Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03223 Corylus avellana HOM05D000407 ORTHO05D163842 5.6e-98 360.9 180 100.0
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 2.7e-44 182.6 107 84.1
Haze_17461 Corylus avellana HOM05D000325 ORTHO05D002981 1.0e-14 84.3 110 50.9
Cfa018611 Carpinus fangiana HOM05D000434 ORTHO05D005487 5.0e-14 82.0 112 48.2
Haze_03224 Corylus avellana HOM05D000325 ORTHO05D002981 5.0e-14 82.0 60 83.3
CiPaw.15G005600 Carya illinoinensis HOM05D000325 ORTHO05D002981 6.6e-14 81.6 110 50.0
Prupe.1G308600 Prunus persica HOM05D000325 ORTHO05D002981 4.0e-11 72.4 111 42.3
Atru.chr11.1295 Acer truncatum HOM05D000325 ORTHO05D002981 6.8e-11 71.6 112 45.5
MD13G1043900 Malus domestica HOM05D000325 ORTHO05D002981 5.8e-10 68.6 101 42.6
CSS0047976 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 7.5e-10 68.2 107 45.8
CANSAT64G0172 Cannabis sativa HOM05D000325 ORTHO05D002981 1.7e-09 67.0 109 43.1
MD16G1044700 Malus domestica HOM05D000325 ORTHO05D002981 1.7e-09 67.0 101 41.6
QL01p043987 Quercus lobata HOM05D000325 ORTHO05D002981 1.1e-08 64.3 101 44.6
TWI31G0906 Tripterygium wilfordii HOM05D000325 ORTHO05D002981 1.1e-08 64.3 120 44.2
Manes.14G100200 Manihot esculenta HOM05D000325 ORTHO05D002981 4.1e-08 62.4 122 44.3
DCAR_023668 Daucus carota HOM05D000325 ORTHO05D002981 5.4e-08 62.0 124 37.9
arahy.Tifrunner.gnm1.ann1.Y584KM Arachis hypogaea HOM05D000325 ORTHO05D002981 3.5e-07 59.3 100 42.0
Actinidia14872 Actinidia chinensis HOM05D000325 ORTHO05D002981 4.6e-07 58.9 107 42.1
arahy.Tifrunner.gnm1.ann1.UY71W5 Arachis hypogaea HOM05D000325 ORTHO05D002981 1.0e-06 57.8 100 41.0
CSS0018164 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 1.0e-06 57.8 93 45.2
Cfa015638 Carpinus fangiana HOM05D000325 ORTHO05D002981 1.0e-06 57.8 58 62.1
Lalb_Chr04g0254791 Lupinus albus HOM05D000325 ORTHO05D002981 1.0e-06 57.8 96 42.7
Sc11g0003250 Simmondsia chinensis HOM05D000325 ORTHO05D002981 1.0e-06 57.8 112 42.0
TAR622G0952 Trochodendron aralioides HOM05D000325 ORTHO05D002981 1.0e-06 57.8 110 37.3
CSS0022755 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 1.3e-06 57.4 93 45.2
Cpa.g.sc1.189 Carica papaya HOM05D000325 ORTHO05D002981 2.3e-06 56.6 112 36.6
Lj6A761T53 Lonicera japonica HOM05D000325 ORTHO05D002981 2.3e-06 56.6 105 39.0
Potri.010G127000 Populus trichocarpa HOM05D000325 ORTHO05D002981 2.3e-06 56.6 120 40.8
arahy.Tifrunner.gnm1.ann1.22KD4N Arachis hypogaea HOM05D000325 ORTHO05D002981 3.0e-06 56.2 100 40.0
Duzib248G0121 Durio zibethinus HOM05D000325 ORTHO05D002981 3.0e-06 56.2 98 40.8
Medtr1g111210 Medicago truncatula HOM05D000325 ORTHO05D002981 3.0e-06 56.2 117 39.3
Duzib251G0337 Durio zibethinus HOM05D000325 ORTHO05D002981 3.9e-06 55.8 95 42.1
PGSC0003DMG400012974 Solanum tuberosum HOM05D000325 ORTHO05D002981 5.0e-06 55.5 91 38.5
TWI79G1668 Tripterygium wilfordii HOM05D000325 ORTHO05D002981 6.6e-06 55.1 55 56.4
Solyc05g009550.3 Solanum lycopersicum HOM05D000325 ORTHO05D002981 8.6e-06 54.7 91 38.5


User provided reference genes

Program Settings