Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 6.3e-116 421.0 248 100.0
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 2.1e-95 352.8 248 75.0
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 4.0e-94 348.6 246 77.2
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 5.7e-93 344.7 254 73.6
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 1.8e-91 339.7 249 79.5
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 5.4e-91 338.2 246 81.7
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 7.0e-91 337.8 246 69.9
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 7.0e-91 337.8 250 78.4
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 1.6e-90 336.7 185 87.0
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 3.5e-90 335.5 252 77.4
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 1.0e-89 334.0 255 76.5
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.9e-89 332.4 251 78.9
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 2.9e-89 332.4 249 73.5
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 2.9e-89 332.4 245 71.4
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 2.1e-87 326.2 183 84.2
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 2.8e-87 325.9 251 66.9
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 3.6e-87 325.5 179 86.6
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.4e-86 323.6 248 73.8
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 1.4e-86 323.6 247 72.1
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.8e-86 323.2 245 73.9
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 2.3e-86 322.8 248 77.4
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 3.1e-86 322.4 217 77.0
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 5.2e-86 321.6 245 69.4
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 6.8e-86 321.2 185 83.2
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 1.5e-85 320.1 249 69.9
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 2.0e-85 319.7 248 72.2
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 2.0e-85 319.7 247 76.9
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 2.0e-85 319.7 185 82.7
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 2.6e-85 319.3 248 77.0
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 4.4e-85 318.5 248 65.7
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 5.8e-85 318.2 180 85.0
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 9.8e-85 317.4 248 69.4
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 1.7e-84 316.6 185 81.6
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 2.2e-84 316.2 184 81.5
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 3.7e-84 315.5 179 83.8
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 3.7e-84 315.5 183 80.9
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 3.7e-84 315.5 183 80.9
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 4.9e-84 315.1 241 72.2
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 8.3e-84 314.3 181 81.8
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 1.1e-83 313.9 248 75.8
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 2.4e-83 312.8 180 82.8
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 5.4e-83 311.6 182 80.2
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 7.0e-83 311.2 244 67.2
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 9.2e-83 310.8 245 65.3
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 9.2e-83 310.8 176 83.5
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.6e-82 310.1 181 80.7
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 2.0e-82 309.7 247 72.1
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 2.0e-82 309.7 169 86.4
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 2.0e-82 309.7 224 68.3
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 2.0e-82 309.7 180 81.1
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 4.6e-82 308.5 184 79.3
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 4.6e-82 308.5 245 71.8
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 7.8e-82 307.8 181 79.6
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 1.3e-81 307.0 254 77.2
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 1.7e-81 306.6 176 81.2
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 1.7e-81 306.6 249 64.7
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 2.3e-81 306.2 226 67.7
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 2.3e-81 306.2 248 64.1
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 3.0e-81 305.8 178 80.9
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.9e-81 305.4 239 70.7
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 3.9e-81 305.4 170 82.9
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 5.0e-81 305.1 244 74.2
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 6.6e-81 304.7 173 80.9
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 8.6e-81 304.3 171 81.3
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 1.5e-80 303.5 247 64.0
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 1.5e-80 303.5 169 82.8
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 1.9e-80 303.1 185 77.3
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 3.3e-80 302.4 180 80.6
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 1.6e-79 300.1 185 78.4
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.6e-79 300.1 185 78.4
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 1.6e-79 300.1 232 69.4
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 2.1e-79 299.7 173 80.3
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 2.1e-79 299.7 173 80.3
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 3.6e-79 298.9 185 77.8
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 4.7e-79 298.5 180 78.3
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 6.2e-79 298.1 172 80.2
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 6.2e-79 298.1 172 80.2
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 1.1e-78 297.4 249 74.7
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.8e-78 296.6 181 77.3
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 4.0e-78 295.4 180 77.8
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 6.8e-78 294.7 262 69.8
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 6.8e-78 294.7 262 69.8
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 7.5e-77 291.2 245 67.8
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 4.1e-75 285.4 180 76.1
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 7.8e-74 281.2 247 64.4
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 8.6e-73 277.7 183 74.9
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 8.6e-73 277.7 246 66.3
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 8.1e-71 271.2 173 74.0
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.4e-70 270.4 179 71.5
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.8e-70 270.0 172 73.3
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.8e-70 270.0 172 73.3
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 2.6e-69 266.2 151 82.8
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 1.1e-67 260.8 152 77.0
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 1.4e-67 260.4 180 71.1
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 2.1e-66 256.5 182 69.2
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 2.7e-66 256.1 179 68.7
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 2.7e-66 256.1 170 73.5
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 4.6e-66 255.4 180 65.0
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 1.0e-65 254.2 208 67.8
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 5.1e-65 251.9 183 62.8
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 5.1e-65 251.9 183 62.8
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 5.2e-62 241.9 201 81.1
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 6.8e-62 241.5 169 68.6
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 2.0e-61 240.0 140 77.9
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 3.4e-61 239.2 179 60.9
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 9.9e-61 237.7 171 63.7
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 3.0e-57 226.1 132 81.8
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 1.2e-55 220.7 172 59.3
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 3.3e-48 196.1 120 76.7
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 9.6e-48 194.5 126 73.8
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 3.8e-44 182.6 124 73.4
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 3.7e-39 166.0 105 80.0
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 4.2e-27 125.9 181 39.8
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 2.5e-24 116.7 174 36.2
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 5.7e-24 115.5 71 76.1
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 3.6e-18 96.3 187 35.3
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 4.7e-10 69.3 55 56.4
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 1.7e-07 60.8 151 27.8
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 1.1e-06 58.2 152 26.3


User provided reference genes

Program Settings