Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02267 Corylus avellana HOM05D000533 ORTHO05D006151 1.7e-53 212.2 95 100.0
Solyc11g021220.2 Solanum lycopersicum HOM05D000533 ORTHO05D006151 3.8e-21 104.8 62 77.4
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 6.5e-21 104.0 103 53.4
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 6.5e-21 104.0 103 53.4
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 6.5e-21 104.0 103 53.4
Lalb_Chr09g0335441 Lupinus albus HOM05D000533 ORTHO05D006151 1.1e-20 103.2 103 55.3
Lsat_1_v5_gn_4_118101 Lactuca sativa HOM05D000533 ORTHO05D006151 1.2e-19 99.8 62 75.8
Medtr5g063400 Medicago truncatula HOM05D000533 ORTHO05D006151 1.2e-19 99.8 62 74.2
Peaxi162Scf00137g00153 Petunia axillaris HOM05D000533 ORTHO05D006151 1.2e-19 99.8 62 75.8
HanXRQChr00c0718g0576981 Helianthus annuus HOM05D000533 ORTHO05D006151 1.6e-19 99.4 62 74.2
HanXRQChr01g0020061 Helianthus annuus HOM05D000533 ORTHO05D006151 1.6e-19 99.4 62 74.2
HanXRQChr05g0152461 Helianthus annuus HOM05D000533 ORTHO05D006151 1.6e-19 99.4 62 74.2
Haze_27676 Corylus avellana HOM05D000533 ORTHO05D006151 8.0e-19 97.1 61 73.8
Nitab4.5_0007979g0080 Nicotiana tabacum HOM05D000533 ORTHO05D006151 1.2e-17 93.2 62 74.2
Solyc03g013615.1 Solanum lycopersicum HOM05D000533 ORTHO05D006151 1.5e-17 92.8 62 72.6
Gohir.A08G123600 Gossypium hirsutum HOM05D000533 ORTHO05D006151 3.4e-17 91.7 62 72.6
HanXRQChr00c0495g0575151 Helianthus annuus HOM05D000533 ORTHO05D006151 3.1e-15 85.1 63 69.8
Medtr8g086030 Medicago truncatula HOM05D000533 ORTHO05D006151 5.9e-14 80.9 50 72.0
BolSC45t60907H Brassica oleracea HOM05D000533 ORTHO05D006151 1.0e-13 80.1 62 64.5
BraSC138t45533Z Brassica rapa HOM05D000533 ORTHO05D006151 1.7e-13 79.3 47 76.6
C07p33460 Brassica napus HOM05D000533 ORTHO05D006151 3.8e-13 78.2 62 62.9
BolSC47t61063H Brassica oleracea HOM05D000533 ORTHO05D006151 3.8e-13 78.2 62 62.9
Medtr3g054410 Medicago truncatula HOM05D000533 ORTHO05D006151 6.5e-13 77.4 43 76.7
Manes.17G012402 Manihot esculenta HOM05D000533 ORTHO05D006151 1.5e-12 76.3 62 62.9
AL9U11958 Arabidopsis lyrata HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
ATCG01090 Arabidopsis thaliana HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
C09p24660 Brassica napus HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
C09p40170 Brassica napus HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
BolC2t10613H Brassica oleracea HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
BolSC29t60508H Brassica oleracea HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
BolSC35t60690H Brassica oleracea HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
BolSC35t60706H Brassica oleracea HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
BolSC46t60956H Brassica oleracea HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
BraSC143t45658Z Brassica rapa HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
BraSC59t46553Z Brassica rapa HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
Medtr3g450170 Medicago truncatula HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 1.9e-12 75.9 62 61.3
Medtr5g015855 Medicago truncatula HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
Medtr6g042210 Medicago truncatula HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 1.9e-12 75.9 62 61.3
Nn031s41615 Nelumbo nucifera HOM05D000533 ORTHO05D006151 2.5e-12 75.5 62 59.7
Nn064s42208 Nelumbo nucifera HOM05D000533 ORTHO05D006151 2.5e-12 75.5 62 59.7
Psat0s6989g0200 Pisum sativum HOM05D000533 ORTHO05D006151 2.5e-12 75.5 62 59.7
Psat3g095000 Pisum sativum HOM05D000533 ORTHO05D006151 2.5e-12 75.5 62 59.7
Psat6g140600 Pisum sativum HOM05D000533 ORTHO05D006151 2.5e-12 75.5 62 59.7
Psat6g140640 Pisum sativum HOM05D000533 ORTHO05D006151 2.5e-12 75.5 62 59.7
DCAR_018912 Daucus carota HOM05D000533 ORTHO05D006151 5.5e-12 74.3 61 59.0
DCAR_032540 Daucus carota HOM05D000533 ORTHO05D006151 5.5e-12 74.3 61 59.0
C02p28830 Brassica napus HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
CAN.G1045.11 Capsicum annuum HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
CAN.G1298.19 Capsicum annuum HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
CAN.G1526.2 Capsicum annuum HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
CAN.G278.1 Capsicum annuum HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
CAN.G413.10 Capsicum annuum HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
CAN.G939.4 Capsicum annuum HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
Lalb_Chr07g0191791 Lupinus albus HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
Peaxi162Scf00030g02119 Petunia axillaris HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
Peaxi162Scf00269g01411 Petunia axillaris HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
PGR111G0107 Punica granatum HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
RcHm_v2.0_Chr5g0017191 Rosa chinensis HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
RcHm_v2.0_CPg0502751 Rosa chinensis HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
TAR625G0707 Trochodendron aralioides HOM05D000533 ORTHO05D006151 9.5e-12 73.6 62 59.7
Migut.D01250 Erythranthe guttata HOM05D000533 ORTHO05D006151 1.2e-11 73.2 62 58.1
HanXRQChr00c0336g0573681 Helianthus annuus HOM05D000533 ORTHO05D006151 1.2e-11 73.2 62 58.1
HanXRQChr02g0059731 Helianthus annuus HOM05D000533 ORTHO05D006151 1.2e-11 73.2 62 58.1
HanXRQChr09g0258491 Helianthus annuus HOM05D000533 ORTHO05D006151 1.2e-11 73.2 62 58.1
HanXRQChr13g0421831 Helianthus annuus HOM05D000533 ORTHO05D006151 1.2e-11 73.2 62 58.1
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-11 73.2 62 58.1
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-11 73.2 62 58.1
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-11 73.2 62 58.1
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-11 73.2 62 58.1
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-11 73.2 62 58.1
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 1.2e-11 73.2 62 58.1
PSO548G0083 Papaver somniferum HOM05D000533 ORTHO05D006151 2.1e-11 72.4 62 58.1
Psat4g190120 Pisum sativum HOM05D000533 ORTHO05D006151 2.8e-11 72.0 62 56.5
LjContig00318g0022534 Lotus japonicus HOM05D000533 ORTHO05D006151 3.6e-11 71.6 62 58.1
LjContig00319g0019672 Lotus japonicus HOM05D000533 ORTHO05D006151 3.6e-11 71.6 62 58.1
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 3.6e-11 71.6 62 58.1
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 3.6e-11 71.6 62 58.1
Ciclev10013971m.g Citrus clementina HOM05D000533 ORTHO05D006151 1.8e-10 69.3 62 56.5
Ciclev10013973m.g Citrus clementina HOM05D000533 ORTHO05D006151 1.8e-10 69.3 62 56.5
Solyc01g086880.3 Solanum lycopersicum HOM05D000533 ORTHO05D006151 2.3e-10 68.9 47 66.0
Solyc02g011780.3 Solanum lycopersicum HOM05D000533 ORTHO05D006151 8.8e-10 67.0 62 56.5
SalBow1G0791 Salvia bowleyana HOM05D000533 ORTHO05D006151 2.0e-09 65.9 62 51.6
ClCG07G005240 Citrullus lanatus HOM05D000533 ORTHO05D006151 7.5e-09 63.9 43 60.5
HanXRQChr02g0037941 Helianthus annuus HOM05D000003 ORTHO05D000004 7.5e-09 63.9 39 74.4
Lsat_1_v5_gn_6_54141 Lactuca sativa HOM05D000533 ORTHO05D006151 7.5e-09 63.9 48 66.7
Medtr4g050810 Medicago truncatula HOM05D000533 ORTHO05D006151 8.3e-08 60.5 129 34.1
Aa31LG5G21720 Aethionema arabicum HOM05D000533 ORTHO05D006151 1.1e-07 60.1 78 51.3
HanXRQChr02g0037961 Helianthus annuus HOM05D000533 ORTHO05D006151 1.1e-07 60.1 57 56.1
Gohir.D01G099050 Gossypium hirsutum HOM05D000533 ORTHO05D006151 1.8e-07 59.3 35 77.1
Nn1g00559 Nelumbo nucifera HOM05D000533 ORTHO05D006151 1.8e-07 59.3 61 50.8
TPR.G38950 Trifolium pratense HOM05D000533 ORTHO05D006151 1.8e-07 59.3 38 71.1
BolSC37t60802H Brassica oleracea HOM05D000533 ORTHO05D006151 2.4e-07 58.9 32 81.2
Lalb_Chr18g0049621 Lupinus albus HOM05D000533 ORTHO05D006151 2.0e-06 55.8 37 70.3


User provided reference genes

Program Settings