Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 1.3e-216 756.1 381 100.0
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 2.5e-135 486.1 373 70.2
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 8.2e-131 471.1 373 70.2
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 1.4e-130 470.3 338 75.4
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 4.3e-124 448.7 323 73.1
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 7.4e-124 448.0 323 73.1
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 2.8e-123 446.0 329 71.4
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 7.7e-121 438.0 317 72.2
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 1.3e-120 437.2 324 71.0
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.7e-120 436.8 324 71.0
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 1.7e-120 436.8 317 71.9
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.4e-119 433.7 320 71.2
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 1.4e-119 433.7 320 71.9
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 3.2e-119 432.6 330 69.7
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 4.2e-119 432.2 330 70.0
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 5.5e-119 431.8 327 69.4
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 9.4e-119 431.0 320 70.3
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 1.6e-118 430.3 321 72.3
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 4.6e-118 428.7 348 67.0
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.1e-116 424.1 320 70.3
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 2.0e-116 423.3 320 69.7
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 2.5e-116 422.9 334 67.4
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 2.5e-116 422.9 320 70.6
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.5e-116 422.9 320 70.6
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.7e-116 421.8 322 70.2
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.7e-116 421.8 322 70.2
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 1.7e-115 420.2 324 66.7
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.2e-115 419.9 322 69.9
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 2.8e-115 419.5 328 67.1
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.4e-114 417.2 323 67.8
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 1.4e-114 417.2 329 67.5
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 2.4e-114 416.4 325 67.7
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 2.4e-114 416.4 322 69.3
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 9.1e-114 414.5 319 67.1
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 1.2e-113 414.1 321 67.6
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 2.6e-113 412.9 323 66.9
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 1.7e-112 410.2 331 66.2
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 2.2e-112 409.8 353 63.7
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 2.2e-112 409.8 319 68.0
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 2.2e-112 409.8 321 67.9
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 3.8e-112 409.1 316 69.3
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 5.5e-111 405.2 326 66.9
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 5.5e-111 405.2 320 67.8
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 1.2e-110 404.1 339 64.3
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 1.6e-110 403.7 329 64.4
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 6.1e-110 401.7 330 65.5
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 3.0e-109 399.4 329 63.5
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 3.9e-109 399.1 330 65.8
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 6.7e-109 398.3 323 65.9
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 1.1e-108 397.5 323 65.9
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 1.1e-108 397.5 323 65.9
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 1.5e-108 397.1 324 65.1
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 2.6e-108 396.4 343 63.3
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 5.7e-108 395.2 316 65.5
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 7.4e-108 394.8 317 66.9
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 7.4e-108 394.8 318 66.4
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 9.7e-108 394.4 339 64.9
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.3e-107 394.0 318 66.4
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.3e-107 394.0 326 64.4
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.3e-107 394.0 326 64.4
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 2.2e-107 393.3 345 63.8
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 2.8e-107 392.9 324 65.7
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 2.8e-107 392.9 323 64.7
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 3.7e-107 392.5 316 64.9
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 4.8e-107 392.1 325 63.7
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 8.2e-107 391.3 317 65.6
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 1.4e-106 390.6 326 63.8
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 2.4e-106 389.8 283 70.7
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 3.1e-106 389.4 343 64.4
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 2.6e-105 386.3 317 64.4
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 2.6e-105 386.3 312 64.7
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 2.6e-105 386.3 312 65.1
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 5.9e-105 385.2 312 66.0
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 2.5e-103 379.8 240 77.1
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 2.5e-103 379.8 302 65.2
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 3.2e-103 379.4 329 63.2
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 7.2e-103 378.3 317 62.8
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.4e-101 374.0 317 61.8
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 3.0e-101 372.9 317 61.5
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 3.9e-101 372.5 397 54.9
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 5.2e-101 372.1 240 75.8
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 2.0e-100 370.2 349 58.5
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.6e-100 369.8 250 75.2
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 5.3e-98 362.1 326 58.9
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 7.0e-98 361.7 319 61.1
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 1.6e-97 360.5 431 51.0
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 2.0e-97 360.1 323 59.8
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 7.7e-97 358.2 346 57.8
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 3.2e-95 352.8 376 55.1
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.3e-93 346.7 275 63.6
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.0e-93 346.3 253 68.8
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 8.8e-93 344.7 253 68.0
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 4.4e-92 342.4 253 64.4
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 1.3e-91 340.9 269 62.8
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 1.8e-90 337.0 350 56.3
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.7e-89 333.2 324 58.3
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 5.9e-89 332.0 317 57.7
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 1.1e-87 327.8 255 64.7
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 5.7e-84 315.5 247 61.5
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 6.6e-72 275.4 316 51.3
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.6e-70 270.8 237 56.1
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 1.4e-69 267.7 317 45.7
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.8e-69 267.3 234 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 2.0e-65 253.8 234 51.7
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 6.0e-57 225.7 169 66.9
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 1.4e-53 214.5 178 65.7
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 9.9e-52 208.4 289 40.8
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 8.3e-51 205.3 171 62.0
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 2.4e-50 203.8 175 67.4
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 9.2e-50 201.8 154 64.9
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 9.2e-50 201.8 154 64.9
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 9.2e-50 201.8 154 64.9
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 4.3e-47 193.0 177 58.2
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 2.8e-46 190.3 247 40.9
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 1.4e-45 188.0 228 42.5
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 5.8e-44 182.6 225 42.7
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 2.2e-43 180.6 289 42.2
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 3.3e-39 166.8 157 54.1
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 4.6e-33 146.4 168 52.4
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 2.3e-32 144.1 139 54.7
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 6.6e-32 142.5 97 68.0
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.9e-27 127.1 118 58.5
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 7.4e-23 112.5 64 78.1
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 1.5e-15 88.2 61 70.5
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 1.7e-11 74.7 104 46.2
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 1.2e-09 68.6 102 39.2
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 3.7e-06 57.0 43 62.8


User provided reference genes

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