Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02292 Corylus avellana HOM05D052043 ORTHO05D000816 1.1e-63 246.5 125 100.0
Haze_08515 Corylus avellana HOM05D052043 ORTHO05D000816 2.7e-38 162.2 112 79.5
Haze_07233 Corylus avellana HOM05D000135 ORTHO05D000816 6.4e-24 114.4 64 89.1
Cfa018839 Carpinus fangiana HOM05D000135 ORTHO05D000816 4.3e-20 101.7 64 78.1
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 9.2e-15 84.0 72 63.9
Haze_13933 Corylus avellana HOM05D000135 ORTHO05D000816 1.6e-14 83.2 51 80.4
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 6.0e-14 81.3 64 65.6
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 1.0e-13 80.5 64 65.6
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 1.7e-13 79.7 64 68.8
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 1.9e-12 76.3 64 62.5
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.5e-12 75.9 64 62.5
Lj1g0021536 Lotus japonicus HOM05D000135 ORTHO05D000816 3.3e-12 75.5 59 67.8
Atru.chr9.1078 Acer truncatum HOM05D000135 ORTHO05D000816 5.6e-12 74.7 59 66.1
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 5.6e-12 74.7 72 58.3
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 1.2e-11 73.6 64 60.9
Glyma.04G136200 Glycine max HOM05D000135 ORTHO05D000816 1.2e-11 73.6 59 64.4
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.8e-11 72.4 72 56.9
Eucgr.B00123 Eucalyptus grandis HOM05D000135 ORTHO05D000816 4.7e-11 71.6 64 60.9
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 4.7e-11 71.6 64 59.4
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 6.2e-11 71.2 72 55.6
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.2e-11 71.2 72 55.6
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 8.1e-11 70.9 59 67.8
Glyma.04G136300 Glycine max HOM05D000135 ORTHO05D000816 1.4e-10 70.1 59 61.0
Ciclev10022753m.g Citrus clementina HOM05D000135 ORTHO05D000816 1.8e-10 69.7 55 60.0
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.8e-10 69.7 64 60.9
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.3e-10 69.3 72 55.6
CANSAT80G0027 Cannabis sativa HOM05D000135 ORTHO05D000816 5.2e-10 68.2 79 53.2
CANSAT80G1445 Cannabis sativa HOM05D000135 ORTHO05D000816 5.2e-10 68.2 79 53.2
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 5.2e-10 68.2 65 58.5
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 6.8e-10 67.8 65 58.5
TWI14G0593 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 6.8e-10 67.8 64 51.6
Phvul.005G026100 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 8.9e-10 67.4 76 52.6
Glyma.18G177900 Glycine max HOM05D000135 ORTHO05D000816 1.2e-09 67.0 60 58.3
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 2.0e-09 66.2 65 56.9
MBI03_g33916_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 2.6e-09 65.9 64 54.7
Nn4g22368 Nelumbo nucifera HOM05D000135 ORTHO05D000816 3.4e-09 65.5 83 45.8
Gohir.A03G053400 Gossypium hirsutum HOM05D000135 ORTHO05D000816 5.8e-09 64.7 50 70.0
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 5.8e-09 64.7 122 38.5
CSS0033756 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000816 7.5e-09 64.3 76 50.0
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 7.5e-09 64.3 71 50.7
Nn4g22363 Nelumbo nucifera HOM05D000135 ORTHO05D000816 7.5e-09 64.3 64 56.2
PGSC0003DMG400013427 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.9e-09 63.9 73 49.3
Lj2C97T3 Lonicera japonica HOM05D000135 ORTHO05D000816 1.3e-08 63.5 64 54.7
GSVIVG01010385001 Vitis vinifera HOM05D000135 ORTHO05D000816 1.7e-08 63.2 59 55.9
VMungo1080G0993 Vigna mungo HOM05D000135 ORTHO05D000816 2.2e-08 62.8 60 55.0
MBI01_g09380_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 2.9e-08 62.4 59 57.6
Dinv14818 Davidia involucrata HOM05D000135 ORTHO05D000816 3.7e-08 62.0 68 48.5
Sopen03g001050 Solanum pennellii HOM05D000135 ORTHO05D000816 4.9e-08 61.6 76 50.0
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 4.9e-08 61.6 71 52.1
MBI01_g21123_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 6.4e-08 61.2 59 55.9
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 6.4e-08 61.2 72 48.6
Sc09g0007590 Simmondsia chinensis HOM05D000135 ORTHO05D000816 6.4e-08 61.2 59 57.6
Hma1.2p1_1219F.1_g267950 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 8.3e-08 60.8 59 57.6
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 1.4e-07 60.1 58 58.6
Solyc03g005040.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 1.4e-07 60.1 76 48.7
Aqoxy5G00935 Aquilegia oxysepala HOM05D000135 ORTHO05D000816 1.9e-07 59.7 64 53.1
Gohir.A10G155722 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.9e-07 59.7 65 56.9
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 1.9e-07 59.7 58 55.2
CANSAT64G0052 Cannabis sativa HOM05D000135 ORTHO05D000816 2.4e-07 59.3 58 55.2
Peaxi162Scf00259g00018 Petunia axillaris HOM05D000135 ORTHO05D000816 3.2e-07 58.9 102 37.3
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 3.2e-07 58.9 72 45.8
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.2e-07 58.9 70 48.6
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.2e-07 58.9 72 45.8
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 4.1e-07 58.5 59 55.9
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 4.1e-07 58.5 71 52.1
Rhsim08G0044100 Rhododendron simsii HOM05D000135 ORTHO05D000816 4.1e-07 58.5 59 59.3
GSVIVG01013467001 Vitis vinifera HOM05D000135 ORTHO05D000816 4.1e-07 58.5 79 45.6
EL10Ac2g03275 Beta vulgaris HOM05D000135 ORTHO05D000816 5.4e-07 58.2 62 51.6
CAN.G742.23 Capsicum annuum HOM05D000135 ORTHO05D000816 5.4e-07 58.2 72 48.6
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 5.4e-07 58.2 59 54.2
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 5.4e-07 58.2 67 49.3
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 5.4e-07 58.2 95 37.9
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 5.4e-07 58.2 59 54.2
TAR371G1215 Trochodendron aralioides HOM05D000186 ORTHO05D001471 5.4e-07 58.2 48 64.6
AT3G50770 Arabidopsis thaliana HOM05D000135 ORTHO05D000816 7.1e-07 57.8 90 41.1
DCAR_013352 Daucus carota HOM05D000135 ORTHO05D000816 7.1e-07 57.8 85 42.4
Duzib093G1260 Durio zibethinus HOM05D000135 ORTHO05D000816 7.1e-07 57.8 62 53.2
Gohir.D10G109651 Gossypium hirsutum HOM05D000135 ORTHO05D000816 7.1e-07 57.8 65 55.4
Hma1.2p1_1219F.1_g267940 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 7.1e-07 57.8 59 55.9
Oeu035215.1 Olea europaea HOM05D000135 ORTHO05D000816 7.1e-07 57.8 59 54.2
Aqoxy5G03431 Aquilegia oxysepala HOM05D000135 ORTHO05D000816 9.2e-07 57.4 83 39.8
Haze_15145 Corylus avellana HOM05D000135 ORTHO05D000816 9.2e-07 57.4 81 42.0
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 9.2e-07 57.4 58 53.4
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 9.2e-07 57.4 59 57.6
QL02p016429 Quercus lobata HOM05D000135 ORTHO05D000816 9.2e-07 57.4 101 41.6
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 9.2e-07 57.4 70 47.1
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.2e-07 57.4 70 48.6
CANSAT25G2687 Cannabis sativa HOM05D000135 ORTHO05D000816 1.2e-06 57.0 73 46.6
MBI14_g17348_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 1.2e-06 57.0 64 50.0
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 1.2e-06 57.0 70 45.7
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 1.2e-06 57.0 70 45.7
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 1.2e-06 57.0 70 45.7
CAN.G742.5 Capsicum annuum HOM05D000135 ORTHO05D000816 1.6e-06 56.6 72 44.4
Cpa.g.sc36.91 Carica papaya HOM05D000135 ORTHO05D000816 1.6e-06 56.6 77 48.1
MBI04_g28566_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 1.6e-06 56.6 64 48.4
Nitab4.5_0000875g0030 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.6e-06 56.6 59 55.9
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 1.6e-06 56.6 72 44.4
Oeu058772.1 Olea europaea HOM05D000135 ORTHO05D000816 2.1e-06 56.2 63 54.0
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 2.1e-06 56.2 56 55.4
TAR629G1517 Trochodendron aralioides HOM05D000135 ORTHO05D000816 2.1e-06 56.2 69 49.3
Haze_14848 Corylus avellana HOM05D000135 ORTHO05D000816 2.7e-06 55.8 59 52.5
CsaV3_5G028580 Cucumis sativus L. HOM05D000135 ORTHO05D000816 2.7e-06 55.8 66 51.5
FvH4_5g26790 Fragaria vesca HOM05D000135 ORTHO05D000816 2.7e-06 55.8 89 41.6
FAN18G1887 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.7e-06 55.8 89 41.6
Glyma.09G102500 Glycine max HOM05D000135 ORTHO05D000816 2.7e-06 55.8 41 63.4
Manes.05G113200 Manihot esculenta HOM05D000135 ORTHO05D000816 2.7e-06 55.8 73 45.2
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 2.7e-06 55.8 59 54.2
Oeu011957.1 Olea europaea HOM05D000135 ORTHO05D000816 2.7e-06 55.8 73 47.9
COL.COLO4_12261 Corchorus olitorius HOM05D000135 ORTHO05D000816 3.5e-06 55.5 61 52.5
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 3.5e-06 55.5 58 55.2
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.6e-06 55.1 58 51.7
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 6.0e-06 54.7 58 53.4
FAN08G1719 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.0e-06 54.7 80 45.0
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.0e-06 54.7 58 53.4
FAN04G2622 Fragaria x ananassa HOM05D000135 ORTHO05D000816 7.8e-06 54.3 64 50.0
HanXRQChr07g0204321 Helianthus annuus HOM05D000135 ORTHO05D000816 7.8e-06 54.3 63 52.4
MBI12_g27790_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 7.8e-06 54.3 59 52.5
Peaxi162Scf00700g00017 Petunia axillaris HOM05D000135 ORTHO05D000816 7.8e-06 54.3 71 46.5
QL02p016421 Quercus lobata HOM05D000135 ORTHO05D000816 7.8e-06 54.3 78 42.3
Sabra12G0070300 Salix brachista HOM05D020013 ORTHO05D023090 7.8e-06 54.3 61 52.5
Thecc.08G097200 Theobroma cacao HOM05D000135 ORTHO05D000816 7.8e-06 54.3 82 43.9


User provided reference genes

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