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 1.5e-32 143.7 107 66.4
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 3.7e-31 139.0 95 81.1
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 3.7e-31 139.0 95 81.1
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 3.7e-31 139.0 93 77.4
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 2.4e-30 136.3 118 61.0
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 5.3e-30 135.2 126 61.9
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 9.1e-30 134.4 127 63.0
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 2.7e-29 132.9 91 73.6
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 2.5e-27 126.3 111 63.1
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 9.8e-24 114.4 69 84.1
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.1e-22 110.9 102 65.7
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 2.4e-22 109.8 65 90.8
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 7.7e-21 104.8 83 67.5
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 2.1e-18 96.7 128 46.1
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 2.8e-18 96.3 118 49.2
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 6.8e-17 91.7 104 47.1
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 2.2e-15 86.7 55 78.2
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 4.9e-15 85.5 197 50.8
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 1.7e-12 77.0 47 80.9
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 5.6e-11 72.0 37 94.6
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 1.4e-09 67.4 89 53.9
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 4.0e-09 65.9 92 46.7
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 4.4e-08 62.4 58 55.2
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 4.9e-07 58.9 106 37.7


User provided reference genes

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