Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02310 Corylus avellana HOM05D007387 ORTHO05D009321 4.1e-68 261.5 161 100.0
Cfa005072 Carpinus fangiana HOM05D007387 ORTHO05D009321 2.3e-18 96.3 82 95.1
FAN15G3112 Fragaria x ananassa HOM05D007387 ORTHO05D009321 1.4e-10 70.5 42 78.6
FvH4_2g10040 Fragaria vesca HOM05D007387 ORTHO05D009321 2.3e-10 69.7 42 78.6
FAN24G0663 Fragaria x ananassa HOM05D007387 ORTHO05D009321 2.3e-10 69.7 42 78.6
Gohir.A04G124100 Gossypium hirsutum HOM05D007387 ORTHO05D009321 3.0e-10 69.3 42 81.0
Gohir.D04G166200 Gossypium hirsutum HOM05D007387 ORTHO05D009321 3.0e-10 69.3 42 81.0
Gorai.012G154600 Gossypium raimondii HOM05D007387 ORTHO05D009321 3.0e-10 69.3 42 81.0
Phvul.011G041100 Phaseolus vulgaris HOM05D007387 ORTHO05D009321 3.9e-10 68.9 41 80.5
Cpa.g.sc139.28 Carica papaya HOM05D007387 ORTHO05D009321 5.2e-10 68.6 41 82.9
FAN27G1365 Fragaria x ananassa HOM05D007387 ORTHO05D009321 6.7e-10 68.2 42 76.2
ClCG02G004690 Citrullus lanatus HOM05D007387 ORTHO05D009321 1.5e-09 67.0 38 84.2
MELO3C013435.2 Cucumis melo HOM05D007387 ORTHO05D009321 1.5e-09 67.0 38 84.2
CsaV3_7G000220 Cucumis sativus L. HOM05D007387 ORTHO05D009321 1.5e-09 67.0 38 84.2
Prupe.8G088200 Prunus persica HOM05D007387 ORTHO05D009321 1.5e-09 67.0 40 80.0
Sabra04G0107500 Salix brachista HOM05D007387 ORTHO05D009321 1.5e-09 67.0 42 76.2
Sed0000236 Sechium edule HOM05D007387 ORTHO05D009321 1.5e-09 67.0 38 84.2
FAN15G0178 Fragaria x ananassa HOM05D007387 ORTHO05D009321 2.6e-09 66.2 42 73.8
MD10G1066200 Malus domestica HOM05D007387 ORTHO05D009321 2.6e-09 66.2 41 78.0
Sed0010335 Sechium edule HOM05D007387 ORTHO05D009321 3.3e-09 65.9 38 81.6
Ca_20916_v3 Cicer arietinum L. HOM05D007387 ORTHO05D009321 4.4e-09 65.5 38 78.9
VMungo1127G0459 Vigna mungo HOM05D007387 ORTHO05D009321 4.4e-09 65.5 40 77.5
Lj3g0012874 Lotus japonicus HOM05D007387 ORTHO05D009321 5.7e-09 65.1 39 76.9
Potri.009G121700 Populus trichocarpa HOM05D007387 ORTHO05D009321 5.7e-09 65.1 41 75.6
Medtr4g071120 Medicago truncatula HOM05D007387 ORTHO05D009321 1.3e-08 63.9 37 81.1
Psat7g182600 Pisum sativum HOM05D007387 ORTHO05D009321 1.3e-08 63.9 37 81.1
RcHm_v2.0_Chr6g0266971 Rosa chinensis HOM05D007387 ORTHO05D009321 1.3e-08 63.9 40 75.0
Sabra09G0094000 Salix brachista HOM05D007387 ORTHO05D009321 1.3e-08 63.9 41 75.6
FAN20G0098 Fragaria x ananassa HOM05D007387 ORTHO05D009321 1.7e-08 63.5 42 71.4
Glyma.12G039000 Glycine max HOM05D007387 ORTHO05D009321 1.7e-08 63.5 40 77.5
FAN21G1657 Fragaria x ananassa HOM05D007387 ORTHO05D009321 2.8e-08 62.8 42 69.0
FAN25G2925 Fragaria x ananassa HOM05D007387 ORTHO05D009321 2.8e-08 62.8 42 71.4
TWI31G1242 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 3.7e-08 62.4 42 69.0
Gohir.A12G041900 Gossypium hirsutum HOM05D007387 ORTHO05D009321 4.8e-08 62.0 44 75.0
MD05G1058600 Malus domestica HOM05D007387 ORTHO05D009321 4.8e-08 62.0 40 77.5
Manes.11G087600 Manihot esculenta HOM05D007387 ORTHO05D009321 4.8e-08 62.0 40 75.0
Gohir.D12G030300 Gossypium hirsutum HOM05D007387 ORTHO05D009321 6.3e-08 61.6 44 75.0
Potri.004G160700 Populus trichocarpa HOM05D007387 ORTHO05D009321 6.3e-08 61.6 40 75.0
Duzib248G1112 Durio zibethinus HOM05D007387 ORTHO05D009321 8.2e-08 61.2 38 78.9
Glyma.11G113100 Glycine max HOM05D007387 ORTHO05D009321 8.2e-08 61.2 40 75.0
Lalb_Chr19g0138881 Lupinus albus HOM05D007387 ORTHO05D009321 8.2e-08 61.2 37 75.7
Atru.chr5.3107 Acer truncatum HOM05D007387 ORTHO05D009321 1.1e-07 60.8 41 75.6
Thecc.02G078400 Theobroma cacao HOM05D007387 ORTHO05D009321 1.1e-07 60.8 37 81.1
Actinidia00563 Actinidia chinensis HOM05D001785 ORTHO05D001933 1.4e-07 60.5 39 74.4
CiPaw.06G131100 Carya illinoinensis HOM05D007387 ORTHO05D009321 1.4e-07 60.5 37 78.4
arahy.Tifrunner.gnm1.ann1.TWZZ0X Arachis hypogaea HOM05D007387 ORTHO05D009321 1.8e-07 60.1 40 72.5
arahy.Tifrunner.gnm1.ann1.WH0Y0U Arachis hypogaea HOM05D007387 ORTHO05D009321 1.8e-07 60.1 40 72.5
TWI79G0383 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 1.8e-07 60.1 42 69.0
QL11p045571 Quercus lobata HOM05D007387 ORTHO05D009321 2.4e-07 59.7 43 72.1
Actinidia11742 Actinidia chinensis HOM05D007387 ORTHO05D009321 3.1e-07 59.3 38 76.3
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 3.1e-07 59.3 41 73.2
Duzib132G0100 Durio zibethinus HOM05D007387 ORTHO05D009321 4.1e-07 58.9 40 72.5
Dinv42018 Davidia involucrata HOM05D007387 ORTHO05D009321 7.0e-07 58.2 41 70.7
Lalb_Chr03g0025431 Lupinus albus HOM05D007387 ORTHO05D009321 7.0e-07 58.2 37 75.7
Aa31LG2G15890 Aethionema arabicum HOM05D007387 ORTHO05D009321 9.1e-07 57.8 42 69.0
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.2e-06 57.4 41 70.7
Ciclev10029309m.g Citrus clementina HOM05D007387 ORTHO05D009321 1.6e-06 57.0 37 75.7
FvH4_4g16763 Fragaria vesca HOM05D007387 ORTHO05D009321 1.6e-06 57.0 35 74.3
Oeu008575.1 Olea europaea HOM05D007387 ORTHO05D009321 1.6e-06 57.0 42 61.9
THA.LOC104807296 Tarenaya hassleriana HOM05D007387 ORTHO05D009321 1.6e-06 57.0 37 78.4
Cc02_g17100 Coffea canephora HOM05D007387 ORTHO05D009321 2.0e-06 56.6 40 72.5
Eucgr.I01309 Eucalyptus grandis HOM05D007387 ORTHO05D009321 2.0e-06 56.6 37 78.4
Solyc01g110150.2 Solanum lycopersicum HOM05D007387 ORTHO05D009321 2.0e-06 56.6 38 73.7
TPR.G30501 Trifolium pratense HOM05D000711 ORTHO05D000545 2.0e-06 56.6 49 61.2
PGR142G2532 Punica granatum HOM05D007387 ORTHO05D009321 4.5e-06 55.5 37 75.7
PGSC0003DMG400030970 Solanum tuberosum HOM05D007387 ORTHO05D009321 4.5e-06 55.5 38 71.1
BcaNung00681 Brassica carinata HOM05D007387 ORTHO05D009321 5.9e-06 55.1 42 66.7
A01p03860 Brassica napus HOM05D007387 ORTHO05D009321 5.9e-06 55.1 42 66.7
C01p04170 Brassica napus HOM05D007387 ORTHO05D009321 5.9e-06 55.1 42 66.7
BolC1t00405H Brassica oleracea HOM05D007387 ORTHO05D009321 5.9e-06 55.1 42 66.7
BraA01t00373Z Brassica rapa HOM05D007387 ORTHO05D009321 5.9e-06 55.1 42 66.7
Sp7g32420 Schrenkiella parvula HOM05D007387 ORTHO05D009321 5.9e-06 55.1 42 66.7
vmacro02067 Vaccinium macrocarpon HOM05D007387 ORTHO05D009321 5.9e-06 55.1 38 71.1


User provided reference genes

Program Settings