Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 2.3e-131 472.2 241 100.0
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 5.5e-117 424.5 239 92.9
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 1.6e-63 246.9 376 43.1
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 2.1e-63 246.5 240 57.9
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 1.4e-59 233.8 240 53.8
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 1.4e-56 223.8 250 52.0
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 5.1e-54 215.3 248 49.2
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 6.2e-52 208.4 249 49.4
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 1.5e-50 203.8 242 49.2
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 2.2e-49 199.9 251 49.4
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 3.8e-49 199.1 245 47.3
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 1.4e-48 197.2 251 45.8
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 1.9e-48 196.8 246 46.7
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 7.1e-48 194.9 247 45.7
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 9.3e-48 194.5 234 49.6
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 4.6e-47 192.2 237 46.4
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 3.9e-46 189.1 241 47.3
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 1.5e-45 187.2 245 44.9
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 7.4e-45 184.9 224 49.6
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 7.4e-45 184.9 245 46.9
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 1.6e-44 183.7 241 45.6
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 2.1e-44 183.3 238 46.2
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 8.2e-44 181.4 241 45.2
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.1e-43 181.0 250 45.2
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.1e-43 181.0 232 47.0
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 7.6e-42 174.9 253 45.5
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 3.2e-40 169.5 216 47.7
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 5.5e-40 168.7 254 42.1
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 1.2e-39 167.5 329 36.5
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 1.2e-39 167.5 242 41.7
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 1.0e-38 164.5 283 39.9
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 3.3e-37 159.5 232 44.0
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 7.4e-37 158.3 329 35.0
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 1.6e-36 157.1 238 39.9
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 2.2e-36 156.8 239 42.7
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 2.2e-36 156.8 258 40.3
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 6.3e-36 155.2 242 43.8
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 1.8e-35 153.7 249 41.4
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 2.0e-34 150.2 241 41.5
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 1.0e-33 147.9 244 38.5
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 1.7e-33 147.1 239 38.9
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.7e-33 147.1 201 43.8
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 2.2e-33 146.7 243 41.6
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 2.9e-33 146.4 243 41.2
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 3.8e-33 146.0 223 39.9
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 3.6e-31 139.4 252 39.3
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.4e-30 137.5 249 39.4
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 1.8e-30 137.1 251 39.8
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 3.0e-30 136.3 197 41.6
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 2.0e-29 133.7 235 39.1
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 2.0e-29 133.7 264 37.5
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 5.7e-29 132.1 250 38.8
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 1.4e-27 127.5 252 37.3
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 1.4e-27 127.5 284 32.7
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 1.8e-27 127.1 265 34.3
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.4e-27 126.7 249 38.2
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 9.1e-27 124.8 244 36.5
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 7.7e-26 121.7 244 37.3
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 1.0e-25 121.3 234 36.8
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 1.0e-25 121.3 258 35.7
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 1.1e-24 117.9 240 37.9
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 1.4e-24 117.5 240 37.5
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 3.2e-24 116.3 240 32.9
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 7.2e-24 115.2 240 36.2
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 7.9e-23 111.7 229 37.6
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 3.0e-22 109.8 237 36.7
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 8.8e-22 108.2 257 33.9
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 2.6e-21 106.7 222 36.0
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 3.3e-21 106.3 212 34.0
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 2.2e-20 103.6 257 35.4
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 2.8e-20 103.2 279 32.6
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 3.7e-20 102.8 244 36.1
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 1.2e-18 97.8 237 34.6
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 2.6e-18 96.7 239 33.1
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 7.7e-18 95.1 240 34.6
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 2.2e-17 93.6 217 32.7
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 7.2e-16 88.6 216 31.5
Glyma.12G151000 Glycine max HOM05D000120 ORTHO05D009410 1.6e-15 87.4 123 45.5
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.6e-15 87.4 206 33.5
FAN15G0678 Fragaria x ananassa HOM05D000722 ORTHO05D000590 1.4e-14 84.3 118 43.2
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 2.3e-14 83.6 243 30.0
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 2.0e-10 70.5 249 26.9
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 2.7e-10 70.1 254 28.0
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 5.9e-10 68.9 237 27.8
AL7G10880 Arabidopsis lyrata HOM05D011065 ORTHO05D009410 1.3e-09 67.8 270 28.9
arahy.Tifrunner.gnm1.ann1.T5BQ73 Arachis hypogaea HOM05D000120 ORTHO05D009410 2.9e-09 66.6 78 44.9
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 6.5e-09 65.5 300 25.7
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 1.5e-08 64.3 274 26.6
BcaC01g00270 Brassica carinata HOM05D011065 ORTHO05D009410 7.2e-08 62.0 258 24.4
C03p77470 Brassica napus HOM05D011065 ORTHO05D009410 7.2e-08 62.0 258 24.4
BolC3t20002H Brassica oleracea HOM05D011065 ORTHO05D009410 7.2e-08 62.0 258 24.4
AT4G38980 Arabidopsis thaliana HOM05D011065 ORTHO05D009410 9.4e-08 61.6 274 26.3
BcaC01g00269 Brassica carinata HOM05D011065 ORTHO05D009410 1.6e-07 60.8 247 25.5
C03p77450 Brassica napus HOM05D011065 ORTHO05D009410 1.6e-07 60.8 247 25.5
BolC3t20000H Brassica oleracea HOM05D011065 ORTHO05D009410 1.6e-07 60.8 247 25.5
BraA08t34348Z Brassica rapa HOM05D011065 ORTHO05D009410 3.6e-07 59.7 254 25.2
Carub.0007s0080 Capsella rubella HOM05D011065 ORTHO05D009410 4.7e-07 59.3 277 26.7
BcaB03g12236 Brassica carinata HOM05D011065 ORTHO05D009410 6.1e-07 58.9 266 25.6
PSO170G1560 Papaver somniferum HOM05D000120 ORTHO05D009410 8.0e-07 58.5 134 36.6
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 1.0e-06 58.2 273 25.3
CDE05G3178 Ceratophyllum demersum HOM05D054768 ORTHO05D043847 5.2e-06 55.8 270 27.8
HPP92_003062 Vanilla planifolia HOM05D000120 ORTHO05D009410 5.2e-06 55.8 242 27.7
CDE04G2781 Ceratophyllum demersum HOM05D055785 ORTHO05D043884 6.8e-06 55.5 77 46.8


User provided reference genes

Program Settings