Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03269 Corylus avellana HOM05D003104 ORTHO05D003448 4.0e-66 254.6 126 100.0
Cfa010709 Carpinus fangiana HOM05D003104 ORTHO05D003448 6.8e-50 200.7 158 68.4
Medtr2g061720 Medicago truncatula HOM05D003104 ORTHO05D003448 3.0e-13 79.0 124 38.7
TPR.G16156 Trifolium pratense HOM05D003104 ORTHO05D003448 3.0e-13 79.0 124 41.9
GSVIVG01001356001 Vitis vinifera HOM05D003104 ORTHO05D003448 1.5e-12 76.6 117 38.5
Glyma.08G157900 Glycine max HOM05D003104 ORTHO05D003448 1.3e-11 73.6 124 41.1
Lalb_Chr20g0108211 Lupinus albus HOM05D003104 ORTHO05D003448 2.0e-09 66.2 125 36.8
Potri.006G192100 Populus trichocarpa HOM05D003104 ORTHO05D003448 2.0e-09 66.2 135 35.6
QL04p001561 Quercus lobata HOM05D003104 ORTHO05D003448 3.4e-09 65.5 127 39.4
Psat1g128960 Pisum sativum HOM05D003104 ORTHO05D003448 4.5e-09 65.1 119 37.0
VMungo1080G1532 Vigna mungo HOM05D003104 ORTHO05D003448 9.9e-09 63.9 124 35.5
TAR633G2208 Trochodendron aralioides HOM05D003104 ORTHO05D003448 2.2e-08 62.8 155 30.3
TAR623G0313 Trochodendron aralioides HOM05D003104 ORTHO05D003448 3.8e-08 62.0 155 31.6
Phvul.005G042100 Phaseolus vulgaris HOM05D003104 ORTHO05D003448 1.9e-07 59.7 124 33.1
Lj9P620T33 Lonicera japonica HOM05D003104 ORTHO05D003448 3.2e-07 58.9 117 32.5
Thecc.05G171100 Theobroma cacao HOM05D003104 ORTHO05D003448 3.2e-07 58.9 123 34.1
Ciclev10013474m.g Citrus clementina HOM05D003104 ORTHO05D003448 4.2e-07 58.5 118 33.1
CiPaw.09G030500 Carya illinoinensis HOM05D003104 ORTHO05D003448 7.1e-07 57.8 129 30.2
Aqoxy2G00080 Aquilegia oxysepala HOM05D003104 ORTHO05D003448 1.6e-06 56.6 122 32.0
Duzib093G0308 Durio zibethinus HOM05D003104 ORTHO05D003448 1.6e-06 56.6 127 34.6
Manes.09G035200 Manihot esculenta HOM05D003104 ORTHO05D003448 1.6e-06 56.6 119 37.0
Potri.016G046000 Populus trichocarpa HOM05D003104 ORTHO05D003448 1.6e-06 56.6 119 35.3
FAN05G4633 Fragaria x ananassa HOM05D006059 ORTHO05D003448 2.1e-06 56.2 125 34.4
Sabra06G0147200 Salix brachista HOM05D003104 ORTHO05D003448 2.1e-06 56.2 118 33.9
Duzib106G0856 Durio zibethinus HOM05D003104 ORTHO05D003448 2.7e-06 55.8 126 34.1
Glyma.15G268300 Glycine max HOM05D003104 ORTHO05D003448 2.7e-06 55.8 120 37.5
TAR636G0094 Trochodendron aralioides HOM05D003104 ORTHO05D003448 2.7e-06 55.8 155 27.7
RcHm_v2.0_Chr3g0479721 Rosa chinensis HOM05D003104 ORTHO05D003448 3.5e-06 55.5 130 31.5
Sabra16G0050100 Salix brachista HOM05D003104 ORTHO05D003448 4.6e-06 55.1 120 35.8
COL.COLO4_33986 Corchorus olitorius HOM05D003104 ORTHO05D003448 6.0e-06 54.7 132 34.8
Gohir.A04G055700 Gossypium hirsutum HOM05D003104 ORTHO05D003448 6.0e-06 54.7 122 34.4
MBI04_g33964_MAGBIO Magnolia biondii HOM05D003104 ORTHO05D003448 6.0e-06 54.7 118 31.4
FvH4_6g22390 Fragaria vesca HOM05D003104 ORTHO05D003448 7.9e-06 54.3 125 33.6
FAN14G0351 Fragaria x ananassa HOM05D003104 ORTHO05D003448 7.9e-06 54.3 125 33.6
FAN14G4340 Fragaria x ananassa HOM05D003104 ORTHO05D003448 7.9e-06 54.3 125 33.6


User provided reference genes

Program Settings