Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 4.9e-140 501.1 255 100.0
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 1.4e-94 350.1 215 82.8
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 9.1e-94 347.4 194 87.1
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 7.2e-91 337.8 229 73.4
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 3.6e-90 335.5 251 68.5
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.4e-89 333.6 229 73.4
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 6.8e-89 331.3 229 72.9
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 8.8e-89 330.9 229 72.9
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.2e-88 330.5 229 72.5
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 2.0e-88 329.7 240 68.8
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.6e-88 329.3 229 72.5
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 4.1e-86 322.0 232 72.0
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 4.1e-86 322.0 192 79.7
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.7e-85 319.3 215 75.3
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 7.7e-85 317.8 195 79.0
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.7e-84 316.6 230 67.4
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 2.2e-84 316.2 230 69.6
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 2.9e-84 315.8 218 72.9
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 3.2e-83 312.4 212 75.5
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 9.4e-83 310.8 216 72.2
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.7e-82 309.3 220 70.5
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 6.1e-82 308.1 192 77.1
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 8.0e-82 307.8 231 68.0
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 2.3e-81 306.2 188 78.2
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 2.3e-81 306.2 192 77.6
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 5.7e-80 301.6 216 68.5
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 5.7e-80 301.6 215 69.3
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 7.5e-80 301.2 227 68.3
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 9.8e-80 300.8 184 80.4
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 9.8e-80 300.8 222 71.2
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 2.2e-79 299.7 217 69.1
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 6.3e-79 298.1 203 72.9
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 6.3e-79 298.1 184 79.9
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.1e-78 297.4 194 72.7
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.4e-78 297.0 229 66.4
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 7.0e-78 294.7 185 77.8
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 4.5e-77 292.0 198 73.2
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 1.0e-76 290.8 233 63.1
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 1.3e-76 290.4 191 73.8
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 6.6e-76 288.1 176 79.5
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 1.1e-75 287.3 192 74.5
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.9e-75 286.6 212 67.5
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 3.3e-75 285.8 206 69.4
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 9.5e-75 284.3 195 72.8
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.2e-74 283.9 212 67.0
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 2.8e-74 282.7 178 78.1
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 8.0e-74 281.2 242 62.4
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 8.0e-74 281.2 192 72.4
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 5.2e-73 278.5 220 64.1
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 2.0e-72 276.6 206 67.0
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 2.6e-72 276.2 182 72.0
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 3.4e-72 275.8 182 72.0
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 3.4e-72 275.8 228 61.0
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 3.4e-72 275.8 225 62.2
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 3.4e-72 275.8 194 69.6
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 4.4e-72 275.4 213 64.3
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 4.4e-72 275.4 193 69.9
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 4.4e-72 275.4 219 64.8
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 7.5e-72 274.6 213 64.8
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 7.5e-72 274.6 189 70.9
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.3e-71 273.9 220 65.5
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 2.8e-71 272.7 219 63.9
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 2.8e-71 272.7 219 63.9
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 3.7e-71 272.3 213 64.3
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 4.9e-71 271.9 206 66.0
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 4.9e-71 271.9 209 66.0
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 1.1e-70 270.8 205 64.4
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.1e-70 270.8 213 64.3
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 1.1e-70 270.8 216 63.0
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 1.4e-70 270.4 216 63.4
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.4e-70 270.4 217 63.6
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 1.4e-70 270.4 202 65.8
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.8e-70 270.0 208 64.9
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 3.2e-70 269.2 190 69.5
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 7.0e-70 268.1 184 69.6
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 7.0e-70 268.1 180 71.7
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.6e-69 266.9 198 68.2
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 1.6e-69 266.9 183 71.6
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.7e-69 266.2 216 65.3
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.8e-66 256.1 276 52.5
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 1.8e-65 253.4 181 71.8
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 2.0e-64 250.0 174 72.4
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 2.2e-63 246.5 174 71.3
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 2.0e-61 240.0 210 58.6
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 1.6e-58 230.3 194 64.4
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 6.2e-58 228.4 158 72.8
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 2.3e-57 226.5 216 56.0
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 8.9e-57 224.6 174 65.5
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.5e-56 223.8 204 60.3
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.9e-55 218.8 202 59.9
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 5.1e-52 208.8 140 72.9
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 8.6e-52 208.0 180 62.2
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 2.5e-51 206.5 178 63.5
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 7.3e-51 204.9 179 59.2
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 2.1e-50 203.4 127 76.4
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 3.6e-50 202.6 184 59.2
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 8.9e-49 198.0 129 74.4
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.2e-45 187.6 122 74.6
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.0e-44 184.5 119 75.6
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 1.6e-42 177.2 145 64.8
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.4e-41 173.3 107 79.4
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 4.0e-41 172.6 155 57.4
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 9.9e-40 167.9 204 47.5
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 9.9e-40 167.9 129 66.7
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 6.4e-39 165.2 177 50.3
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.9e-38 163.7 107 77.6
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 6.0e-37 158.7 107 74.8
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.9e-35 153.7 106 70.8
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.5e-35 153.3 98 78.6
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 4.6e-29 132.5 91 67.0
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 3.6e-26 122.9 168 43.5
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 2.4e-25 120.2 152 46.7
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 1.4e-17 94.4 181 39.8
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 9.0e-17 91.7 57 71.9
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 8.4e-15 85.1 58 69.0
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 1.1e-14 84.7 49 75.5
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 1.2e-13 81.3 45 80.0
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 7.4e-11 72.0 112 41.1
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 2.8e-10 70.1 80 43.8
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.8e-09 67.4 48 62.5
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 1.5e-08 64.3 43 67.4
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 3.8e-07 59.7 47 57.4
CDE04G0330 Ceratophyllum demersum HOM05D000040 ORTHO05D007887 5.5e-06 55.8 35 68.6


User provided reference genes

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