Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02705 Corylus avellana HOM05D005075 ORTHO05D007097 3.1e-167 591.7 287 100.0
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 6.2e-115 417.9 233 89.3
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 2.0e-113 412.9 233 88.8
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 1.4e-103 380.2 233 81.1
CiPaw.05G114700 Carya illinoinensis HOM05D005075 ORTHO05D007097 2.1e-102 376.3 233 80.7
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 3.1e-90 335.9 233 71.7
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 1.5e-89 333.6 234 72.6
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 7.6e-89 331.3 233 70.8
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 1.1e-87 327.4 233 69.1
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 1.1e-87 327.4 233 71.2
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 1.9e-87 326.6 233 68.7
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 3.2e-87 325.9 233 68.7
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 4.2e-87 325.5 233 68.7
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 7.1e-87 324.7 233 69.5
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 9.3e-87 324.3 233 68.2
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 9.3e-87 324.3 233 69.1
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 1.3e-85 320.5 233 68.7
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 1.3e-85 320.5 233 68.7
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 1.8e-85 320.1 233 66.5
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 5.1e-85 318.5 233 67.4
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 5.1e-85 318.5 233 69.5
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 1.1e-84 317.4 233 67.8
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 2.8e-83 312.8 233 64.8
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 3.7e-83 312.4 233 66.5
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 8.1e-83 311.2 233 66.1
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 1.4e-82 310.5 233 64.8
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 1.8e-82 310.1 233 66.5
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 4.0e-82 308.9 233 63.9
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 5.3e-82 308.5 233 65.2
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 1.2e-81 307.4 233 64.8
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 1.5e-81 307.0 233 63.9
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 1.5e-81 307.0 235 66.0
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 2.6e-81 306.2 233 65.2
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 3.4e-81 305.8 233 64.8
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 5.8e-81 305.1 233 65.2
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 7.6e-81 304.7 233 65.7
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 7.6e-81 304.7 233 64.4
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 7.6e-81 304.7 233 63.9
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 7.6e-81 304.7 236 63.1
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 7.6e-81 304.7 233 65.7
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 9.9e-81 304.3 234 62.8
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 9.9e-81 304.3 233 66.1
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 1.3e-80 303.9 233 63.1
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 1.3e-80 303.9 233 65.2
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.7e-80 303.5 233 63.9
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 1.7e-80 303.5 234 63.2
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 6.4e-80 301.6 234 62.4
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 6.4e-80 301.6 233 63.5
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 1.1e-79 300.8 233 62.7
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 1.1e-79 300.8 233 63.9
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 1.1e-79 300.8 233 63.9
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 1.1e-79 300.8 235 63.8
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.4e-79 300.4 233 63.1
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 1.4e-79 300.4 233 62.7
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 1.4e-79 300.4 233 62.7
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 1.4e-79 300.4 233 62.7
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 1.4e-79 300.4 233 64.4
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 1.9e-79 300.1 233 63.9
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 2.5e-79 299.7 233 63.9
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 4.2e-79 298.9 233 63.9
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 4.2e-79 298.9 233 63.1
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 5.5e-79 298.5 234 65.0
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 5.5e-79 298.5 233 63.1
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 7.1e-79 298.1 233 63.5
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 7.1e-79 298.1 233 63.5
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 2.1e-78 296.6 233 64.8
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 2.7e-78 296.2 233 62.7
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 2.7e-78 296.2 233 62.7
Sopen05g002750 Solanum pennellii HOM05D005075 ORTHO05D007097 3.5e-78 295.8 233 63.9
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 4.6e-78 295.4 233 63.5
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 7.9e-78 294.7 233 61.8
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 7.9e-78 294.7 233 65.2
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 1.0e-77 294.3 233 60.9
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 3.9e-77 292.4 233 60.9
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 8.7e-77 291.2 235 61.7
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 1.5e-76 290.4 233 61.4
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 1.9e-76 290.0 234 62.4
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 2.5e-76 289.7 233 62.7
PSO063G5600 Papaver somniferum HOM05D005075 ORTHO05D007097 3.3e-76 289.3 233 64.8
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 5.6e-76 288.5 234 62.0
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 9.6e-76 287.7 233 61.4
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 1.3e-75 287.3 233 60.1
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 1.3e-75 287.3 233 61.4
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 2.8e-75 286.2 233 63.5
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 3.7e-75 285.8 233 59.2
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 1.1e-74 284.3 233 63.1
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 1.8e-74 283.5 234 61.1
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 4.0e-74 282.3 251 55.8
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 4.0e-74 282.3 251 55.8
PGSC0003DMG400021087 Solanum tuberosum HOM05D005075 ORTHO05D007097 2.9e-72 276.2 233 58.8
unitig_747.g21130 Utricularia gibba HOM05D005075 ORTHO05D007097 1.4e-71 273.9 240 57.1
SHI17941 Sapria himalayana HOM05D005075 ORTHO05D007097 1.6e-70 270.4 264 53.0
Ah.03g133860 Amaranthus hybridus HOM05D005075 ORTHO05D007097 3.9e-69 265.8 233 57.9
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 2.5e-68 263.1 233 54.5
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 2.5e-68 263.1 233 55.4
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 7.4e-68 261.5 233 56.7
Gohir.D02G152200 Gossypium hirsutum HOM05D005075 ORTHO05D007097 1.3e-67 260.8 185 69.2
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 2.2e-67 260.0 195 63.1
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 1.1e-63 247.7 233 57.1
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 1.0e-61 241.1 235 50.6
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 5.9e-57 225.3 171 68.4
HPP92_001244 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.9e-55 220.3 206 53.9
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 5.2e-45 185.7 233 44.6
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 2.6e-44 183.3 234 40.2
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 1.3e-43 181.0 131 68.7
Os01g0901700 Oryza sativa ssp. japonica HOM05D005075 ORTHO05D007097 1.3e-40 171.0 160 51.2
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 5.0e-40 169.1 219 41.6
Pp3c26_6380 Physcomitrium patens HOM05D005075 ORTHO05D007097 7.2e-39 165.2 186 44.1
Actinidia08085 Actinidia chinensis HOM05D005075 ORTHO05D007097 2.1e-38 163.7 132 59.8
CBR_g21048 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-32 143.3 157 44.6
Atru.chr11.2265 Acer truncatum HOM05D005075 ORTHO05D007097 2.5e-31 140.2 101 69.3
MBI18_g03939_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.0e-28 130.6 131 55.0
MBI05_g16127_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 1.7e-27 127.5 72 83.3
MCO06G130 Micromonas commoda HOM05D005075 ORTHO05D007097 4.8e-27 125.9 249 34.1
MBI18_g19470_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 4.1e-26 122.9 71 83.1
PRCOL_00001291 Prasinoderma coloniale HOM05D005075 ORTHO05D007097 5.4e-26 122.5 180 36.7
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 3.4e-20 103.2 63 74.6
Atru.chr11.2253 Acer truncatum HOM05D005075 ORTHO05D007097 7.5e-20 102.1 58 79.3
Cre14.g630895 Chlamydomonas reinhardtii HOM05D005075 ORTHO05D007097 4.9e-19 99.4 214 31.3
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis HOM05D005075 ORTHO05D007097 8.3e-19 98.6 101 46.5
MBI07_g43659_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 2.1e-14 84.0 86 51.2
Actinidia30670 Actinidia chinensis HOM05D005075 ORTHO05D007097 9.8e-12 75.1 72 51.4
Atru.chr12.1465 Acer truncatum HOM05D005075 ORTHO05D007097 7.8e-09 65.5 35 82.9


User provided reference genes

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