Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02885 Corylus avellana HOM05D000256 ORTHO05D000119 2.9e-40 167.9 76 100.0
Haze_02884 Corylus avellana HOM05D000256 ORTHO05D000119 2.0e-12 75.5 72 51.4
TPR.G23411 Trifolium pratense HOM05D000256 ORTHO05D000119 1.4e-10 69.3 69 47.8
Haze_13485 Corylus avellana HOM05D000256 ORTHO05D000119 1.2e-09 66.2 68 45.6
TPR.G23404 Trifolium pratense HOM05D000256 ORTHO05D000119 1.2e-09 66.2 69 46.4
Aqoxy3G03221 Aquilegia oxysepala HOM05D053432 ORTHO05D000119 1.6e-09 65.9 67 47.8
ClCG06G007560 Citrullus lanatus HOM05D000256 ORTHO05D000119 3.5e-09 64.7 67 49.3
CsaV3_2G012100 Cucumis sativus L. HOM05D000256 ORTHO05D000119 3.5e-09 64.7 67 47.8
Sed0024573 Sechium edule HOM05D000256 ORTHO05D000119 4.6e-09 64.3 67 47.8
Cfa014872 Carpinus fangiana HOM05D000256 ORTHO05D000119 7.8e-09 63.5 70 41.4
TPR.G23409 Trifolium pratense HOM05D000256 ORTHO05D000119 7.8e-09 63.5 69 44.9
RcHm_v2.0_Chr6g0312461 Rosa chinensis HOM05D000256 ORTHO05D000119 1.3e-08 62.8 63 44.4
RcHm_v2.0_Chr6g0312471 Rosa chinensis HOM05D000256 ORTHO05D000119 1.3e-08 62.8 63 44.4
Phvul.004G004200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.3e-08 62.0 70 47.1
RcHm_v2.0_Chr3g0496401 Rosa chinensis HOM05D000256 ORTHO05D000119 3.0e-08 61.6 68 42.6
TPR.G19335 Trifolium pratense HOM05D000256 ORTHO05D000119 3.0e-08 61.6 69 43.5
TPR.G14451 Trifolium pratense HOM05D000256 ORTHO05D000119 3.9e-08 61.2 52 50.0
Eucgr.H01885 Eucalyptus grandis HOM05D000256 ORTHO05D000119 5.1e-08 60.8 68 44.1
Prupe.1G062500 Prunus persica HOM05D000256 ORTHO05D000119 6.6e-08 60.5 65 44.6
MELO3C029931.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.1e-07 59.7 67 47.8
Haze_04241 Corylus avellana HOM05D000256 ORTHO05D000119 1.5e-07 59.3 62 46.8
MELO3C027517.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.5e-07 59.3 67 47.8
MELO3C027521.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.5e-07 59.3 67 47.8
MELO3C030137.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.9e-07 58.9 67 47.8
Thhalv10022192m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.9e-07 58.9 68 45.6
TPR.G22372 Trifolium pratense HOM05D000256 ORTHO05D000119 1.9e-07 58.9 69 40.6
Atru.chr1.833 Acer truncatum HOM05D000256 ORTHO05D000119 2.5e-07 58.5 69 42.0
Prupe.1G057200 Prunus persica HOM05D000256 ORTHO05D000119 2.5e-07 58.5 67 41.8
MELO3C027025.2 Cucumis melo HOM05D000256 ORTHO05D000119 5.6e-07 57.4 67 46.3
Phvul.004G097900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 5.6e-07 57.4 68 44.1
Prupe.1G062800 Prunus persica HOM05D000256 ORTHO05D000119 5.6e-07 57.4 65 40.0
MELO3C027840.2 Cucumis melo HOM05D000256 ORTHO05D000119 7.3e-07 57.0 68 39.7
MELO3C027895.2 Cucumis melo HOM05D000256 ORTHO05D000119 7.3e-07 57.0 68 39.7
Prupe.1G062600 Prunus persica HOM05D000256 ORTHO05D000119 7.3e-07 57.0 65 41.5
Prupe.1G062700 Prunus persica HOM05D000256 ORTHO05D000119 7.3e-07 57.0 65 41.5
TPR.G22641 Trifolium pratense HOM05D000256 ORTHO05D000119 7.3e-07 57.0 68 36.8
CiPaw.14G113500 Carya illinoinensis HOM05D000256 ORTHO05D000119 9.6e-07 56.6 69 44.9
MELO3C023040.2 Cucumis melo HOM05D000256 ORTHO05D000119 9.6e-07 56.6 68 39.7
MELO3C031156.2 Cucumis melo HOM05D000256 ORTHO05D000119 9.6e-07 56.6 68 38.2
Lalb_Chr18g0044311 Lupinus albus HOM05D000256 ORTHO05D000119 9.6e-07 56.6 68 39.7
Ciclev10017715m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.2e-06 56.2 71 39.4
MD00G1101200 Malus domestica HOM05D000256 ORTHO05D000119 1.2e-06 56.2 64 45.3
Medtr1g057370 Medicago truncatula HOM05D000256 ORTHO05D000119 1.2e-06 56.2 70 40.0
Atru.chr4.1735 Acer truncatum HOM05D000256 ORTHO05D000119 1.6e-06 55.8 67 41.8
MD05G1010100 Malus domestica HOM05D000256 ORTHO05D000119 1.6e-06 55.8 69 37.7
MD07G1006200 Malus domestica HOM05D000256 ORTHO05D000119 1.6e-06 55.8 72 40.3
Lalb_Chr20g0114951 Lupinus albus HOM05D000256 ORTHO05D000119 2.1e-06 55.5 68 41.2
Lalb_Chr20g0114961 Lupinus albus HOM05D000256 ORTHO05D000119 2.1e-06 55.5 68 41.2
Phvul.007G112600 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 2.1e-06 55.5 64 45.3
Prupe.1G057700 Prunus persica HOM05D000256 ORTHO05D000119 2.8e-06 55.1 68 41.2
Prupe.1G058100 Prunus persica HOM05D000256 ORTHO05D000119 2.8e-06 55.1 67 38.8
Prupe.1G059200 Prunus persica HOM05D000256 ORTHO05D000119 2.8e-06 55.1 64 40.6
Haze_13486 Corylus avellana HOM05D000256 ORTHO05D000119 3.6e-06 54.7 62 46.8
Medtr7g055917 Medicago truncatula HOM05D000256 ORTHO05D000119 3.6e-06 54.7 70 40.0
Sc13g0002810 Simmondsia chinensis HOM05D000256 ORTHO05D000119 3.6e-06 54.7 69 39.1
TWI77G1024 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 3.6e-06 54.7 69 42.0
BcaC09g48649 Brassica carinata HOM05D000256 ORTHO05D000119 4.7e-06 54.3 60 43.3
C01p47280 Brassica napus HOM05D000256 ORTHO05D000119 4.7e-06 54.3 60 43.3
BolC1t04698H Brassica oleracea HOM05D000256 ORTHO05D000119 4.7e-06 54.3 60 43.3
Carub.0005s2244 Capsella rubella HOM05D005246 ORTHO05D000119 4.7e-06 54.3 69 39.1
AT3G16970 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 6.2e-06 53.9 61 45.9
Ciclev10006406m.g Citrus clementina HOM05D000256 ORTHO05D000119 6.2e-06 53.9 68 36.8
Ciclev10006673m.g Citrus clementina HOM05D000256 ORTHO05D000119 6.2e-06 53.9 68 36.8
Prupe.1G057300 Prunus persica HOM05D000256 ORTHO05D000119 6.2e-06 53.9 65 41.5
Sp3g15180 Schrenkiella parvula HOM05D000256 ORTHO05D000119 6.2e-06 53.9 68 41.2
Sed0016424 Sechium edule HOM05D000256 ORTHO05D000119 6.2e-06 53.9 81 39.5
GSVIVG01014874001 Vitis vinifera HOM05D000256 ORTHO05D000119 6.2e-06 53.9 68 39.7
GSVIVG01014884001 Vitis vinifera HOM05D000256 ORTHO05D000119 6.2e-06 53.9 68 41.2
A01p37340 Brassica napus HOM05D000256 ORTHO05D000119 8.1e-06 53.5 60 43.3
BraA01t03793Z Brassica rapa HOM05D000256 ORTHO05D000119 8.1e-06 53.5 60 43.3
FvH4_2g30460 Fragaria vesca HOM05D000256 ORTHO05D000119 8.1e-06 53.5 63 42.9
Phvul.003G125200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 8.1e-06 53.5 68 36.8
PGR042G2906 Punica granatum HOM05D000256 ORTHO05D000119 8.1e-06 53.5 68 38.2


User provided reference genes

Program Settings