Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 6.5e-82 307.4 159 100.0
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 1.2e-75 286.6 160 94.4
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 1.5e-62 243.0 128 94.5
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 4.6e-43 178.3 126 75.4
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 2.3e-39 166.0 168 57.1
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 2.3e-39 166.0 168 57.1
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 7.5e-38 161.0 148 59.5
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 1.3e-37 160.2 126 67.5
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 1.4e-36 156.8 149 63.1
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 2.4e-36 156.0 147 57.8
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 5.4e-36 154.8 165 54.5
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 6.0e-35 151.4 152 57.9
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 1.5e-33 146.7 126 57.1
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 2.5e-33 146.0 126 57.9
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 2.5e-33 146.0 126 57.9
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 5.6e-33 144.8 126 60.3
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 9.5e-33 144.1 126 57.9
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 9.5e-33 144.1 126 60.3
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 2.1e-32 142.9 126 58.7
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 6.2e-32 141.4 126 59.5
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 3.1e-31 139.0 152 52.6
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 3.1e-31 139.0 120 60.0
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 3.1e-31 139.0 126 56.3
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 1.2e-30 137.1 118 55.9
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 1.5e-30 136.7 120 60.0
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 2.0e-30 136.3 118 57.6
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 2.6e-30 136.0 161 49.1
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 4.4e-30 135.2 155 50.3
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 4.4e-30 135.2 155 50.3
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 5.8e-30 134.8 150 51.3
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 7.6e-30 134.4 153 51.0
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.3e-29 133.7 120 55.8
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 2.2e-29 132.9 120 55.8
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 2.2e-29 132.9 120 55.8
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 2.9e-29 132.5 148 50.0
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 2.9e-29 132.5 159 47.8
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 1.9e-28 129.8 121 57.9
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 1.9e-28 129.8 133 54.9
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 3.2e-28 129.0 161 47.8
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 3.2e-28 129.0 171 48.0
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 4.1e-28 128.6 120 57.5
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 4.1e-28 128.6 149 49.7
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 5.4e-28 128.3 126 54.0
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 5.4e-28 128.3 169 47.9
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 9.2e-28 127.5 148 49.3
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 9.2e-28 127.5 126 56.3
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.2e-27 127.1 171 46.2
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 1.2e-27 127.1 126 54.8
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 2.7e-27 125.9 155 51.0
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 3.5e-27 125.6 118 55.9
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 4.6e-27 125.2 156 51.3
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 4.6e-27 125.2 166 46.4
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 6.0e-27 124.8 120 55.0
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.8e-27 124.4 126 53.2
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 1.7e-26 123.2 177 47.5
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 6.6e-26 121.3 126 54.0
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 1.5e-25 120.2 150 48.0
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.9e-25 119.8 122 51.6
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 5.6e-25 118.2 105 58.1
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 7.3e-25 117.9 132 52.3
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 9.6e-25 117.5 120 53.3
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 9.6e-25 117.5 120 53.3
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 2.1e-24 116.3 120 51.7
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 2.8e-24 115.9 121 52.1
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 2.8e-24 115.9 121 52.1
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.7e-24 115.2 147 49.0
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 4.7e-24 115.2 126 52.4
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 4.7e-24 115.2 172 44.2
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 8.1e-24 114.4 169 44.4
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 1.1e-23 114.0 120 52.5
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 1.1e-23 114.0 169 45.6
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 1.1e-23 114.0 115 56.5
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 1.4e-23 113.6 162 48.8
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 1.8e-23 113.2 126 52.4
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 2.4e-23 112.8 130 53.1
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 4.0e-23 112.1 129 53.5
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 5.2e-23 111.7 104 51.9
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 6.8e-23 111.3 129 51.9
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 1.5e-22 110.2 92 59.8
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 2.6e-22 109.4 126 47.6
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.6e-22 109.4 113 58.4
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 3.4e-22 109.0 172 41.9
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 4.4e-22 108.6 174 44.3
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 4.4e-22 108.6 99 58.6
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 4.4e-22 108.6 170 43.5
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 7.6e-22 107.8 126 49.2
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 9.9e-22 107.5 154 43.5
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 1.7e-21 106.7 134 46.3
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 8.4e-21 104.4 122 50.8
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 8.4e-21 104.4 168 41.1
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 8.4e-21 104.4 152 44.1
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 1.1e-20 104.0 120 47.5
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 3.2e-20 102.4 129 46.5
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 3.2e-20 102.4 125 46.4
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 4.2e-20 102.1 158 42.4
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 5.4e-20 101.7 120 44.2
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 7.1e-20 101.3 121 47.1
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 7.1e-20 101.3 121 47.1
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 7.1e-20 101.3 121 47.1
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 1.2e-19 100.5 129 45.7
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 1.6e-19 100.1 121 46.3
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 6.0e-19 98.2 135 42.2
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 6.0e-19 98.2 119 43.7
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.1e-17 94.0 81 56.8
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 4.3e-17 92.0 120 44.2
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 5.6e-17 91.7 133 41.4
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 7.3e-17 91.3 60 73.3
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.3e-17 91.3 114 49.1
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 2.8e-16 89.4 119 43.7
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 4.8e-16 88.6 120 43.3
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 4.8e-16 88.6 100 55.0
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.1e-15 87.4 165 39.4
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 1.8e-15 86.7 168 39.9
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 9.0e-15 84.3 120 40.8
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.2e-14 84.0 104 49.0
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.2e-14 84.0 104 49.0
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 1.5e-14 83.6 119 42.9
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.0e-14 83.2 96 49.0
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.3e-13 80.5 55 67.3
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.3e-13 80.5 55 67.3
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 5.4e-12 75.1 142 40.1
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.2e-11 73.9 47 63.8
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 1.6e-11 73.6 69 52.2
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.1e-11 73.2 97 45.4
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 2.7e-11 72.8 108 38.0
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 3.5e-11 72.4 91 40.7
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.7e-10 70.1 111 38.7
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 5.6e-09 65.1 66 40.9
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 9.6e-09 64.3 65 56.9
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 1.3e-08 63.9 39 76.9
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 2.8e-08 62.8 42 71.4
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 3.1e-07 59.3 111 33.3
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 4.0e-07 58.9 67 41.8
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 7.6e-06 54.7 39 64.1
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 7.6e-06 54.7 39 64.1


User provided reference genes

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