Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02812 Corylus avellana HOM05D000009 ORTHO05D000008 4.0e-66 255.4 215 100.0
Haze_02824 Corylus avellana HOM05D000009 ORTHO05D000008 3.2e-23 112.8 91 67.0
Haze_03219 Corylus avellana HOM05D000009 ORTHO05D000008 3.5e-22 109.4 88 68.2
Haze_02825 Corylus avellana HOM05D000009 ORTHO05D000008 2.8e-19 99.8 80 67.5
Haze_02491 Corylus avellana HOM05D000009 ORTHO05D000008 6.4e-16 88.6 89 53.9
Haze_03114 Corylus avellana HOM05D000009 ORTHO05D000008 6.4e-16 88.6 86 55.8
CiPaw.16G071100 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.1e-15 87.8 91 58.2
CiPaw.05G200200 Carya illinoinensis HOM05D000009 ORTHO05D000008 3.0e-13 79.7 89 53.9
Haze_05625 Corylus avellana HOM05D000009 ORTHO05D000008 1.5e-12 77.4 60 70.0
Haze_02494 Corylus avellana HOM05D003002 ORTHO05D003583 4.3e-12 75.9 76 55.3
Haze_03118 Corylus avellana HOM05D000009 ORTHO05D000008 2.8e-11 73.2 82 54.9
Hma1.2p1_1187F.1_g265200 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.6e-11 72.8 83 51.8
CiPaw.16G094300 Carya illinoinensis HOM05D000009 ORTHO05D000008 4.8e-11 72.4 86 52.3
QL04p009856 Quercus lobata HOM05D000009 ORTHO05D000008 1.4e-10 70.9 98 43.9
RcHm_v2.0_Chr1g0319741 Rosa chinensis HOM05D000009 ORTHO05D000008 1.4e-10 70.9 90 52.2
RcHm_v2.0_Chr1g0373891 Rosa chinensis HOM05D000009 ORTHO05D000008 1.4e-10 70.9 88 50.0
QL04p009875 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-10 70.5 91 47.3
QL04p083795 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-10 70.5 91 50.5
Dinv03134 Davidia involucrata HOM05D000009 ORTHO05D000008 4.0e-10 69.3 69 50.7
Dinv20829 Davidia involucrata HOM05D000009 ORTHO05D000008 4.0e-10 69.3 83 54.2
Haze_18871 Corylus avellana HOM05D000009 ORTHO05D000008 1.2e-09 67.8 87 49.4
MD11G1030400 Malus domestica HOM05D000009 ORTHO05D000008 1.2e-09 67.8 86 48.8
Thecc.10G155900 Theobroma cacao HOM05D000009 ORTHO05D000008 1.2e-09 67.8 91 46.2
MD00G1168500 Malus domestica HOM05D000009 ORTHO05D000008 2.0e-09 67.0 89 44.9
MD11G1030100 Malus domestica HOM05D000009 ORTHO05D000008 2.0e-09 67.0 89 44.9
MD11G1031300 Malus domestica HOM05D000009 ORTHO05D000008 2.0e-09 67.0 88 46.6
QL02p094947 Quercus lobata HOM05D000009 ORTHO05D000008 2.6e-09 66.6 91 47.3
Prupe.2G028000 Prunus persica HOM05D000009 ORTHO05D000008 3.4e-09 66.2 83 51.8
Dinv39031 Davidia involucrata HOM05D000009 ORTHO05D000008 4.5e-09 65.9 89 48.3
Manes.07G010500 Manihot esculenta HOM05D000009 ORTHO05D000008 4.5e-09 65.9 87 48.3
RcHm_v2.0_Chr1g0321091 Rosa chinensis HOM05D000009 ORTHO05D000008 4.5e-09 65.9 90 52.2
Thecc.10G156900 Theobroma cacao HOM05D000009 ORTHO05D000008 4.5e-09 65.9 91 45.1
Haze_03188 Corylus avellana HOM05D000009 ORTHO05D000008 5.8e-09 65.5 84 45.2
Haze_03490 Corylus avellana HOM05D000113 ORTHO05D000008 5.8e-09 65.5 83 49.4
Ciclev10018594m.g Citrus clementina HOM05D000009 ORTHO05D000008 7.6e-09 65.1 95 46.3
MD11G1011700 Malus domestica HOM05D000009 ORTHO05D000008 7.6e-09 65.1 88 45.5
QL02p094858 Quercus lobata HOM05D000009 ORTHO05D000008 7.6e-09 65.1 91 47.3
QL04p083906 Quercus lobata HOM05D000009 ORTHO05D000008 7.6e-09 65.1 91 47.3
Haze_27225 Corylus avellana HOM05D000009 ORTHO05D000008 9.9e-09 64.7 83 44.6
MD11G1034400 Malus domestica HOM05D000009 ORTHO05D000008 9.9e-09 64.7 89 44.9
QL02p094880 Quercus lobata HOM05D000009 ORTHO05D000008 2.9e-08 63.2 91 47.3
Sabra01G0017200 Salix brachista HOM05D000009 ORTHO05D000008 2.9e-08 63.2 94 42.6
Dinv34685 Davidia involucrata HOM05D000009 ORTHO05D000008 3.8e-08 62.8 83 50.6
Haze_27222 Corylus avellana HOM05D000009 ORTHO05D000008 4.9e-08 62.4 84 44.0
RcHm_v2.0_Chr1g0374841 Rosa chinensis HOM05D000009 ORTHO05D000008 4.9e-08 62.4 89 48.3
Thecc.10G151100 Theobroma cacao HOM05D000009 ORTHO05D000008 4.9e-08 62.4 87 48.3
Ciclev10006796m.g Citrus clementina HOM05D000009 ORTHO05D000008 6.4e-08 62.0 87 47.1
Dinv20838 Davidia involucrata HOM05D000009 ORTHO05D000008 6.4e-08 62.0 83 50.6
Dinv34687 Davidia involucrata HOM05D000009 ORTHO05D000008 6.4e-08 62.0 83 50.6
FAN06G0348 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.4e-08 62.0 89 48.3
Peaxi162Scf00461g00009 Petunia axillaris HOM05D000009 ORTHO05D000008 6.4e-08 62.0 82 43.9
QL04p083665 Quercus lobata HOM05D000009 ORTHO05D000008 6.4e-08 62.0 91 45.1
Thecc.07G139900 Theobroma cacao HOM05D000009 ORTHO05D000008 6.4e-08 62.0 93 46.2
Atru.chr6.262 Acer truncatum HOM05D000009 ORTHO05D000008 8.4e-08 61.6 89 46.1
Gohir.A11G313500 Gossypium hirsutum HOM05D000009 ORTHO05D000008 8.4e-08 61.6 80 52.5
Haze_03119 Corylus avellana HOM05D000009 ORTHO05D000008 1.1e-07 61.2 72 50.0
Haze_07199 Corylus avellana HOM05D000009 ORTHO05D000008 1.1e-07 61.2 82 43.9
RcHm_v2.0_Chr2g0131121 Rosa chinensis HOM05D000009 ORTHO05D000008 1.1e-07 61.2 90 46.7
Atru.chr6.256 Acer truncatum HOM05D000009 ORTHO05D000008 1.4e-07 60.8 89 44.9
Atru.chr6.269 Acer truncatum HOM05D000009 ORTHO05D000008 1.4e-07 60.8 89 44.9
Gohir.A04G016450 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.4e-07 60.8 89 48.3
RcHm_v2.0_Chr1g0320441 Rosa chinensis HOM05D000009 ORTHO05D000008 1.4e-07 60.8 88 48.9
CiPaw.14G097500 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.9e-07 60.5 83 44.6
Dinv10499 Davidia involucrata HOM05D000009 ORTHO05D000008 1.9e-07 60.5 83 49.4
Atru.chr11.2454 Acer truncatum HOM05D000009 ORTHO05D000008 2.4e-07 60.1 86 45.3
CiPaw.14G097400 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.4e-07 60.1 83 44.6
Dinv03128 Davidia involucrata HOM05D000009 ORTHO05D000008 2.4e-07 60.1 69 46.4
FAN06G0255 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-07 60.1 88 46.6
PGSC0003DMG400005046 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.4e-07 60.1 82 41.5
Ciclev10023525m.g Citrus clementina HOM05D000009 ORTHO05D000008 3.2e-07 59.7 94 43.6
Haze_21910 Corylus avellana HOM05D000602 ORTHO05D002639 3.2e-07 59.7 62 56.5
Dinv20832 Davidia involucrata HOM05D000009 ORTHO05D000008 3.2e-07 59.7 83 48.2
Gohir.D05G370433 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.2e-07 59.7 87 48.3
Thecc.10G156600 Theobroma cacao HOM05D000009 ORTHO05D000008 3.2e-07 59.7 88 44.3
CiPaw.13G006100 Carya illinoinensis HOM05D000009 ORTHO05D000008 4.2e-07 59.3 84 44.0
Haze_11107 Corylus avellana HOM05D000009 ORTHO05D000008 4.2e-07 59.3 69 52.2
Hma1.2p1_1604F.1_g293260 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.2e-07 59.3 88 45.5
Haze_18749 Corylus avellana HOM05D000009 ORTHO05D000008 5.5e-07 58.9 65 53.8
Eucgr.G03265 Eucalyptus grandis HOM05D000009 ORTHO05D000008 5.5e-07 58.9 82 41.5
FAN03G2348 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.5e-07 58.9 89 47.2
Gohir.D05G371100 Gossypium hirsutum HOM05D000009 ORTHO05D000008 5.5e-07 58.9 77 50.6
Gorai.009G439600 Gossypium raimondii HOM05D000009 ORTHO05D000008 5.5e-07 58.9 77 50.6
FvH4_7g27330 Fragaria vesca HOM05D000009 ORTHO05D000008 7.1e-07 58.5 88 46.6
Gohir.D05G371528 Gossypium hirsutum HOM05D000009 ORTHO05D000008 7.1e-07 58.5 87 47.1
Gohir.D05G371700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 7.1e-07 58.5 77 50.6
RcHm_v2.0_Chr1g0320081 Rosa chinensis HOM05D000009 ORTHO05D000008 7.1e-07 58.5 84 50.0
Duzib114G0573 Durio zibethinus HOM05D000009 ORTHO05D000008 9.3e-07 58.2 84 46.4
FAN06G1227 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.3e-07 58.2 89 47.2
Gorai.007G361200 Gossypium raimondii HOM05D000009 ORTHO05D000008 9.3e-07 58.2 87 46.0
Duzib114G0972 Durio zibethinus HOM05D000009 ORTHO05D000008 1.2e-06 57.8 83 47.0
FvH4_7g25680 Fragaria vesca HOM05D000009 ORTHO05D000008 1.2e-06 57.8 89 46.1
Hma1.2p1_0227F.1_g095790 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.2e-06 57.8 86 45.3
Medtr0137s0010 Medicago truncatula HOM05D000009 ORTHO05D000008 1.2e-06 57.8 92 42.4
Medtr3g014040 Medicago truncatula HOM05D000009 ORTHO05D000008 1.2e-06 57.8 92 42.4
RcHm_v2.0_Chr1g0320271 Rosa chinensis HOM05D000009 ORTHO05D000008 1.2e-06 57.8 84 47.6
RcHm_v2.0_Chr7g0237021 Rosa chinensis HOM05D000009 ORTHO05D000008 1.2e-06 57.8 84 46.4
Haze_03051 Corylus avellana HOM05D000009 ORTHO05D000008 1.6e-06 57.4 89 40.4
Gohir.A04G040800 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.6e-06 57.4 87 46.0
Gohir.D05G336650 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.6e-06 57.4 87 46.0
Gorai.009G368700 Gossypium raimondii HOM05D000009 ORTHO05D000008 1.6e-06 57.4 87 46.0
Gorai.009G439900 Gossypium raimondii HOM05D000009 ORTHO05D000008 1.6e-06 57.4 87 47.1
GSVIVG01000665001 Vitis vinifera HOM05D001296 ORTHO05D000008 1.6e-06 57.4 90 45.6
Ciclev10024478m.g Citrus clementina HOM05D000009 ORTHO05D000008 2.1e-06 57.0 81 44.4
Gorai.007G357500 Gossypium raimondii HOM05D000009 ORTHO05D000008 2.1e-06 57.0 89 46.1
Manes.10G133665 Manihot esculenta HOM05D000009 ORTHO05D000008 2.1e-06 57.0 93 39.8
Manes.10G133710 Manihot esculenta HOM05D000009 ORTHO05D000008 2.1e-06 57.0 93 39.8
QL04p093769 Quercus lobata HOM05D000009 ORTHO05D000008 2.1e-06 57.0 84 42.9
Thecc.07G138400 Theobroma cacao HOM05D000009 ORTHO05D000008 2.1e-06 57.0 84 45.2
FvH4_7g00850 Fragaria vesca HOM05D000009 ORTHO05D000008 2.7e-06 56.6 87 44.8
RcHm_v2.0_Chr1g0320971 Rosa chinensis HOM05D000009 ORTHO05D000008 2.7e-06 56.6 90 46.7
Duzib114G0334 Durio zibethinus HOM05D000009 ORTHO05D000008 3.5e-06 56.2 73 49.3
Duzib114G0584 Durio zibethinus HOM05D000009 ORTHO05D000008 3.5e-06 56.2 73 49.3
Duzib114G0614 Durio zibethinus HOM05D000009 ORTHO05D000008 3.5e-06 56.2 73 49.3
FAN03G1718 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.5e-06 56.2 89 46.1
Gohir.A04G016250 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.5e-06 56.2 80 47.5
Gohir.D05G342401 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.5e-06 56.2 87 46.0
Gorai.009G360600 Gossypium raimondii HOM05D000009 ORTHO05D000008 3.5e-06 56.2 87 44.8
Manes.10G128103 Manihot esculenta HOM05D000009 ORTHO05D000008 3.5e-06 56.2 93 39.8
Prupe.8G117900 Prunus persica HOM05D000009 ORTHO05D000008 3.5e-06 56.2 89 42.7
QL04p012365 Quercus lobata HOM05D000009 ORTHO05D000008 3.5e-06 56.2 87 43.7
Duzib138G1463 Durio zibethinus HOM05D000009 ORTHO05D000008 4.6e-06 55.8 81 42.0
Gohir.D11G330225 Gossypium hirsutum HOM05D000009 ORTHO05D000008 4.6e-06 55.8 80 50.0
Hma1.2p1_0573F.1_g181330 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.6e-06 55.8 89 43.8
Lj3g0004557 Lotus japonicus HOM05D000009 ORTHO05D000008 4.6e-06 55.8 85 44.7
MD11G1078100 Malus domestica HOM05D000009 ORTHO05D000008 4.6e-06 55.8 87 43.7
Ciclev10018556m.g Citrus clementina HOM05D000009 ORTHO05D000008 6.0e-06 55.5 81 45.7
FAN10G0536 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.0e-06 55.5 90 44.4
Thecc.10G156200 Theobroma cacao HOM05D000009 ORTHO05D000008 6.0e-06 55.5 86 46.5
FAN06G2578 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.9e-06 55.1 83 39.8
FAN10G0003 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.9e-06 55.1 89 42.7
FAN10G0261 Fragaria x ananassa HOM05D000009 ORTHO05D007267 7.9e-06 55.1 89 42.7
Gohir.D11G303700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 7.9e-06 55.1 80 48.8
Gorai.007G331000 Gossypium raimondii HOM05D000009 ORTHO05D000008 7.9e-06 55.1 80 48.8
Hma1.2p1_0573F.1_g181310 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.9e-06 55.1 89 43.8
Hma1.2p1_1761F.1_g301330 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.9e-06 55.1 89 44.9
Prupe.2G025700 Prunus persica HOM05D000009 ORTHO05D000008 7.9e-06 55.1 82 46.3
QL04p016714 Quercus lobata HOM05D000009 ORTHO05D000008 7.9e-06 55.1 84 41.7


User provided reference genes

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