Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 1.6e-73 279.3 133 100.0
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 5.1e-72 274.2 133 97.0
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 2.2e-67 258.8 133 89.5
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 1.0e-64 250.0 133 83.5
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 1.3e-64 249.6 130 86.2
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 1.3e-64 249.6 133 84.2
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 8.7e-64 246.9 130 86.2
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 8.7e-64 246.9 130 84.6
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 4.3e-63 244.6 133 82.7
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.3e-63 244.6 133 82.7
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.3e-63 244.6 133 82.7
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 5.7e-63 244.2 132 84.1
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 7.4e-63 243.8 133 82.0
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 9.7e-63 243.4 133 82.0
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 1.6e-62 242.7 133 82.0
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 2.8e-62 241.9 133 82.7
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 3.7e-62 241.5 130 82.3
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 3.7e-62 241.5 129 81.4
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 4.8e-62 241.1 129 82.9
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.1e-61 240.0 130 81.5
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 1.1e-61 240.0 133 80.5
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 1.1e-61 240.0 133 82.7
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.8e-61 239.2 130 80.8
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.8e-61 239.2 130 80.8
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 2.4e-61 238.8 130 82.3
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 3.1e-61 238.4 133 80.5
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 4.1e-61 238.0 130 80.0
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 4.1e-61 238.0 133 80.5
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 6.9e-61 237.3 133 80.5
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 9.0e-61 236.9 129 81.4
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 9.0e-61 236.9 130 80.0
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 1.2e-60 236.5 133 80.5
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 1.2e-60 236.5 174 67.8
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 2.6e-60 235.3 133 80.5
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 3.4e-60 235.0 133 78.9
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 3.4e-60 235.0 132 81.1
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 4.5e-60 234.6 133 78.9
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 5.9e-60 234.2 133 76.7
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 5.9e-60 234.2 130 79.2
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 1.7e-59 232.6 133 78.9
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 2.9e-59 231.9 130 79.2
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 2.9e-59 231.9 133 79.7
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 5.0e-59 231.1 130 77.7
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 5.0e-59 231.1 133 75.2
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 5.0e-59 231.1 129 77.5
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 6.5e-59 230.7 133 80.5
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 6.5e-59 230.7 129 79.1
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 8.5e-59 230.3 130 77.7
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 2.5e-58 228.8 133 75.9
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 3.2e-58 228.4 129 76.0
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 7.2e-58 227.3 133 75.2
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 1.2e-57 226.5 134 76.9
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 2.7e-57 225.3 130 77.7
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 3.6e-57 224.9 127 79.5
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 3.6e-57 224.9 129 75.2
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 6.1e-57 224.2 133 77.4
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 6.1e-57 224.2 130 75.4
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 7.9e-57 223.8 130 75.4
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 7.9e-57 223.8 133 73.7
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 1.0e-56 223.4 133 75.9
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 1.8e-56 222.6 130 76.2
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 6.7e-56 220.7 130 74.6
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 6.7e-56 220.7 133 72.9
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 8.8e-56 220.3 132 75.8
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 8.8e-56 220.3 132 75.8
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 1.1e-55 219.9 133 73.7
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 2.0e-55 219.2 130 74.6
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 2.5e-55 218.8 133 75.2
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 2.5e-55 218.8 132 78.0
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 4.3e-55 218.0 135 73.3
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 7.4e-55 217.2 129 75.2
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 7.4e-55 217.2 134 76.9
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 7.4e-55 217.2 133 70.7
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 1.3e-54 216.5 130 71.5
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 2.2e-54 215.7 133 72.2
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.8e-54 215.3 129 73.6
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 3.1e-53 211.8 133 72.2
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 3.4e-52 208.4 130 70.0
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 8.5e-51 203.8 130 69.2
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 1.9e-50 202.6 130 68.5
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.1e-49 199.1 129 69.8
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.6e-49 198.4 129 67.4
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 1.8e-48 196.1 131 65.6
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 3.0e-48 195.3 224 46.4
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 3.9e-48 194.9 126 70.6
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 2.0e-47 192.6 133 66.2
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 4.1e-45 184.9 131 61.8
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 4.1e-45 184.9 131 62.6
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 4.1e-45 184.9 131 61.8
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 4.1e-45 184.9 131 61.8
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 7.0e-45 184.1 131 61.1
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 7.0e-45 184.1 131 61.1
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 9.1e-45 183.7 130 65.4
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.6e-44 182.2 131 63.4
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 7.7e-44 180.6 133 60.2
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 1.0e-43 180.3 131 61.8
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 1.7e-43 179.5 131 61.1
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 5.0e-43 177.9 131 60.3
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 6.5e-43 177.6 133 59.4
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 3.2e-42 175.3 156 55.8
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 4.2e-42 174.9 129 61.2
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 1.6e-41 172.9 129 57.4
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 8.0e-41 170.6 131 61.1
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 7.4e-39 164.1 132 57.6
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.7e-38 162.9 135 54.8
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 3.1e-37 158.7 133 54.9
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 1.2e-36 156.8 85 83.5
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 2.0e-36 156.0 85 78.8
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 2.6e-36 155.6 130 54.6
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 2.2e-35 152.5 129 53.5
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 3.8e-35 151.8 129 53.5
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 1.9e-34 149.4 102 62.7
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 6.8e-32 141.0 129 49.6
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.8e-30 135.6 83 69.9
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 2.0e-28 129.4 76 76.3
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 6.5e-27 124.4 67 80.6
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 1.9e-26 122.9 130 50.8
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 1.4e-21 106.7 72 72.2
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.3e-19 100.1 124 42.7
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 6.1e-17 91.3 56 58.9
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 5.7e-15 84.7 48 79.2
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 2.2e-14 82.8 48 75.0
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 5.6e-10 68.2 53 56.6
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 1.2e-09 67.0 43 67.4
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.1e-09 66.2 47 61.7


User provided reference genes

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