Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 2.9e-156 555.4 332 100.0
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 7.2e-67 258.5 184 79.9
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 3.4e-56 223.0 358 55.9
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 8.3e-55 218.4 305 53.4
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 1.1e-46 191.4 334 46.4
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.5e-43 180.3 204 54.9
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 2.5e-43 180.3 303 44.9
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 4.3e-43 179.5 225 53.3
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 4.3e-43 179.5 193 57.0
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 7.3e-43 178.7 307 45.6
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 2.1e-42 177.2 212 53.3
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 2.8e-42 176.8 281 45.9
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 6.2e-42 175.6 281 45.6
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 3.1e-41 173.3 280 46.1
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 6.8e-41 172.2 279 45.9
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 8.9e-41 171.8 251 51.4
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 1.5e-40 171.0 291 43.6
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 7.5e-40 168.7 303 47.9
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 4.9e-39 166.0 178 55.6
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 4.9e-39 166.0 325 39.4
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 4.9e-39 166.0 275 44.7
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 6.4e-39 165.6 288 46.2
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 1.4e-38 164.5 259 47.1
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 4.1e-38 162.9 277 46.2
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 5.4e-38 162.5 217 49.3
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.2e-37 161.4 270 46.7
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 1.6e-37 161.0 260 44.6
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 2.7e-37 160.2 296 45.3
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 2.7e-37 160.2 276 47.1
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 6.0e-37 159.1 327 44.0
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 7.8e-37 158.7 253 44.3
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 7.8e-37 158.7 205 51.7
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 1.0e-36 158.3 203 48.3
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 1.0e-36 158.3 175 54.9
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 1.3e-36 157.9 286 43.7
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.3e-36 157.9 222 48.6
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 1.7e-36 157.5 242 46.3
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 8.6e-36 155.2 211 49.8
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 8.6e-36 155.2 211 49.8
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 3.3e-35 153.3 178 51.1
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 4.3e-35 152.9 278 42.8
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 4.3e-35 152.9 272 42.3
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 5.6e-35 152.5 281 43.4
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 9.5e-35 151.8 206 47.1
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 9.5e-35 151.8 217 47.9
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.2e-34 151.4 216 48.1
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.2e-34 151.4 178 52.8
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.2e-34 151.4 259 42.9
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.2e-34 151.4 190 53.7
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.1e-34 150.6 236 44.9
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 6.2e-34 149.1 236 44.5
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.2e-34 149.1 236 44.5
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 6.2e-34 149.1 225 48.0
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.1e-33 148.3 177 48.6
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 1.4e-33 147.9 176 51.1
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.4e-33 147.9 151 55.6
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.4e-33 147.1 149 58.4
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 3.1e-33 146.7 183 50.3
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 3.1e-33 146.7 220 44.5
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 4.0e-33 146.4 184 50.0
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 4.0e-33 146.4 272 40.4
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 5.2e-33 146.0 190 49.5
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.2e-33 146.0 236 44.1
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 5.2e-33 146.0 146 56.8
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 8.9e-33 145.2 178 51.7
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.2e-32 144.8 151 55.6
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 1.5e-32 144.4 156 55.1
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 4.4e-32 142.9 183 50.3
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 5.8e-32 142.5 173 50.9
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 1.3e-31 141.4 151 54.3
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.3e-31 141.4 268 41.0
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 2.2e-31 140.6 301 40.9
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.9e-31 140.2 313 37.4
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 4.9e-31 139.4 212 44.3
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 8.4e-31 138.7 173 50.3
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.1e-30 138.3 293 39.9
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.4e-30 137.9 173 49.1
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 1.4e-30 137.9 312 37.2
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.9e-30 137.5 212 43.9
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.9e-30 137.5 211 45.0
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.9e-30 137.5 339 40.7
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 1.9e-30 137.5 144 55.6
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 3.2e-30 136.7 197 47.2
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 5.4e-30 136.0 178 47.8
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 7.1e-30 135.6 178 48.9
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 7.1e-30 135.6 178 48.9
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 2.7e-29 133.7 207 44.9
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 4.6e-29 132.9 156 53.2
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 4.6e-29 132.9 261 44.4
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.9e-28 129.8 225 42.7
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 5.1e-28 129.4 158 50.6
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 5.1e-28 129.4 178 48.9
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.1e-27 128.3 167 48.5
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 9.6e-27 125.2 152 47.4
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 8.1e-26 122.1 166 48.8
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 8.1e-26 122.1 166 48.8
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 1.8e-25 120.9 170 47.6
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.8e-25 120.9 170 47.6
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 1.8e-25 120.9 170 47.6
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 5.3e-25 119.4 140 51.4
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.2e-24 118.2 142 49.3
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 2.9e-23 113.6 214 37.4
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.7e-20 104.4 149 45.0
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.1e-19 101.7 212 39.2
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 1.5e-19 101.3 57 96.5
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 1.3e-18 98.2 98 55.1
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-17 95.1 66 71.2
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-17 95.1 66 71.2
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.4e-17 94.0 60 75.0
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.2e-16 91.7 60 73.3
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.5e-16 91.3 57 77.2
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 5.4e-14 82.8 77 59.7
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 9.3e-14 82.0 169 33.7
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 7.9e-13 79.0 51 80.4
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.0e-12 78.6 92 51.1
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.3e-12 78.2 67 65.7
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 6.7e-12 75.9 203 33.0
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 1.1e-11 75.1 147 35.4
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 7.4e-11 72.4 163 33.1
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 5.3e-09 66.2 146 35.6


User provided reference genes

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