Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 4.3e-184 647.9 333 100.0
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 1.2e-130 470.3 321 79.8
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 5.6e-128 461.5 315 79.4
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 8.2e-119 431.0 319 74.6
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 1.2e-114 417.2 309 73.5
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 1.1e-112 410.6 308 72.7
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 2.8e-111 406.0 284 77.5
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 6.3e-111 404.8 321 70.1
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 1.1e-110 404.1 309 72.5
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 2.0e-109 399.8 286 76.9
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 4.5e-109 398.7 307 72.0
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 4.5e-109 398.7 336 66.4
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 5.9e-109 398.3 329 68.7
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 2.2e-108 396.4 244 84.8
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 6.5e-108 394.8 289 73.0
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 6.5e-108 394.8 308 70.1
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 1.1e-107 394.0 319 67.4
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 1.9e-107 393.3 317 68.8
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 4.2e-107 392.1 309 70.6
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 7.2e-107 391.3 306 71.2
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 3.6e-106 389.0 318 67.3
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 3.6e-106 389.0 279 74.9
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 7.9e-106 387.9 310 68.1
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 1.0e-105 387.5 306 69.0
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 1.8e-105 386.7 277 76.2
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 3.9e-105 385.6 309 70.2
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 2.6e-104 382.9 279 74.6
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 2.6e-104 382.9 311 66.9
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 9.7e-104 380.9 311 66.2
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 2.8e-103 379.4 277 74.7
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 4.8e-103 378.6 332 66.0
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 6.3e-103 378.3 322 65.2
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 6.3e-103 378.3 322 65.5
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 2.4e-102 376.3 333 65.2
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 2.4e-102 376.3 313 65.8
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 3.1e-102 375.9 295 70.2
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 4.1e-102 375.6 308 68.2
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 7.0e-102 374.8 268 73.1
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 3.8e-100 369.0 298 68.8
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 6.5e-100 368.2 283 68.6
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 2.5e-99 366.3 284 69.4
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 5.5e-99 365.2 290 70.0
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 7.2e-99 364.8 322 63.7
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.6e-98 363.6 359 59.1
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 2.1e-98 363.2 344 58.1
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 3.6e-98 362.5 341 62.2
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 6.1e-98 361.7 286 68.2
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 6.1e-98 361.7 289 70.6
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 1.4e-97 360.5 356 59.8
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 1.4e-97 360.5 292 67.5
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 1.4e-97 360.5 279 70.3
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 3.0e-97 359.4 329 61.1
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 6.7e-97 358.2 345 58.6
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 8.8e-97 357.8 287 68.3
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 8.8e-97 357.8 273 70.3
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 8.8e-97 357.8 289 67.1
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 1.1e-96 357.5 297 68.0
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 1.5e-96 357.1 297 64.3
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 1.5e-96 357.1 321 60.4
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 1.5e-96 357.1 283 67.1
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 4.4e-96 355.5 314 61.1
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 5.7e-96 355.1 302 63.2
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 9.7e-96 354.4 273 70.0
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 9.7e-96 354.4 324 62.0
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 1.3e-95 354.0 322 62.1
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 4.8e-95 352.1 305 63.0
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 1.4e-94 350.5 284 69.4
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 2.4e-94 349.7 339 60.8
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 4.1e-94 349.0 319 61.1
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 5.3e-94 348.6 290 65.2
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 7.0e-94 348.2 327 59.3
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 9.1e-94 347.8 326 59.2
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 9.1e-94 347.8 294 64.6
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 2.0e-93 346.7 289 66.4
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 2.6e-93 346.3 323 59.1
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 4.5e-93 345.5 305 63.3
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 5.9e-93 345.1 286 67.1
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 1.3e-92 344.0 324 59.0
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 1.7e-92 343.6 276 67.0
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 1.1e-91 340.9 275 68.0
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 1.1e-91 340.9 257 69.6
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.9e-91 340.1 255 74.1
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 1.4e-89 334.0 274 69.0
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 1.5e-88 330.5 278 68.0
Cfa005074 Carpinus fangiana HOM05D005703 ORTHO05D006643 4.4e-88 328.9 232 79.7
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 7.5e-88 328.2 278 64.0
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.4e-86 323.9 281 65.8
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 1.7e-84 317.0 197 83.8
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 1.9e-83 313.5 216 74.1
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 9.1e-78 294.7 256 64.1
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 5.0e-76 288.9 198 73.2
CANSAT11G2682 Cannabis sativa HOM05D005703 ORTHO05D006643 8.0e-74 281.6 311 56.3
Sed0007704 Sechium edule HOM05D005703 ORTHO05D006643 1.8e-73 280.4 235 68.5
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 6.3e-71 271.9 260 58.8
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 8.3e-71 271.6 319 52.7
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 1.2e-69 267.7 323 46.1
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 1.2e-64 251.1 278 48.6
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 4.4e-64 249.2 207 65.7
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 4.1e-54 216.1 302 43.4
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 2.1e-53 213.8 204 55.4
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 6.0e-53 212.2 202 55.4
TAR381G0871 Trochodendron aralioides HOM05D005703 ORTHO05D006643 4.0e-49 199.5 134 76.9
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 9.9e-48 194.9 202 53.0
Gohir.A12G041600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 7.1e-46 188.7 131 77.1
MBI01_g29867_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 8.6e-44 181.8 139 70.5
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 1.5e-43 181.0 144 68.1
AagrBONN_evm.TU.Sc2ySwM_228.378 Anthoceros agrestis HOM05D005703 ORTHO05D006643 5.6e-43 179.1 200 55.0
C01p09750 Brassica napus HOM05D005703 ORTHO05D006643 2.2e-39 167.2 186 53.2
Thhalv10005656m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 2.7e-37 160.2 156 59.0
BolC2t11489H Brassica oleracea HOM05D005703 ORTHO05D006643 1.1e-35 154.8 185 50.3
BolC4t23697H Brassica oleracea HOM05D005703 ORTHO05D006643 5.6e-35 152.5 188 48.4
BcaC04g19425 Brassica carinata HOM05D005703 ORTHO05D006643 3.1e-33 146.7 225 44.4
C09p55850 Brassica napus HOM05D005703 ORTHO05D006643 2.0e-32 144.1 214 44.4
Potri.009G121902 Populus trichocarpa HOM05D005703 ORTHO05D006643 2.0e-32 144.1 104 75.0
C04p21760 Brassica napus HOM05D005703 ORTHO05D006643 4.4e-32 142.9 212 43.9
QL11p045593 Quercus lobata HOM05D005703 ORTHO05D006643 1.3e-31 141.4 73 93.2
C02p54250 Brassica napus HOM05D005703 ORTHO05D006643 7.9e-29 132.1 214 43.0
BcaC01g06448 Brassica carinata HOM05D005703 ORTHO05D006643 8.7e-28 128.6 136 55.9
HanXRQChr14g0433731 Helianthus annuus HOM05D005703 ORTHO05D006643 3.6e-26 123.2 79 84.8
SEGI_33335 Sequoiadendron giganteum HOM05D005703 ORTHO05D006643 2.1e-21 107.5 90 58.9
CBR_g49480 Chara braunii HOM05D005703 ORTHO05D006643 2.5e-19 100.5 212 31.6
PRCOL_00000952 Prasinoderma coloniale HOM05D005703 ORTHO05D006643 1.4e-17 94.7 197 31.5
BcaC09g52221 Brassica carinata HOM05D005703 ORTHO05D006643 9.0e-17 92.0 78 64.1
C03p15450 Brassica napus HOM05D005703 ORTHO05D006643 1.2e-16 91.7 151 40.4
Cre08.g372000 Chlamydomonas reinhardtii HOM05D005703 ORTHO05D006643 2.9e-15 87.0 213 31.0
C03p56750 Brassica napus HOM05D005703 ORTHO05D006643 2.5e-14 84.0 128 40.6
BolC1t00936H Brassica oleracea HOM05D005703 ORTHO05D006643 4.2e-14 83.2 61 68.9
C03p56740 Brassica napus HOM05D005703 ORTHO05D006643 7.1e-14 82.4 77 58.4
Lsat_1_v5_gn_1_61800 Lactuca sativa HOM05D005428 ORTHO05D002547 1.5e-11 74.7 57 70.2
TAR381G1022 Trochodendron aralioides HOM05D005703 ORTHO05D006643 5.3e-09 66.2 67 55.2
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 6.9e-09 65.9 36 88.9
MCO02G267 Micromonas commoda HOM05D005703 ORTHO05D006643 1.1e-06 58.5 148 28.4
Cc02_g17080 Coffea canephora HOM05D005703 ORTHO05D006643 4.2e-06 56.6 47 63.8


User provided reference genes

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