Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 1.8e-146 522.7 290 100.0
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 1.7e-112 409.8 212 97.6
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 5.5e-111 404.8 304 75.0
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 9.6e-108 394.0 205 97.6
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 2.7e-102 375.9 335 66.6
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 2.1e-94 349.7 300 69.0
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 4.1e-90 335.5 299 62.5
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 1.3e-88 330.5 214 80.4
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 9.4e-87 324.3 294 58.8
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.2e-86 323.9 295 59.0
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 4.7e-86 322.0 301 62.1
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 1.4e-85 320.5 303 64.7
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 3.9e-85 318.9 301 58.5
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 6.7e-85 318.2 301 58.1
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 2.0e-84 316.6 297 59.3
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.7e-83 313.5 293 65.5
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 1.7e-83 313.5 300 57.7
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 3.7e-83 312.4 329 55.6
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 2.4e-82 309.7 303 58.7
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 3.1e-82 309.3 290 64.1
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 4.5e-81 305.4 297 60.9
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 7.7e-81 304.7 295 58.3
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 3.2e-79 299.3 304 54.3
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 1.2e-78 297.4 320 52.2
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 2.7e-78 296.2 307 58.3
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 2.7e-78 296.2 302 57.3
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 6.1e-78 295.0 299 56.9
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.0e-77 294.3 296 55.1
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 5.2e-77 292.0 321 57.9
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 6.7e-77 291.6 325 51.1
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 6.7e-77 291.6 297 54.9
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 2.0e-76 290.0 305 53.1
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 3.3e-76 289.3 304 53.3
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 3.3e-76 289.3 303 56.4
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 1.7e-75 287.0 320 51.9
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 8.2e-75 284.6 325 52.6
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 1.4e-74 283.9 325 52.3
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 1.8e-74 283.5 294 54.1
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 1.8e-74 283.5 305 53.1
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 1.8e-74 283.5 318 51.9
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 2.4e-74 283.1 300 52.0
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 4.1e-74 282.3 308 55.8
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 1.6e-73 280.4 312 58.0
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 4.5e-73 278.9 307 53.7
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 4.5e-73 278.9 299 60.2
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 1.7e-72 276.9 296 59.5
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 2.9e-72 276.2 307 57.0
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 5.0e-72 275.4 293 61.4
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 5.0e-72 275.4 317 52.4
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 5.0e-72 275.4 317 52.1
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 6.5e-72 275.0 308 60.1
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 1.9e-71 273.5 318 50.3
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 3.2e-71 272.7 317 51.4
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.1e-70 270.0 211 64.9
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 1.0e-69 267.7 298 51.3
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 2.3e-69 266.5 349 49.0
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 4.0e-69 265.8 325 50.5
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 6.8e-69 265.0 341 46.9
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 8.8e-69 264.6 311 55.6
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 2.0e-68 263.5 293 52.2
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 6.3e-67 258.5 361 45.7
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 1.4e-66 257.3 297 49.8
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 1.8e-66 256.9 312 52.2
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 7.0e-66 255.0 275 53.5
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 2.7e-65 253.1 301 49.5
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 3.5e-65 252.7 311 52.7
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 3.5e-65 252.7 298 49.3
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 1.7e-64 250.4 302 48.3
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 1.7e-64 250.4 301 48.5
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 2.2e-64 250.0 318 45.9
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 3.8e-64 249.2 324 49.7
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 6.5e-64 248.4 221 60.6
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 6.1e-62 241.9 311 49.2
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 1.8e-61 240.4 311 46.3
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 2.3e-61 240.0 294 49.0
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 4.0e-61 239.2 302 48.3
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 4.0e-61 239.2 301 49.5
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 5.2e-61 238.8 305 46.2
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 1.2e-60 237.7 313 46.6
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 1.5e-60 237.3 303 49.5
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 2.0e-60 236.9 295 48.5
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 3.4e-60 236.1 301 49.2
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 3.4e-60 236.1 294 47.6
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 5.7e-60 235.3 306 47.1
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 7.5e-60 235.0 319 45.5
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 1.7e-59 233.8 311 46.3
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 3.7e-59 232.6 306 45.8
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 6.3e-59 231.9 315 43.8
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 2.4e-58 229.9 296 46.6
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 5.4e-58 228.8 308 44.2
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 1.2e-57 227.6 295 45.1
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 2.0e-57 226.9 290 50.3
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 4.5e-57 225.7 306 47.1
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 1.0e-56 224.6 297 46.5
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 2.3e-56 223.4 293 46.1
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 2.9e-56 223.0 295 51.9
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 2.9e-56 223.0 297 46.1
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 3.8e-56 222.6 300 46.3
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 3.8e-56 222.6 300 46.3
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 8.6e-56 221.5 302 43.0
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 1.1e-55 221.1 216 58.3
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 1.5e-55 220.7 304 47.7
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 1.5e-55 220.7 304 47.7
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 3.3e-55 219.5 312 47.4
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 1.2e-54 217.6 295 45.1
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 4.7e-54 215.7 292 46.9
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 8.0e-54 214.9 321 42.4
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 8.0e-54 214.9 321 42.4
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 8.0e-54 214.9 321 42.4
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 1.8e-53 213.8 300 43.3
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 8.9e-53 211.5 321 42.7
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 1.5e-52 210.7 297 43.8
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 5.7e-52 208.8 312 44.2
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 2.9e-51 206.5 296 42.6
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 2.4e-50 203.4 302 45.0
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 2.4e-50 203.4 303 45.2
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 1.6e-49 200.7 274 48.5
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 2.0e-49 200.3 300 43.7
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 2.7e-49 199.9 304 45.7
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 8.0e-46 188.3 265 41.9
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 8.0e-46 188.3 300 42.7
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 6.8e-45 185.3 293 41.6
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 5.8e-44 182.2 326 39.3
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 1.7e-43 180.6 308 39.6
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 4.6e-41 172.6 268 49.6
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 3.9e-40 169.5 259 39.4
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 4.0e-37 159.5 175 58.3
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 5.2e-37 159.1 364 33.8
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 4.4e-36 156.0 293 37.5
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 9.8e-36 154.8 325 36.0
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 8.3e-35 151.8 309 35.9
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 1.0e-32 144.8 147 54.4
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 5.8e-28 129.0 302 35.1
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 5.8e-28 129.0 302 35.1
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 1.3e-24 117.9 175 44.6
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 1.5e-23 114.4 153 45.1
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 2.8e-22 110.2 368 28.5
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 4.0e-21 106.3 92 62.0
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.2e-19 100.5 348 30.2
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.4e-19 99.0 273 31.5
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 2.4e-18 97.1 132 47.0
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 5.4e-18 95.9 156 39.7
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 5.4e-18 95.9 355 29.6
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 4.6e-17 92.8 335 27.8
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 5.1e-16 89.4 374 24.9
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 7.3e-15 85.5 323 29.1
unitig_21.g20770 Utricularia gibba HOM05D000370 ORTHO05D001335 1.6e-14 84.3 250 31.2
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.4e-13 81.3 370 24.1
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 2.6e-12 77.0 123 38.2
QL11p040051 Quercus lobata HOM05D001401 ORTHO05D006368 2.9e-11 73.6 67 74.6
FAN15G1877 Fragaria x ananassa HOM05D001401 ORTHO05D006368 6.4e-11 72.4 40 87.5
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 8.4e-11 72.0 54 74.1
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 1.1e-10 71.6 87 50.6
FAN15G3283 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.5e-07 60.5 69 49.3
SEGI_17958 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 6.2e-06 55.8 170 26.5


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