Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 8.3e-91 337.0 172 100.0
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 4.4e-76 288.1 160 94.4
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 2.6e-68 262.3 137 94.2
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 3.3e-47 192.2 137 74.5
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 3.7e-46 188.7 177 59.3
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 1.8e-45 186.4 177 58.8
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 3.8e-43 178.7 167 58.1
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 3.2e-42 175.6 137 64.2
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 7.1e-42 174.5 134 67.9
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 9.3e-42 174.1 137 70.1
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 6.7e-40 167.9 161 59.0
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 8.7e-40 167.5 176 54.0
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 1.5e-39 166.8 137 62.0
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 2.5e-39 166.0 137 59.1
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 4.3e-39 165.2 137 59.9
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 5.6e-39 164.9 137 59.9
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 5.6e-39 164.9 137 59.9
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 2.1e-38 162.9 137 59.9
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 2.1e-38 162.9 134 63.4
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 2.8e-38 162.5 137 61.3
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 6.2e-38 161.4 137 59.9
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 1.4e-37 160.2 131 61.8
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 2.4e-37 159.5 129 61.2
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 4.0e-37 158.7 129 58.9
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 5.3e-37 158.3 137 58.4
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 9.0e-37 157.5 131 61.1
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 1.2e-36 157.1 146 56.8
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.5e-36 156.8 131 60.3
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 2.6e-36 156.0 157 54.1
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 2.6e-36 156.0 157 54.1
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 3.4e-36 155.6 131 61.1
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 2.2e-35 152.9 177 49.7
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 8.4e-35 151.0 146 55.5
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.1e-34 150.6 130 56.9
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 1.4e-34 150.2 130 56.9
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.4e-34 150.2 129 57.4
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 1.4e-34 150.2 129 57.4
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 1.4e-34 150.2 180 51.7
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 2.5e-34 149.4 131 58.8
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 9.3e-34 147.5 131 58.0
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 1.6e-33 146.7 131 58.8
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 1.6e-33 146.7 179 48.6
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 4.6e-33 145.2 130 56.2
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 6.0e-33 144.8 165 48.5
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.0e-32 144.1 178 48.3
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 1.0e-32 144.1 129 57.4
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 5.1e-32 141.7 137 54.0
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 6.7e-32 141.4 136 54.4
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 6.7e-32 141.4 177 49.2
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 1.1e-31 140.6 150 53.3
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 1.1e-31 140.6 137 55.5
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 1.1e-31 140.6 176 47.7
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 9.7e-31 137.5 131 56.5
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 9.7e-31 137.5 133 54.9
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 4.8e-30 135.2 188 47.9
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 6.3e-30 134.8 167 49.1
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 6.3e-30 134.8 132 52.3
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 2.4e-29 132.9 137 54.7
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 3.1e-29 132.5 130 53.1
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 3.1e-29 132.5 130 53.1
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 3.1e-29 132.5 137 51.8
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 3.1e-29 132.5 140 55.0
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 4.1e-29 132.1 144 52.1
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 4.1e-29 132.1 140 55.0
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.3e-29 131.7 158 47.5
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 6.9e-29 131.3 130 52.3
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 9.0e-29 131.0 131 52.7
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 9.0e-29 131.0 131 52.7
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 1.2e-28 130.6 137 48.2
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 2.0e-28 129.8 136 50.0
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 2.6e-28 129.4 177 47.5
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 3.4e-28 129.0 130 52.3
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 4.5e-28 128.6 137 48.9
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 4.5e-28 128.6 142 50.7
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 5.9e-28 128.3 139 53.2
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 1.0e-27 127.5 126 55.6
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 1.0e-27 127.5 137 49.6
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 1.3e-27 127.1 173 46.2
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 1.7e-27 126.7 137 48.9
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 2.2e-27 126.3 127 55.1
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 2.9e-27 125.9 178 44.9
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 5.0e-27 125.2 165 44.2
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 8.5e-27 124.4 181 45.9
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 1.9e-26 123.2 105 59.0
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 4.2e-26 122.1 179 44.1
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 5.5e-26 121.7 132 51.5
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 9.3e-26 120.9 130 48.5
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 1.2e-25 120.6 133 50.4
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 4.6e-25 118.6 165 44.2
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 1.0e-24 117.5 132 47.0
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 1.8e-24 116.7 131 47.3
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 1.8e-24 116.7 131 47.3
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 3.9e-24 115.5 131 46.6
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 5.1e-24 115.2 126 48.4
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 6.7e-24 114.8 160 41.9
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 6.7e-24 114.8 113 57.5
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 6.7e-24 114.8 160 43.1
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 1.1e-23 114.0 128 45.3
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 3.3e-23 112.5 175 43.4
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 5.7e-23 111.7 139 45.3
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 7.4e-23 111.3 160 43.1
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 2.2e-22 109.8 127 47.2
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 2.2e-22 109.8 127 44.9
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.8e-22 108.6 140 48.6
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 1.8e-21 106.7 131 45.0
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 6.9e-21 104.8 177 40.7
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 9.1e-21 104.4 129 44.2
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 9.1e-21 104.4 131 44.3
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 4.5e-20 102.1 131 40.5
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 7.7e-20 101.3 131 42.0
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.0e-19 100.9 129 48.8
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.0e-19 100.9 129 48.8
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 2.2e-19 99.8 155 38.1
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 2.2e-19 99.8 177 40.7
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 3.8e-19 99.0 132 42.4
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.2e-18 94.7 129 45.7
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.2e-18 94.7 129 45.7
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 9.4e-18 94.4 84 64.3
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 6.1e-17 91.7 75 61.3
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 1.4e-16 90.5 155 39.4
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 1.1e-15 87.4 96 50.0
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 2.4e-13 79.7 132 34.1
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 5.3e-13 78.6 98 39.8
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.2e-12 77.4 47 63.8
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.2e-12 77.4 132 35.6
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 2.0e-12 76.6 94 47.9
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.6e-12 76.3 97 45.4
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 3.2e-10 69.3 39 79.5
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 5.5e-10 68.6 66 40.9
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 9.4e-10 67.8 82 46.3
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 1.6e-09 67.0 39 79.5
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 8.0e-09 64.7 79 48.1
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 1.1e-07 60.8 111 34.2
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.5e-07 60.5 67 41.8
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 2.2e-06 56.6 39 66.7
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 2.2e-06 56.6 39 66.7
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 6.3e-06 55.1 139 27.3


User provided reference genes

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