Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02460 Corylus avellana HOM05D009338 ORTHO05D010862 1.5e-37 159.1 82 100.0
Cfa004949 Carpinus fangiana HOM05D009338 ORTHO05D010862 5.1e-30 134.0 83 86.7
QL11p039270 Quercus lobata HOM05D009338 ORTHO05D010862 3.5e-15 84.7 79 59.5
Gohir.A03G213900 Gossypium hirsutum HOM05D009338 ORTHO05D010862 4.8e-12 74.3 80 56.2
Manes.17G096800 Manihot esculenta HOM05D009338 ORTHO05D010862 1.8e-11 72.4 85 52.9
CiPaw.05G058900 Carya illinoinensis HOM05D009338 ORTHO05D010862 3.1e-11 71.6 84 54.8
Potri.009G109200 Populus trichocarpa HOM05D009338 ORTHO05D010862 4.0e-11 71.2 85 52.9
Gohir.D02G235500 Gossypium hirsutum HOM05D009338 ORTHO05D010862 5.3e-11 70.9 81 50.6
Gorai.005G263600 Gossypium raimondii HOM05D009338 ORTHO05D010862 5.3e-11 70.9 81 50.6
CSS0015548 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 6.9e-11 70.5 80 53.8
Sabra09G0083400 Salix brachista HOM05D009338 ORTHO05D010862 1.5e-10 69.3 85 49.4
Potri.004G148100 Populus trichocarpa HOM05D009338 ORTHO05D010862 2.0e-10 68.9 85 52.9
Thecc.02G028800 Theobroma cacao HOM05D009338 ORTHO05D010862 2.6e-10 68.6 80 50.0
Gohir.D02G235400 Gossypium hirsutum HOM05D009338 ORTHO05D010862 4.5e-10 67.8 80 51.2
Potri.004G147966 Populus trichocarpa HOM05D009338 ORTHO05D010862 4.5e-10 67.8 80 55.0
Gorai.005G263500 Gossypium raimondii HOM05D009338 ORTHO05D010862 5.8e-10 67.4 80 51.2
Dinv42107 Davidia involucrata HOM05D004625 ORTHO05D006054 1.0e-09 66.6 79 51.9
Gohir.A03G214000 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.0e-09 66.6 80 50.0
Ciclev10029719m.g Citrus clementina HOM05D009338 ORTHO05D010862 1.7e-09 65.9 86 48.8
Phvul.011G050200 Phaseolus vulgaris HOM05D016074 ORTHO05D010862 3.8e-09 64.7 79 46.8
TAR628G0903 Trochodendron aralioides HOM05D009338 ORTHO05D010862 3.8e-09 64.7 80 50.0
Sabra04G0098100 Salix brachista HOM05D004625 ORTHO05D006054 1.1e-08 63.2 85 45.9
CSS0004539 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 1.9e-08 62.4 80 50.0
Ciclev10029668m.g Citrus clementina HOM05D009338 ORTHO05D010862 3.2e-08 61.6 96 44.8
CiPaw.06G139200 Carya illinoinensis HOM05D009338 ORTHO05D010862 4.2e-08 61.2 88 50.0
Thecc.02G028900 Theobroma cacao HOM05D009338 ORTHO05D010862 1.3e-06 56.2 81 46.9
Glyma.11G123400 Glycine max HOM05D016074 ORTHO05D010862 3.0e-06 55.1 79 41.8
Prupe.8G112400 Prunus persica HOM05D026488 ORTHO05D029694 3.0e-06 55.1 83 47.0
Nn5g29412 Nelumbo nucifera HOM05D009338 ORTHO05D010862 3.9e-06 54.7 79 43.0
DCAR_029008 Daucus carota HOM05D009338 ORTHO05D010862 6.7e-06 53.9 82 39.0
Aqoxy6G00946 Aquilegia oxysepala HOM05D009338 ORTHO05D010862 8.7e-06 53.5 77 44.2
Cpa.g.sc62.85 Carica papaya HOM05D009338 ORTHO05D010862 8.7e-06 53.5 84 48.8


User provided reference genes

Program Settings