Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 9.2e-234 813.1 399 100.0
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 5.6e-215 750.7 379 97.6
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 1.1e-199 699.9 399 86.2
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 8.1e-190 667.2 400 82.2
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 8.1e-190 667.2 400 81.8
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 6.4e-187 657.5 407 80.1
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 2.4e-186 655.6 400 81.0
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 3.2e-186 655.2 400 79.8
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 3.2e-186 655.2 400 79.2
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 4.2e-186 654.8 379 85.0
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 5.4e-186 654.4 403 80.4
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 4.6e-185 651.4 401 79.6
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 2.3e-184 649.0 401 80.0
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 2.3e-184 649.0 400 79.2
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 3.0e-184 648.7 399 78.7
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 6.7e-184 647.5 400 79.8
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.5e-183 646.4 400 79.2
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 4.3e-183 644.8 423 76.1
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.3e-182 643.3 407 78.1
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 1.5e-180 636.3 379 81.3
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 1.5e-180 636.3 380 82.4
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 2.6e-180 635.6 403 77.4
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 2.6e-180 635.6 401 77.8
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 3.4e-180 635.2 382 80.6
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 5.8e-180 634.4 361 85.3
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 1.3e-179 633.3 406 78.8
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 4.9e-179 631.3 380 81.1
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 1.9e-178 629.4 380 81.3
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 1.9e-178 629.4 399 76.9
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 7.1e-178 627.5 379 80.7
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 9.3e-178 627.1 399 76.7
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 9.3e-178 627.1 399 76.2
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 9.3e-178 627.1 405 76.3
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 1.2e-177 626.7 407 76.4
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 3.5e-177 625.2 399 75.2
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 4.6e-177 624.8 399 75.4
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 6.0e-177 624.4 460 70.0
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 7.9e-177 624.0 400 77.0
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.3e-176 623.2 404 76.7
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 1.8e-176 622.9 404 76.5
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 3.0e-176 622.1 399 75.9
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 3.0e-176 622.1 348 86.2
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 3.0e-176 622.1 406 75.1
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 3.9e-176 621.7 400 77.5
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 6.7e-176 620.9 348 85.9
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.9e-175 619.4 399 76.2
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 1.9e-175 619.4 400 76.2
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 3.3e-175 618.6 355 83.9
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 5.7e-175 617.8 408 76.5
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 5.7e-175 617.8 382 79.8
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 3.7e-174 615.1 383 79.1
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 1.1e-173 613.6 380 78.7
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 1.8e-173 612.8 400 75.8
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 4.0e-173 611.7 348 83.9
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 5.3e-173 611.3 374 79.9
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 1.2e-172 610.1 399 75.7
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 2.6e-172 609.0 373 79.9
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 3.4e-172 608.6 400 75.0
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 5.8e-172 607.8 395 75.4
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 1.0e-171 607.1 399 75.4
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 2.2e-171 605.9 399 75.2
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 8.4e-171 604.0 380 78.9
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 2.5e-170 602.4 400 73.8
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 4.2e-170 601.7 355 80.6
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 7.1e-170 600.9 400 74.0
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 7.1e-170 600.9 327 88.4
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 9.3e-170 600.5 399 74.9
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 1.2e-169 600.1 403 73.9
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.6e-169 599.7 372 79.6
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 2.1e-169 599.4 400 74.8
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 6.1e-169 597.8 355 81.4
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 7.9e-169 597.4 401 71.8
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 7.9e-169 597.4 403 73.2
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 3.0e-168 595.5 398 72.9
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 5.1e-168 594.7 401 71.3
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 6.7e-168 594.3 355 81.1
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 8.7e-168 594.0 348 82.5
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.9e-167 592.8 345 82.9
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 2.5e-167 592.4 350 81.1
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 3.3e-167 592.0 399 72.2
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 7.4e-167 590.9 332 84.6
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 9.7e-167 590.5 392 75.3
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.6e-166 589.7 401 70.3
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 2.2e-166 589.3 402 72.4
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 4.8e-166 588.2 404 73.5
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 8.2e-166 587.4 360 79.2
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.1e-165 587.0 372 77.4
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.4e-165 586.6 373 75.9
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.8e-165 586.3 355 80.3
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 5.3e-165 584.7 357 77.0
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 1.3e-163 580.1 319 85.9
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.7e-163 579.7 401 71.1
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.4e-162 576.6 354 76.8
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 6.1e-161 571.2 351 76.6
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.5e-159 566.6 400 70.0
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 1.3e-155 553.5 376 73.7
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 3.8e-155 552.0 347 75.8
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 2.5e-154 549.3 376 73.1
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 8.2e-150 534.3 395 69.9
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.3e-147 526.9 399 67.9
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 1.5e-143 513.5 353 69.1
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 1.3e-142 510.4 346 69.1
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 2.2e-142 509.6 353 72.0
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.8e-141 506.5 332 71.4
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 5.3e-141 505.0 351 70.4
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 2.2e-139 499.6 379 68.1
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 1.2e-137 493.8 337 69.1
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 4.5e-132 475.3 399 62.4
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 4.5e-124 448.7 294 76.5
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 2.3e-120 436.4 329 60.8
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 2.2e-118 429.9 376 58.2
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 3.2e-117 426.0 287 74.2
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 2.0e-116 423.3 286 73.1
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 1.8e-112 410.2 285 71.6
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 8.3e-110 401.4 292 69.9
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 3.2e-109 399.4 328 57.6
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 5.2e-104 382.1 327 58.7
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 2.3e-96 356.7 369 50.4
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.9e-69 267.3 287 45.3
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 7.1e-69 265.4 218 65.1
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 3.1e-64 250.0 190 66.3
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 2.1e-60 237.3 178 65.2
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 1.8e-51 207.6 179 62.6
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.7e-49 199.9 131 75.6
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 7.7e-15 85.9 88 52.3
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 7.7e-15 85.9 88 52.3
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 1.7e-14 84.7 59 74.6
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 2.8e-09 67.4 35 82.9


User provided reference genes

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