Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02631 Corylus avellana HOM05D007333 ORTHO05D008874 9.7e-89 330.1 164 100.0
Cfa011213 Carpinus fangiana HOM05D018442 ORTHO05D020347 9.8e-49 197.2 116 87.9
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 6.6e-37 157.9 129 67.4
QL04p040607 Quercus lobata HOM05D007333 ORTHO05D008874 5.8e-33 144.8 106 72.6
QL08p037183 Quercus lobata HOM05D018442 ORTHO05D020347 1.5e-28 130.2 94 74.5
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 8.9e-26 120.9 102 59.8
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 2.4e-15 86.3 126 43.7
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 7.1e-15 84.7 129 41.9
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 2.7e-14 82.8 126 46.0
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 1.5e-12 77.0 127 40.9
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 4.3e-12 75.5 102 44.1
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 1.1e-10 70.9 102 41.2
COL.COLO4_34173 Corchorus olitorius HOM05D018442 ORTHO05D020347 1.8e-10 70.1 106 43.4
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 4.0e-10 68.9 112 41.1
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 4.0e-10 68.9 97 37.1
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 2.0e-09 66.6 106 42.5
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 4.4e-09 65.5 138 37.7
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 7.6e-09 64.7 123 39.0
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 3.8e-08 62.4 102 38.2
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 3.8e-08 62.4 102 38.2
Thecc.10G097400 Theobroma cacao HOM05D018442 ORTHO05D020347 3.8e-08 62.4 123 38.2
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.1e-07 60.8 139 34.5
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 1.4e-07 60.5 101 37.6
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 3.2e-07 59.3 139 34.5
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 3.2e-07 59.3 108 46.3
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 3.2e-07 59.3 132 34.1
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 4.2e-07 58.9 102 36.3
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 4.2e-07 58.9 99 42.4
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 7.1e-07 58.2 132 36.4
Ciclev10029520m.g Citrus clementina HOM05D007333 ORTHO05D008874 9.3e-07 57.8 107 37.4
FvH4_7g06450 Fragaria vesca HOM05D007333 ORTHO05D008874 9.3e-07 57.8 106 34.9
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 9.3e-07 57.8 132 33.3
Ciclev10010649m.g Citrus clementina HOM05D007333 ORTHO05D008874 1.2e-06 57.4 107 37.4
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.2e-06 57.4 132 33.3
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.2e-06 57.4 132 32.6
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 1.6e-06 57.0 133 32.3
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 2.1e-06 56.6 133 32.3
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 2.7e-06 56.2 102 36.3
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 2.7e-06 56.2 92 42.4


User provided reference genes

Program Settings