Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03241 Corylus avellana HOM05D007237 ORTHO05D008854 3.9e-44 181.0 88 100.0
Duzib138G0953 Durio zibethinus HOM05D007237 ORTHO05D008854 2.1e-34 148.7 83 81.9
CiPaw.13G002300 Carya illinoinensis HOM05D007237 ORTHO05D008854 3.1e-33 144.8 83 81.9
MD02G1316200 Malus domestica HOM05D007237 ORTHO05D008854 3.4e-32 141.4 76 85.5
TWI09G0768 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 3.4e-32 141.4 83 79.5
Manes.07G003400 Manihot esculenta HOM05D007237 ORTHO05D008854 4.5e-32 141.0 83 75.9
CSS0046270 Camellia sinensis var. sinensis HOM05D007237 ORTHO05D008854 7.6e-32 140.2 83 77.1
Hma1.2p1_0845F.1_g227580 Hydrangea macrophylla HOM05D007237 ORTHO05D008854 9.9e-32 139.8 83 78.3
Thecc.01G414400 Theobroma cacao HOM05D007237 ORTHO05D008854 1.3e-31 139.4 83 75.9
TWI53G0305 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 1.3e-31 139.4 83 78.3
Gorai.008G105400 Gossypium raimondii HOM05D007237 ORTHO05D008854 1.1e-30 136.3 83 72.3
Prupe.2G008100 Prunus persica HOM05D007237 ORTHO05D008854 3.2e-30 134.8 78 78.2
Gohir.A12G094200 Gossypium hirsutum HOM05D007237 ORTHO05D008854 5.5e-30 134.0 83 71.1
Gohir.D08G166900 Gossypium hirsutum HOM05D007237 ORTHO05D008854 1.2e-29 132.9 78 75.6
Gorai.004G174300 Gossypium raimondii HOM05D007237 ORTHO05D008854 1.2e-29 132.9 78 75.6
MD07G1005700 Malus domestica HOM05D007237 ORTHO05D008854 1.6e-29 132.5 76 78.9
QL04p004894 Quercus lobata HOM05D007237 ORTHO05D008854 1.6e-29 132.5 83 74.7
Manes.10G147700 Manihot esculenta HOM05D007237 ORTHO05D008854 2.7e-29 131.7 85 72.9
Gohir.A08G146000 Gossypium hirsutum HOM05D007237 ORTHO05D008854 3.5e-29 131.3 78 74.4
Dinv43468 Davidia involucrata HOM05D007237 ORTHO05D008854 6.0e-29 130.6 75 77.3
arahy.Tifrunner.gnm1.ann1.CQ9Q2Z Arachis hypogaea HOM05D007237 ORTHO05D008854 2.3e-28 128.6 85 75.3
arahy.Tifrunner.gnm1.ann1.PP9VDR Arachis hypogaea HOM05D007237 ORTHO05D008854 3.0e-28 128.3 85 74.1
Ciclev10033078m.g Citrus clementina HOM05D007237 ORTHO05D008854 3.0e-28 128.3 83 68.7
Glyma.15G271600 Glycine max HOM05D007237 ORTHO05D008854 8.7e-28 126.7 83 72.3
EL10Ac2g04307 Beta vulgaris HOM05D007237 ORTHO05D008854 1.5e-27 125.9 79 73.4
Sabra16G0166400 Salix brachista HOM05D007237 ORTHO05D008854 1.5e-27 125.9 82 70.7
Prupe.2G008300 Prunus persica HOM05D007237 ORTHO05D008854 7.4e-27 123.6 75 74.7
Lalb_Chr03g0033911 Lupinus albus HOM05D007237 ORTHO05D008854 9.6e-27 123.2 85 69.4
vmacro13649 Vaccinium macrocarpon HOM05D000102 ORTHO05D000138 1.3e-26 122.9 64 85.9
Potri.001G271000 Populus trichocarpa HOM05D007237 ORTHO05D008854 1.6e-26 122.5 83 67.5
RcHm_v2.0_Chr1g0314811 Rosa chinensis HOM05D007237 ORTHO05D008854 1.6e-26 122.5 78 73.1
Glyma.08G152200 Glycine max HOM05D007237 ORTHO05D008854 2.8e-26 121.7 83 69.9
Lj3g0027771 Lotus japonicus HOM05D007237 ORTHO05D008854 3.7e-26 121.3 85 70.6
Atru.chr11.2633 Acer truncatum HOM05D007237 ORTHO05D008854 4.8e-26 120.9 77 70.1
Lalb_Chr20g0108101 Lupinus albus HOM05D007237 ORTHO05D008854 4.8e-26 120.9 83 68.7
Sc11g0009340 Simmondsia chinensis HOM05D007237 ORTHO05D008854 6.2e-26 120.6 83 67.5
Eucgr.J01258 Eucalyptus grandis HOM05D007237 ORTHO05D008854 8.2e-26 120.2 83 67.5
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 1.4e-25 119.4 64 82.8
Psat5g205480 Pisum sativum HOM05D007237 ORTHO05D008854 1.8e-25 119.0 77 70.1
MSTRG.28082 Avicennia marina HOM05D007237 ORTHO05D008854 2.4e-25 118.6 83 66.3
Ah.12g061430 Amaranthus hybridus HOM05D000016 ORTHO05D000433 4.0e-25 117.9 72 75.0
Medtr3g027590 Medicago truncatula HOM05D007237 ORTHO05D008854 4.0e-25 117.9 84 67.9
Actinidia31685 Actinidia chinensis HOM05D007237 ORTHO05D008854 5.3e-25 117.5 87 69.0
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 6.9e-25 117.1 63 79.4
ATR0605G218 Amborella trichopoda HOM05D007237 ORTHO05D008854 9.0e-25 116.7 72 70.8
TPR.G12234 Trifolium pratense HOM05D007237 ORTHO05D008854 9.0e-25 116.7 75 73.3
FvH4_7g00620 Fragaria vesca HOM05D007237 ORTHO05D008854 1.5e-24 115.9 78 66.7
MBI04_g14266_MAGBIO Magnolia biondii HOM05D007237 ORTHO05D008854 2.0e-24 115.5 83 66.3
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 4.5e-24 114.4 78 65.4
Sed0015658 Sechium edule HOM05D007237 ORTHO05D008854 5.8e-24 114.0 83 61.4
Aqoxy2G00108 Aquilegia oxysepala HOM05D007237 ORTHO05D008854 7.6e-24 113.6 84 65.5
HanXRQChr11g0330541 Helianthus annuus HOM05D007237 ORTHO05D008854 1.3e-23 112.8 74 73.0
Cc02_g27480 Coffea canephora HOM05D007237 ORTHO05D008854 2.2e-23 112.1 74 74.3
CANSAT21G0694 Cannabis sativa HOM05D007237 ORTHO05D008854 3.8e-23 111.3 55 89.1
Oeu036183.1 Olea europaea HOM05D000288 ORTHO05D008854 3.8e-23 111.3 80 67.5
Oeu036184.1 Olea europaea HOM05D007237 ORTHO05D008854 3.8e-23 111.3 80 67.5
SGA_v2.0_scaffold4G02250 Striga asiatica HOM05D000288 ORTHO05D000173 6.5e-23 110.5 78 61.5
arahy.Tifrunner.gnm1.ann1.1X74KR Arachis hypogaea HOM05D007237 ORTHO05D008854 8.4e-23 110.2 83 62.7
PGR044G2203 Punica granatum HOM05D007237 ORTHO05D008854 8.4e-23 110.2 78 61.5
ECA234G1833 Erigeron canadensis HOM05D007237 ORTHO05D008854 1.4e-22 109.4 72 70.8
Phvul.005G037300 Phaseolus vulgaris HOM05D007237 ORTHO05D008854 1.4e-22 109.4 77 67.5
HanXRQChr16g0519611 Helianthus annuus HOM05D007237 ORTHO05D008854 1.9e-22 109.0 73 71.2
HanXRQChr17g0563491 Helianthus annuus HOM05D007237 ORTHO05D008854 3.2e-22 108.2 78 65.4
SGA_v2.0_scaffold95G28787 Striga asiatica HOM05D000288 ORTHO05D000173 3.2e-22 108.2 79 62.0
Migut.O00928 Erythranthe guttata HOM05D007237 ORTHO05D008854 5.5e-22 107.5 85 62.4
SalBow4G0796 Salvia bowleyana HOM05D007237 ORTHO05D008854 5.5e-22 107.5 73 64.4
Lsat_1_v5_gn_4_46201 Lactuca sativa HOM05D007237 ORTHO05D008854 7.1e-22 107.1 73 69.9
CAN.G1393.1 Capsicum annuum HOM05D007237 ORTHO05D008854 9.3e-22 106.7 78 61.5
Peaxi162Scf00428g01024 Petunia axillaris HOM05D007237 ORTHO05D008854 2.1e-21 105.5 74 64.9
Ah.12g052640 Amaranthus hybridus HOM05D000491 ORTHO05D008854 4.6e-21 104.4 63 71.4
Solyc01g086830.4 Solanum lycopersicum HOM05D007237 ORTHO05D008854 4.6e-21 104.4 79 59.5
Sopen01g033840 Solanum pennellii HOM05D007237 ORTHO05D008854 1.3e-20 102.8 78 60.3
PSO017G6688 Papaver somniferum HOM05D007237 ORTHO05D008854 2.3e-20 102.1 73 65.8
THA.LOC104825138 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 5.1e-20 100.9 59 74.6
unitig_8.g3625 Utricularia gibba HOM05D007237 ORTHO05D008854 8.7e-20 100.1 74 62.2
Carub.0005s1847 Capsella rubella HOM05D007237 ORTHO05D008854 1.1e-19 99.8 61 73.8
Aa31LG10G7220 Aethionema arabicum HOM05D007237 ORTHO05D008854 1.9e-19 99.0 54 77.8
BcaC06g33382 Brassica carinata HOM05D007237 ORTHO05D008854 2.5e-19 98.6 54 77.8
A03p48720 Brassica napus HOM05D007237 ORTHO05D008854 2.5e-19 98.6 54 77.8
C07p46810 Brassica napus HOM05D007237 ORTHO05D008854 2.5e-19 98.6 54 77.8
BolC7t45198H Brassica oleracea HOM05D007237 ORTHO05D008854 2.5e-19 98.6 54 77.8
BraA03t13972Z Brassica rapa HOM05D007237 ORTHO05D008854 2.5e-19 98.6 54 77.8
Sp5g10150 Schrenkiella parvula HOM05D007237 ORTHO05D008854 2.5e-19 98.6 54 77.8
Thhalv10010991m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 3.3e-19 98.2 54 77.8
AL5G32700 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 4.3e-19 97.8 54 77.8
A09p45190 Brassica napus HOM05D007237 ORTHO05D008854 5.7e-19 97.4 54 75.9
BolC8t50357H Brassica oleracea HOM05D007237 ORTHO05D008854 5.7e-19 97.4 54 75.9
BraA09t39982Z Brassica rapa HOM05D007237 ORTHO05D008854 5.7e-19 97.4 54 75.9
CARHR161870 Cardamine hirsuta HOM05D007237 ORTHO05D008854 9.7e-19 96.7 54 77.8
BcaC02g09277 Brassica carinata HOM05D007237 ORTHO05D008854 1.3e-18 96.3 54 75.9
A04p07230 Brassica napus HOM05D007237 ORTHO05D008854 1.3e-18 96.3 54 75.9
C04p40790 Brassica napus HOM05D007237 ORTHO05D008854 1.3e-18 96.3 54 75.9
AT3G07450 Arabidopsis thaliana HOM05D007237 ORTHO05D008854 2.8e-18 95.1 73 57.5
BcaNung06095 Brassica carinata HOM05D007237 ORTHO05D008854 3.7e-18 94.7 53 75.5
C08p27400 Brassica napus HOM05D007237 ORTHO05D008854 3.7e-18 94.7 53 75.5
ClCG09G004370 Citrullus lanatus HOM05D007237 ORTHO05D008854 3.7e-18 94.7 83 51.8
AL3G18770 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 6.3e-18 94.0 73 56.2
BcaC05g29536 Brassica carinata HOM05D007237 ORTHO05D008854 1.1e-17 93.2 73 57.5
CARHR082100 Cardamine hirsuta HOM05D007237 ORTHO05D008854 1.4e-17 92.8 71 57.7
Carub.0003s0700 Capsella rubella HOM05D007237 ORTHO05D008854 1.8e-17 92.4 73 56.2
BraA05t22806Z Brassica rapa HOM05D007237 ORTHO05D008854 4.1e-17 91.3 73 56.2
A05p40750 Brassica napus HOM05D007237 ORTHO05D008854 5.3e-17 90.9 73 56.2
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 6.9e-17 90.5 87 54.0
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 6.9e-17 90.5 87 54.0
CsaV3_7G031300 Cucumis sativus L. HOM05D007237 ORTHO05D008854 1.2e-16 89.7 77 49.4
MELO3C023529.2 Cucumis melo HOM05D007237 ORTHO05D008854 1.5e-16 89.4 77 48.1
BraA03t12704Z Brassica rapa HOM05D007237 ORTHO05D008854 2.0e-16 89.0 79 49.4
C03p42880 Brassica napus HOM05D007237 ORTHO05D008854 2.6e-16 88.6 79 49.4
BolC3t16556H Brassica oleracea HOM05D007237 ORTHO05D008854 2.6e-16 88.6 79 49.4
Thhalv10022125m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 3.4e-16 88.2 54 70.4
BcaC01g04282 Brassica carinata HOM05D007237 ORTHO05D008854 4.5e-16 87.8 73 50.7
C05p59860 Brassica napus HOM05D007237 ORTHO05D008854 7.7e-16 87.0 73 53.4
BolC5t34640H Brassica oleracea HOM05D007237 ORTHO05D008854 7.7e-16 87.0 73 53.4
BcaB03g14701 Brassica carinata HOM05D007237 ORTHO05D008854 1.0e-15 86.7 73 52.1
A03p35260 Brassica napus HOM05D007237 ORTHO05D008854 1.3e-15 86.3 79 48.1
Sed0001876 Sechium edule HOM05D007237 ORTHO05D008854 1.7e-15 85.9 77 48.1
Rhsim07G0053900 Rhododendron simsii HOM05D000102 ORTHO05D000138 1.2e-13 79.7 39 84.6
THA.LOC104820127 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 2.1e-13 79.0 54 66.7
CDE10G0734 Ceratophyllum demersum HOM05D007237 ORTHO05D008854 1.4e-12 76.3 59 50.8
SHI04057 Sapria himalayana HOM05D007237 ORTHO05D008854 2.5e-11 72.0 81 45.7
arahy.Tifrunner.gnm1.ann1.202QP6 Arachis hypogaea HOM05D000001 ORTHO05D000003 7.2e-06 53.9 32 65.6


User provided reference genes

Program Settings