Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02830 Corylus avellana HOM05D000007 ORTHO05D000039 6.1e-48 193.7 92 100.0
Haze_02828 Corylus avellana HOM05D000007 ORTHO05D000039 6.7e-39 163.7 87 88.5
Haze_02821 Corylus avellana HOM05D000007 ORTHO05D000039 5.9e-27 124.0 89 69.7
Haze_02829 Corylus avellana HOM05D000007 ORTHO05D000039 1.9e-25 119.0 62 88.7
CiPaw.14G019500 Carya illinoinensis HOM05D000007 ORTHO05D000039 9.1e-20 100.1 89 50.6
QL04p029093 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-17 93.2 69 65.2
Haze_27606 Corylus avellana HOM05D000007 ORTHO05D000039 1.6e-16 89.4 69 65.2
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 1.0e-15 86.7 74 55.4
QL04p029107 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-15 86.3 63 63.5
Haze_13258 Corylus avellana HOM05D000007 ORTHO05D000039 1.8e-15 85.9 67 56.7
QL04p029172 Quercus lobata HOM05D000007 ORTHO05D000039 1.8e-15 85.9 81 51.9
QL04p029136 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-15 84.7 76 52.6
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 5.2e-15 84.3 60 63.3
QL03p020720 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-14 82.4 61 62.3
QL03p020743 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-14 82.4 61 62.3
QL03p020817 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-14 82.4 61 62.3
QL03p021893 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-14 82.4 61 62.3
QL03p021906 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-14 82.4 61 62.3
QL05p044215 Quercus lobata HOM05D000007 ORTHO05D000039 9.8e-14 80.1 76 51.3
QL05p044233 Quercus lobata HOM05D000007 ORTHO05D000039 9.8e-14 80.1 76 51.3
QL04p029261 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-13 78.2 76 50.0
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.1e-12 74.7 75 48.0
Cfa000448 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.6e-11 72.8 75 46.7
Haze_03184 Corylus avellana HOM05D000007 ORTHO05D000039 2.0e-11 72.4 88 47.7
CSS0003262 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 4.5e-11 71.2 60 55.0
Cpa.g.sc51.32 Carica papaya HOM05D000007 ORTHO05D000039 5.9e-11 70.9 79 45.6
AUR62011562 Chenopodium quinoa HOM05D000007 ORTHO05D000039 5.9e-11 70.9 65 49.2
Haze_03009 Corylus avellana HOM05D000007 ORTHO05D000039 5.9e-11 70.9 65 52.3
Haze_03011 Corylus avellana HOM05D000007 ORTHO05D000039 5.9e-11 70.9 64 54.7
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.8e-11 70.5 63 50.8
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.8e-11 70.5 86 44.2
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.0e-10 70.1 86 40.7
Actinidia29351 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.3e-10 69.7 60 53.3
PGSC0003DMG400007566 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.7e-10 69.3 84 46.4
PGSC0003DMG400037648 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.7e-10 69.3 84 46.4
TWI63G0287 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.9e-10 68.6 65 50.8
QL04p029140 Quercus lobata HOM05D000007 ORTHO05D000039 5.0e-10 67.8 68 47.1
AUR62016381 Chenopodium quinoa HOM05D000007 ORTHO05D000039 8.6e-10 67.0 65 46.2
Solyc07g044920.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.1e-09 66.6 61 54.1
vmacro05999 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.5e-09 66.2 60 55.0
Cfa000454 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.9e-09 65.9 78 44.9
TWI59G0999 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.9e-09 65.9 89 40.4
CAN.G212.10 Capsicum annuum HOM05D000007 ORTHO05D000039 2.5e-09 65.5 83 42.2
Cpa.g.c27218.3 Carica papaya HOM05D000007 ORTHO05D000039 3.3e-09 65.1 78 42.3
Cpa.g.sc17.141 Carica papaya HOM05D000007 ORTHO05D000039 3.3e-09 65.1 78 42.3
Cfa000425 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.6e-09 64.3 64 50.0
TWI53G1032 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.6e-09 64.3 84 38.1
vmacro10317 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 5.6e-09 64.3 65 44.6
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 7.3e-09 63.9 63 54.0
Haze_03076 Corylus avellana HOM05D000007 ORTHO05D000039 7.3e-09 63.9 74 43.2
Hma1.2p1_0901F.1_g234670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 7.3e-09 63.9 91 38.5
Hma1.2p1_0901F.1_g234685 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 7.3e-09 63.9 91 38.5
Hma1.2p1_1150F.1_g261840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 7.3e-09 63.9 91 38.5
Gohir.A12G083765 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.5e-09 63.5 70 42.9
Gohir.D12G088200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.5e-09 63.5 70 42.9
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 9.5e-09 63.5 70 42.9
Manes.04G093401 Manihot esculenta HOM05D000007 ORTHO05D000039 9.5e-09 63.5 89 37.1
Cpa.g.sc442.3 Carica papaya HOM05D000007 ORTHO05D000039 1.2e-08 63.2 78 41.0
Manes.04G093500 Manihot esculenta HOM05D000007 ORTHO05D000039 1.2e-08 63.2 68 41.2
Thecc.04G089800 Theobroma cacao HOM05D000007 ORTHO05D000039 1.2e-08 63.2 70 45.7
TWI53G1885 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.2e-08 63.2 83 42.2
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 1.6e-08 62.8 86 38.4
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.1e-08 62.4 84 42.9
Cfa000500 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.1e-08 62.4 63 52.4
CiPaw.07G024300 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.1e-08 62.4 75 40.0
CiPaw.08G159400 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.1e-08 62.4 81 40.7
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 2.1e-08 62.4 75 41.3
QL05p044326 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-08 62.4 65 47.7
CiPaw.07G024100 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.8e-08 62.0 75 40.0
Dinv07009 Davidia involucrata HOM05D000007 ORTHO05D000039 2.8e-08 62.0 62 48.4
CiPaw.07G024400 Carya illinoinensis HOM05D000007 ORTHO05D000039 3.6e-08 61.6 75 40.0
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 3.6e-08 61.6 70 42.9
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.6e-08 61.6 80 41.2
CiPaw.07G024500 Carya illinoinensis HOM05D000007 ORTHO05D000039 4.7e-08 61.2 75 40.0
Haze_03075 Corylus avellana HOM05D000007 ORTHO05D000039 4.7e-08 61.2 62 46.8
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.7e-08 61.2 86 38.4
Cfa000501 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.1e-08 60.8 63 50.8
COL.COLO4_12256 Corchorus olitorius HOM05D000007 ORTHO05D000039 6.1e-08 60.8 70 42.9
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 6.1e-08 60.8 86 38.4
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.0e-08 60.5 86 37.2
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 8.0e-08 60.5 86 38.4
TWI14G1098 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 8.0e-08 60.5 61 47.5
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 8.0e-08 60.5 69 47.8
Actinidia10577 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.0e-07 60.1 65 44.6
Cfa000498 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.0e-07 60.1 63 50.8
Dinv19778 Davidia involucrata HOM05D000007 ORTHO05D000039 1.0e-07 60.1 61 41.0
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-07 60.1 64 42.2
Cfa006665 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.4e-07 59.7 83 37.3
CiPaw.08G159300 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.4e-07 59.7 83 39.8
Dinv07686 Davidia involucrata HOM05D000007 ORTHO05D000039 1.4e-07 59.7 62 45.2
TWI81G0699 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.4e-07 59.7 63 47.6
TWI59G1353 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.8e-07 59.3 83 38.6
CiPaw.07G024200 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.3e-07 58.9 75 38.7
TWI74G1656 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.3e-07 58.9 75 41.3
Dinv01035 Davidia involucrata HOM05D000007 ORTHO05D000039 3.0e-07 58.5 55 47.3
Nn1g00748 Nelumbo nucifera HOM05D000007 ORTHO05D000017 3.0e-07 58.5 88 37.5
MSTRG.14886 Avicennia marina HOM05D000007 ORTHO05D000039 4.0e-07 58.2 79 39.2
Cfa000495 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.0e-07 58.2 82 42.7
Nitab4.5_0000217g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.0e-07 58.2 76 40.8
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-07 58.2 65 38.5
TWI59G1185 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.0e-07 58.2 82 41.5
MSTRG.3214 Avicennia marina HOM05D000007 ORTHO05D000039 5.2e-07 57.8 64 40.6
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 5.2e-07 57.8 60 50.0
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 6.8e-07 57.4 67 44.8
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 6.8e-07 57.4 67 44.8
DCAR_007412 Daucus carota HOM05D000007 ORTHO05D000039 8.9e-07 57.0 51 51.0
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.2e-06 56.6 70 41.4
TAR626G0901 Trochodendron aralioides HOM05D000007 ORTHO05D000017 1.2e-06 56.6 68 38.2
Manes.02G207000 Manihot esculenta HOM05D000007 ORTHO05D000039 1.5e-06 56.2 61 41.0
Manes.04G076886 Manihot esculenta HOM05D000007 ORTHO05D000039 1.5e-06 56.2 61 44.3
TWI59G0519 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.5e-06 56.2 92 37.0
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 2.0e-06 55.8 76 39.5
Gohir.D04G045600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.0e-06 55.8 70 41.4
Rhsim12G0196500 Rhododendron simsii HOM05D000007 ORTHO05D000039 2.0e-06 55.8 73 35.6
FAN23G0231 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.6e-06 55.5 64 37.5
Manes.04G077948 Manihot esculenta HOM05D000007 ORTHO05D000039 2.6e-06 55.5 61 39.3
Manes.04G083258 Manihot esculenta HOM05D000007 ORTHO05D000039 2.6e-06 55.5 61 39.3
QL04p026044 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-06 55.5 62 41.9
RcHm_v2.0_Chr2g0095711 Rosa chinensis HOM05D000007 ORTHO05D000039 2.6e-06 55.5 64 35.9
Dinv06198 Davidia involucrata HOM05D000007 ORTHO05D000039 3.4e-06 55.1 63 39.7
Lj8C10T4 Lonicera japonica HOM05D000007 ORTHO05D000039 3.4e-06 55.1 70 35.7
MD17G1230300 Malus domestica HOM05D000007 ORTHO05D000039 3.4e-06 55.1 59 44.1
Manes.14G121600 Manihot esculenta HOM05D000007 ORTHO05D000039 3.4e-06 55.1 61 42.6
SalBow1G6928 Salvia bowleyana HOM05D000007 ORTHO05D000039 3.4e-06 55.1 71 38.0
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 4.4e-06 54.7 67 43.3
Manes.04G077417 Manihot esculenta HOM05D000007 ORTHO05D000039 4.4e-06 54.7 61 41.0
Manes.04G081134 Manihot esculenta HOM05D000007 ORTHO05D000039 4.4e-06 54.7 61 41.0
PGSC0003DMG400009446 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.4e-06 54.7 77 32.5
FAN23G2749 Fragaria x ananassa HOM05D012798 ORTHO05D000039 5.7e-06 54.3 64 37.5
Lj8P354T16 Lonicera japonica HOM05D000007 ORTHO05D000039 5.7e-06 54.3 70 35.7
Lj8P355T18 Lonicera japonica HOM05D000007 ORTHO05D000039 5.7e-06 54.3 70 35.7
Manes.04G078479 Manihot esculenta HOM05D000007 ORTHO05D000039 5.7e-06 54.3 61 37.7
Manes.04G082727 Manihot esculenta HOM05D000007 ORTHO05D000039 5.7e-06 54.3 61 37.7
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 7.5e-06 53.9 76 32.9
Ciclev10028647m.g Citrus clementina HOM05D000007 ORTHO05D000039 7.5e-06 53.9 68 38.2
QL04p018990 Quercus lobata HOM05D000007 ORTHO05D000039 7.5e-06 53.9 70 37.1
PGSC0003DMG400006511 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.5e-06 53.9 77 33.8
CsaV3_6G037500 Cucumis sativus L. HOM05D000007 ORTHO05D000039 9.8e-06 53.5 64 37.5
Lj8C355T6 Lonicera japonica HOM05D000007 ORTHO05D000039 9.8e-06 53.5 67 35.8
PSO017G1533 Papaver somniferum HOM05D000007 ORTHO05D000017 9.8e-06 53.5 73 35.6
Solyc10g008580.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 9.8e-06 53.5 74 35.1
SGA_v2.0_scaffold108G30901 Striga asiatica HOM05D005116 ORTHO05D005937 9.8e-06 53.5 69 34.8


User provided reference genes

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