Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02546 Corylus avellana HOM05D017720 ORTHO05D014169 1.5e-86 322.8 156 100.0
Cfa013255 Carpinus fangiana HOM05D017720 ORTHO05D014169 1.2e-19 100.5 76 61.8
Cfa013256 Carpinus fangiana HOM05D017720 ORTHO05D014169 5.9e-19 98.2 76 60.5
Cfa013300 Carpinus fangiana HOM05D017720 ORTHO05D014169 2.5e-17 92.8 79 53.2
Haze_21674 Corylus avellana HOM05D017720 ORTHO05D014169 1.1e-14 84.0 81 53.1
Haze_21698 Corylus avellana HOM05D017720 ORTHO05D014169 1.8e-12 76.6 119 40.3
Cfa023553 Carpinus fangiana HOM05D016510 ORTHO05D014169 2.0e-11 73.2 82 46.3
TWI53G0929 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 5.5e-09 65.1 80 40.0
Sed0018635 Sechium edule HOM05D000005 ORTHO05D000012 2.1e-08 63.2 81 43.2
MELO3C030973.2 Cucumis melo HOM05D000005 ORTHO05D000012 1.4e-07 60.5 81 43.2
Medtr5g036240 Medicago truncatula HOM05D000005 ORTHO05D000012 3.0e-07 59.3 77 41.6
Medtr8g012180 Medicago truncatula HOM05D000005 ORTHO05D000012 6.7e-07 58.2 71 43.7
Psat7g247640 Pisum sativum HOM05D000005 ORTHO05D008900 6.7e-07 58.2 72 41.7
FvH4_5g32990 Fragaria vesca HOM05D000005 ORTHO05D000012 8.8e-07 57.8 65 44.6
QL93p2016_0075 Quercus lobata HOM05D000005 ORTHO05D000012 1.5e-06 57.0 80 42.5
Lj3g0003742 Lotus japonicus HOM05D000005 ORTHO05D000012 2.0e-06 56.6 71 46.5
Medtr6g015730 Medicago truncatula HOM05D000005 ORTHO05D000012 2.0e-06 56.6 68 42.6
Psat4g206400 Pisum sativum HOM05D000005 ORTHO05D008900 2.0e-06 56.6 71 40.8
Cfa014937 Carpinus fangiana HOM05D017720 ORTHO05D014169 2.6e-06 56.2 63 55.6
QL93p2016_0111 Quercus lobata HOM05D000005 ORTHO05D013009 2.6e-06 56.2 80 41.2
CsaV3_3G041210 Cucumis sativus L. HOM05D000005 ORTHO05D000012 4.4e-06 55.5 81 39.5
Lj3g0018399 Lotus japonicus HOM05D000005 ORTHO05D000012 4.4e-06 55.5 73 45.2
Lj3g0025574 Lotus japonicus HOM05D000005 ORTHO05D008900 4.4e-06 55.5 72 40.3
Psat7g247720 Pisum sativum HOM05D000005 ORTHO05D008900 4.4e-06 55.5 67 41.8
RcHm_v2.0_Chr7g0230971 Rosa chinensis HOM05D000005 ORTHO05D000012 4.4e-06 55.5 78 41.0
RcHm_v2.0_Chr7g0241291 Rosa chinensis HOM05D000005 ORTHO05D000012 4.4e-06 55.5 78 41.0
Medtr8g012080 Medicago truncatula HOM05D000005 ORTHO05D000012 5.7e-06 55.1 69 40.6
Lj1g0006454 Lotus japonicus HOM05D000005 ORTHO05D000012 7.5e-06 54.7 71 43.7
Medtr5g029940 Medicago truncatula HOM05D000005 ORTHO05D008900 7.5e-06 54.7 74 39.2
Medtr8g011850 Medicago truncatula HOM05D000005 ORTHO05D000012 7.5e-06 54.7 70 38.6
Medtr5g047530 Medicago truncatula HOM05D000005 ORTHO05D000012 9.7e-06 54.3 69 43.5
Psat4g206320 Pisum sativum HOM05D000005 ORTHO05D008900 9.7e-06 54.3 71 40.8
TPR.G29361 Trifolium pratense HOM05D000005 ORTHO05D000012 9.7e-06 54.3 71 43.7


User provided reference genes

Program Settings