Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 0.0e+00 2025.8 987 100.0
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 2.3e-241 839.7 514 80.5
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 1.1e-230 804.3 489 81.8
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 5.4e-219 765.4 512 75.2
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 8.7e-217 758.1 530 73.6
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 1.3e-212 744.2 519 72.8
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 8.4e-212 741.5 508 72.8
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 9.3e-211 738.0 529 71.5
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 7.8e-210 734.9 510 73.1
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 7.8e-210 734.9 509 73.1
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 7.8e-210 734.9 505 72.7
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.7e-209 733.8 499 73.1
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.7e-209 733.8 512 72.5
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 3.3e-208 729.6 463 78.4
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 4.3e-208 729.2 517 72.1
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 4.3e-208 729.2 536 70.5
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 9.6e-208 728.0 493 73.8
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.3e-207 727.6 516 72.1
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.6e-207 726.1 517 71.8
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 4.8e-207 725.7 509 72.5
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.1e-206 723.0 517 70.8
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 1.5e-205 720.7 513 71.7
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 2.9e-204 716.5 525 70.9
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 9.3e-203 711.4 505 72.5
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 5.1e-201 705.7 467 75.2
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.5e-200 704.1 516 71.1
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 1.3e-199 701.0 449 76.6
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 2.1e-199 700.3 479 72.7
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 2.1e-199 700.3 457 77.0
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 8.1e-199 698.4 449 75.7
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.1e-198 698.0 448 76.3
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 3.4e-197 693.0 454 73.6
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 3.8e-196 689.5 516 68.0
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 3.8e-196 689.5 476 72.5
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 3.8e-196 689.5 480 72.1
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 6.4e-196 688.7 478 72.4
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.9e-195 687.2 448 75.0
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 1.9e-195 687.2 470 72.1
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 2.5e-195 686.8 505 68.3
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 3.2e-195 686.4 453 75.3
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 5.5e-195 685.6 450 74.2
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 2.1e-194 683.7 476 71.4
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 3.5e-194 682.9 457 72.9
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.0e-193 681.4 469 71.6
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 6.7e-193 678.7 511 69.7
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 6.7e-193 678.7 507 67.9
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 6.7e-193 678.7 486 70.4
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 1.1e-192 677.9 490 70.6
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 3.3e-192 676.4 448 74.3
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 3.7e-191 672.9 588 62.2
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.8e-191 672.5 503 66.6
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 6.2e-191 672.2 450 73.6
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 9.0e-190 668.3 472 70.6
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.7e-188 664.1 456 73.0
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 2.9e-188 663.3 486 66.7
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 3.8e-188 662.9 482 67.4
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 1.9e-187 660.6 482 67.2
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 3.2e-187 659.8 497 65.8
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 9.3e-187 658.3 527 63.8
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 1.6e-186 657.5 488 66.6
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.7e-186 656.8 446 71.3
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 3.0e-185 653.3 454 70.0
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 5.1e-185 652.5 513 66.3
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 2.2e-183 647.1 466 68.2
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 2.4e-182 643.7 406 77.8
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 5.9e-181 639.0 454 70.7
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 2.9e-180 636.7 410 76.3
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 1.1e-179 634.8 414 75.6
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 3.2e-179 633.3 465 69.7
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 1.8e-177 627.5 481 66.9
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 1.7e-175 620.9 405 76.8
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 3.1e-174 616.7 463 69.8
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 7.7e-173 612.1 449 68.4
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 1.2e-170 604.7 453 67.1
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 1.5e-168 597.8 409 70.4
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 6.3e-167 592.4 410 71.2
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 3.1e-166 590.1 361 79.8
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 2.6e-165 587.0 404 70.5
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 7.7e-165 585.5 449 65.3
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 1.7e-164 584.3 434 67.7
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 5.0e-164 582.8 457 66.5
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 1.4e-161 574.7 456 64.0
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 1.8e-161 574.3 513 61.0
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 1.5e-160 571.2 457 65.6
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 3.6e-154 550.1 324 85.8
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 1.4e-153 548.1 324 85.8
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.0e-153 547.0 364 73.1
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 8.3e-151 538.9 448 62.5
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 3.1e-150 537.0 458 59.2
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 2.1e-146 524.2 460 57.2
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.5e-139 501.5 382 64.4
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 1.2e-138 498.4 338 72.8
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 1.9e-126 458.0 455 53.8
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 3.1e-121 440.7 445 52.8
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 4.7e-114 416.8 264 73.5
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 4.0e-113 413.7 487 46.8
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 5.6e-107 393.3 211 91.5
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.2e-101 375.6 271 67.5
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 2.0e-96 358.2 463 44.1
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 9.6e-91 339.3 206 76.2
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 2.6e-80 304.7 287 55.4
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 2.2e-79 301.6 250 64.8
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 5.9e-64 250.4 305 50.5
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.2e-63 248.4 194 63.4
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 2.9e-55 221.5 163 66.3
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 3.8e-55 221.1 472 35.4
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 3.6e-37 161.4 93 81.7
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.2e-35 156.4 109 64.2
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.0e-31 143.3 85 84.7
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 9.4e-30 136.7 89 75.3
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 1.2e-16 93.2 58 72.4
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 5.2e-12 77.8 42 90.5
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 2.2e-10 72.4 114 41.2


User provided reference genes

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