Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 6.0e-229 797.7 596 100.0
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 9.9e-91 338.6 175 94.9
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 1.3e-77 295.0 176 82.4
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 1.3e-74 285.0 175 80.0
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 1.1e-70 271.9 176 74.4
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 9.0e-68 262.3 176 72.2
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 1.2e-67 261.9 175 73.7
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 2.6e-67 260.8 176 73.3
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 5.8e-67 259.6 176 74.4
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 1.7e-66 258.1 176 72.7
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 2.9e-66 257.3 176 72.7
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 2.5e-65 254.2 175 72.0
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 7.1e-65 252.7 176 72.2
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 7.9e-64 249.2 175 69.7
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 3.9e-63 246.9 175 69.1
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 5.1e-63 246.5 175 69.1
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 8.7e-63 245.7 175 70.3
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 1.5e-62 245.0 175 68.0
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 3.3e-62 243.8 175 66.9
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 7.4e-62 242.7 175 69.7
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 6.2e-61 239.6 175 66.9
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 1.8e-60 238.0 175 65.7
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 1.8e-60 238.0 175 67.4
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 3.1e-60 237.3 512 65.6
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 4.1e-60 236.9 175 67.4
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 1.5e-59 235.0 175 68.0
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 1.5e-59 235.0 175 68.6
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 2.0e-59 234.6 182 66.5
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 2.0e-59 234.6 175 66.3
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 2.6e-59 234.2 175 68.6
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 3.4e-59 233.8 175 66.9
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 4.5e-59 233.4 175 62.9
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.3e-58 231.9 175 68.6
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 1.3e-58 231.9 451 53.7
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 3.8e-58 230.3 175 65.1
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 8.4e-58 229.2 169 63.3
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 1.1e-57 228.8 177 65.5
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 1.1e-57 228.8 175 64.0
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.4e-57 228.4 178 65.2
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 1.4e-57 228.4 174 63.2
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 1.4e-57 228.4 175 64.6
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 1.9e-57 228.0 177 63.8
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 2.5e-57 227.6 476 42.2
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 4.2e-57 226.9 175 65.7
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 1.6e-56 224.9 175 64.6
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 2.1e-56 224.6 177 63.8
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 3.5e-56 223.8 175 62.9
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 1.0e-55 222.2 177 63.3
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.3e-55 221.9 175 62.9
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.3e-55 221.9 175 62.9
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 2.3e-55 221.1 175 60.6
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 1.5e-54 218.4 176 63.1
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 4.8e-53 213.4 175 60.0
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 1.2e-51 208.8 177 62.7
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 1.1e-49 202.2 175 59.4
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 1.0e-47 195.7 145 65.5
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 2.3e-47 194.5 145 66.9
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 8.8e-47 192.6 175 54.9
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 2.0e-46 191.4 145 62.8
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 9.7e-46 189.1 175 56.6
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 4.8e-45 186.8 457 65.0
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 8.2e-45 186.0 169 59.2
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 1.2e-43 182.2 175 52.0
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 5.9e-43 179.9 174 54.0
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 7.7e-43 179.5 175 54.9
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 1.0e-42 179.1 135 64.4
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 1.9e-41 174.9 175 54.3
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 7.2e-41 172.9 175 51.4
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 2.1e-40 171.4 108 75.0
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 1.0e-39 169.1 181 49.2
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 1.3e-37 162.2 169 50.3
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 1.3e-37 162.2 126 63.5
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 2.8e-37 161.0 108 71.3
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 8.2e-37 159.5 163 50.3
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 1.8e-36 158.3 181 47.0
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 2.9e-34 151.0 118 62.7
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 3.8e-34 150.6 107 67.3
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 2.7e-32 144.4 119 61.3
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 8.0e-32 142.9 148 52.0
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 3.0e-31 141.0 118 59.3
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 2.6e-30 137.9 116 58.6
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 4.5e-27 127.1 83 72.3
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 3.8e-26 124.0 116 56.9
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 4.2e-25 120.6 82 72.0
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 2.1e-24 118.2 82 64.6
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 8.3e-21 106.3 165 38.2
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 5.0e-18 97.1 68 66.2
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 8.0e-16 89.7 93 51.6
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 1.8e-15 88.6 93 50.5
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 1.1e-12 79.3 117 55.6
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 2.4e-12 78.2 60 61.7
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 2.7e-11 74.7 161 35.4
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 4.5e-11 73.9 60 60.0
Thhalv10003688m.g Eutrema salsugineum HOM05D007496 ORTHO05D009479 1.0e-10 72.8 155 25.2
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 1.3e-10 72.4 151 26.5
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 6.6e-10 70.1 54 61.1
AT2G02150 Arabidopsis thaliana HOM05D007496 ORTHO05D009479 5.6e-09 67.0 149 25.5
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 1.2e-08 65.9 148 24.3
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 2.1e-08 65.1 169 30.2
BraA06t27256Z Brassica rapa HOM05D007496 ORTHO05D009479 3.6e-08 64.3 138 25.4
Nitab4.5_0001130g0070 Nicotiana tabacum HOM05D000104 ORTHO05D009920 6.1e-08 63.5 87 37.9
AL5G11430 Arabidopsis lyrata HOM05D007496 ORTHO05D009479 8.0e-08 63.2 149 23.5
A06p43780 Brassica napus HOM05D007496 ORTHO05D009479 8.0e-08 63.2 138 25.4
Nitab4.5_0000103g0110 Nicotiana tabacum HOM05D000104 ORTHO05D009920 1.4e-07 62.4 87 37.9
Migut.I00272 Erythranthe guttata HOM05D007595 ORTHO05D009570 2.3e-07 61.6 93 36.6
Aqoxy6G01416 Aquilegia oxysepala HOM05D006858 ORTHO05D008767 4.0e-07 60.8 150 26.0
ClCG01G007050 Citrullus lanatus HOM05D007496 ORTHO05D009479 5.2e-07 60.5 147 32.0
Cc02_g04950 Coffea canephora HOM05D000104 ORTHO05D009920 5.2e-07 60.5 85 37.6
Sopen03g025210 Solanum pennellii HOM05D000104 ORTHO05D009920 5.2e-07 60.5 87 36.8
Solyc03g095200.1 Solanum lycopersicum HOM05D000104 ORTHO05D009920 6.8e-07 60.1 87 36.8
CsaV3_7G008750 Cucumis sativus L. HOM05D006858 ORTHO05D008767 8.9e-07 59.7 140 23.6
PGSC0003DMG400019642 Solanum tuberosum HOM05D007623 ORTHO05D009641 8.9e-07 59.7 165 28.5
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 8.9e-07 59.7 99 34.3
BcaC06g31248 Brassica carinata HOM05D007496 ORTHO05D009479 1.5e-06 58.9 132 24.2
MELO3C018437.2 Cucumis melo HOM05D006858 ORTHO05D008767 1.5e-06 58.9 142 23.2
PGSC0003DMG401025809 Solanum tuberosum HOM05D006858 ORTHO05D008767 1.5e-06 58.9 142 24.6
CAN.G322.86 Capsicum annuum HOM05D007083 ORTHO05D008801 2.6e-06 58.2 150 26.7
THA.LOC104817005 Tarenaya hassleriana HOM05D000104 ORTHO05D009920 2.6e-06 58.2 94 31.9
Oeu024268.1 Olea europaea HOM05D000104 ORTHO05D009920 3.4e-06 57.8 79 36.7
Solyc01g108410.3 Solanum lycopersicum HOM05D006858 ORTHO05D008767 3.4e-06 57.8 137 24.8
Sopen01g050630 Solanum pennellii HOM05D006858 ORTHO05D008767 3.4e-06 57.8 137 24.8
Sopen00g002400 Solanum pennellii HOM05D007623 ORTHO05D009641 4.4e-06 57.4 165 28.5
CAN.G322.19 Capsicum annuum HOM05D006858 ORTHO05D008767 5.7e-06 57.0 142 24.6
Nitab4.5_0005583g0010 Nicotiana tabacum HOM05D006858 ORTHO05D008767 5.7e-06 57.0 137 26.3
Potri.014G056400 Populus trichocarpa HOM05D000104 ORTHO05D009920 5.7e-06 57.0 169 26.0
SEGI_19561 Sequoiadendron giganteum HOM05D007496 ORTHO05D009431 5.7e-06 57.0 96 28.1
BcaC06g34078 Brassica carinata HOM05D007496 ORTHO05D009479 7.5e-06 56.6 147 24.5
BolC7t43809H Brassica oleracea HOM05D007496 ORTHO05D009479 7.5e-06 56.6 147 24.5
Gorai.003G135500 Gossypium raimondii HOM05D007212 ORTHO05D009094 7.5e-06 56.6 171 28.7
HanXRQChr17g0557061 Helianthus annuus HOM05D007639 ORTHO05D009509 7.5e-06 56.6 165 25.5
Oeu013687.1 Olea europaea HOM05D006858 ORTHO05D008767 9.8e-06 56.2 135 27.4


User provided reference genes

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