Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 8.3e-185 650.2 321 100.0
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.1e-133 480.3 294 83.7
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 6.7e-118 427.9 283 76.0
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 7.4e-117 424.5 282 74.8
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.9e-113 412.5 273 74.7
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 6.5e-113 411.4 284 72.2
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.7e-111 406.0 285 72.3
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 7.9e-111 404.4 273 75.1
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.1e-110 401.7 273 74.0
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 8.7e-110 401.0 274 73.7
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 4.3e-109 398.7 277 71.8
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 7.4e-109 397.9 273 72.2
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 9.7e-109 397.5 285 70.9
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 9.7e-109 397.5 274 73.7
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.2e-108 396.4 283 71.0
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 2.2e-108 396.4 276 72.8
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 4.8e-108 395.2 277 71.8
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 5.3e-107 391.7 328 64.0
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 9.0e-107 391.0 284 69.4
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.2e-106 390.6 220 84.1
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 3.4e-106 389.0 284 69.0
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 4.5e-106 388.7 284 68.7
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 7.7e-106 387.9 284 69.0
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 7.7e-106 387.9 284 70.4
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 7.7e-106 387.9 290 69.0
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 1.3e-105 387.1 277 70.8
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 2.9e-105 386.0 290 69.0
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 3.8e-105 385.6 274 72.3
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.8e-105 385.6 284 69.4
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.8e-105 385.6 284 69.4
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 5.0e-105 385.2 283 70.3
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 8.5e-105 384.4 279 70.6
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 8.5e-105 384.4 273 71.8
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.5e-104 382.9 220 81.4
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 3.2e-104 382.5 284 68.7
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 3.2e-104 382.5 279 69.5
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.2e-104 382.1 326 62.9
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 4.2e-104 382.1 282 69.9
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 5.5e-104 381.7 327 62.7
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.2e-103 380.6 284 69.0
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 2.1e-103 379.8 282 68.8
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 4.6e-103 378.6 284 67.6
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.4e-102 377.1 295 65.1
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.8e-102 376.7 277 70.8
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 3.0e-102 375.9 287 67.2
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 6.7e-102 374.8 283 68.9
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 6.7e-102 374.8 287 67.6
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 6.7e-102 374.8 287 67.6
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 6.7e-102 374.8 283 68.2
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.1e-101 374.0 285 68.1
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-101 373.6 277 69.0
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.0e-101 373.2 277 69.0
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 2.0e-101 373.2 274 70.8
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 3.3e-101 372.5 271 70.1
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 4.3e-101 372.1 285 67.7
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 4.3e-101 372.1 277 68.6
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.7e-101 371.7 298 65.1
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 7.4e-101 371.3 282 67.4
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 9.7e-101 370.9 263 72.6
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.3e-100 370.5 293 65.5
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 1.3e-100 370.5 224 78.6
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 2.2e-100 369.8 282 67.0
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 2.8e-100 369.4 271 70.8
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 2.8e-100 369.4 272 68.0
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 3.7e-100 369.0 283 67.1
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 6.3e-100 368.2 284 66.9
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 8.2e-100 367.9 277 67.9
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.1e-99 367.5 277 67.9
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.4e-99 367.1 277 67.9
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 1.8e-99 366.7 284 66.5
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 3.1e-99 365.9 269 68.4
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 4.1e-99 365.5 277 67.9
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 1.2e-98 364.0 277 67.5
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 2.0e-98 363.2 282 66.3
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 5.9e-98 361.7 276 67.4
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.3e-97 360.5 276 67.8
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.2e-97 359.8 300 62.7
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 2.9e-97 359.4 277 67.1
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 2.9e-97 359.4 280 67.1
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 2.9e-97 359.4 280 67.1
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 6.5e-97 358.2 263 70.3
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.1e-96 357.5 276 67.0
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.2e-96 354.8 300 62.7
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.7e-95 352.8 276 65.9
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.6e-95 352.4 278 65.8
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.6e-95 352.4 278 65.8
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 3.6e-95 352.4 285 63.5
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 4.7e-95 352.1 282 66.3
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 6.1e-95 351.7 310 60.6
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.4e-94 350.5 271 67.2
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 5.1e-94 348.6 278 65.5
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 6.7e-94 348.2 278 66.2
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 6.7e-94 348.2 261 69.3
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.5e-93 347.1 277 65.7
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 5.7e-93 345.1 285 63.2
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.4e-91 340.5 276 64.5
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 9.1e-91 337.8 275 64.7
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.0e-89 334.3 209 78.0
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 7.2e-88 328.2 275 62.5
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 9.4e-88 327.8 265 64.9
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 6.7e-86 321.6 233 71.7
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.8e-84 316.2 273 62.3
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 2.9e-81 306.2 224 67.4
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 3.8e-81 305.8 190 77.4
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 5.5e-80 302.0 220 69.5
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 3.7e-76 289.3 282 58.2
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 2.4e-75 286.6 279 53.4
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 2.7e-74 283.1 220 65.0
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 6.5e-73 278.5 211 67.3
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 4.2e-72 275.8 177 74.6
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.1e-71 273.5 196 68.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 2.0e-69 266.9 272 53.3
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 4.5e-66 255.8 277 50.5
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 2.3e-65 253.4 234 55.6
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 8.6e-65 251.5 268 51.1
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 3.5e-58 229.6 224 50.9
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 3.0e-41 173.3 122 67.2
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.9e-40 170.6 120 70.0
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 6.2e-39 165.6 289 36.7
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.4e-35 153.7 97 76.3
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.7e-34 150.2 177 49.7
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 7.8e-34 148.7 147 59.2
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 4.3e-32 142.9 106 64.2
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.6e-29 133.7 199 37.2
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 4.2e-27 126.3 226 36.3
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 3.4e-21 106.7 82 62.2


User provided reference genes

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