Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 5.5e-220 767.3 382 100.0
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 6.7e-218 760.4 382 99.2
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 2.4e-154 549.3 324 85.8
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 1.0e-117 427.6 325 67.4
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 1.7e-112 410.2 330 64.8
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 4.7e-102 375.6 330 61.5
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 1.8e-101 373.6 314 62.1
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 4.0e-101 372.5 319 62.7
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 1.2e-100 370.9 320 61.6
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 2.8e-99 366.3 340 57.6
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 8.3e-99 364.8 360 56.9
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 1.1e-98 364.4 341 58.7
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 4.1e-98 362.5 324 59.6
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 5.4e-98 362.1 320 60.3
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 7.0e-98 361.7 316 61.4
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.6e-97 360.5 312 60.9
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 1.6e-97 360.5 314 61.1
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.7e-97 359.8 365 54.2
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.3e-96 357.5 311 60.8
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 1.7e-96 357.1 312 60.9
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.8e-96 355.9 311 60.5
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 3.8e-96 355.9 327 58.4
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 6.5e-96 355.1 308 61.4
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 1.6e-94 350.5 326 59.2
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 1.6e-94 350.5 296 61.8
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 3.6e-94 349.4 173 98.3
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 6.1e-94 348.6 309 61.8
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.0e-93 347.8 333 57.1
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 4.0e-93 345.9 310 59.0
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 5.2e-93 345.5 320 58.4
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 1.5e-92 344.0 298 61.4
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 4.4e-92 342.4 315 57.5
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 4.4e-92 342.4 295 59.7
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 1.3e-91 340.9 332 56.3
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.3e-91 340.9 292 60.6
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 1.7e-91 340.5 332 55.7
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 2.8e-91 339.7 294 60.5
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 3.7e-91 339.3 296 60.1
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.1e-90 337.8 298 58.1
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 1.4e-90 337.4 285 61.1
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 1.4e-90 337.4 315 57.8
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 1.8e-90 337.0 345 53.6
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 2.4e-90 336.7 267 64.8
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 3.1e-90 336.3 338 54.4
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 4.1e-90 335.9 301 59.8
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 1.2e-89 334.3 262 63.7
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 3.5e-89 332.8 250 67.2
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 4.5e-89 332.4 322 56.5
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 4.5e-89 332.4 317 56.5
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 5.9e-89 332.0 317 55.8
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 7.7e-89 331.6 295 58.6
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 7.7e-89 331.6 305 58.0
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 1.3e-88 330.9 293 59.4
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 6.6e-88 328.6 256 64.5
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 8.6e-88 328.2 364 50.8
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 1.1e-87 327.8 322 54.3
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 1.9e-87 327.0 288 58.7
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 1.9e-87 327.0 304 56.6
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 2.5e-87 326.6 294 57.1
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.5e-87 326.6 338 53.0
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 3.3e-87 326.2 330 51.8
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 4.2e-87 325.9 326 52.8
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 5.6e-87 325.5 310 57.4
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 9.5e-87 324.7 326 52.8
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 3.6e-86 322.8 294 57.8
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 4.7e-86 322.4 341 51.0
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 8.0e-86 321.6 293 59.7
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 8.0e-86 321.6 321 52.6
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.0e-85 319.7 291 59.5
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 5.2e-85 318.9 307 56.0
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 1.5e-84 317.4 318 54.1
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.0e-84 317.0 291 57.0
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 7.5e-84 315.1 329 52.9
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 9.8e-84 314.7 282 59.6
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.3e-83 314.3 318 52.8
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 3.7e-83 312.8 292 55.8
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 7.0e-82 308.5 251 64.5
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 2.3e-80 303.5 253 60.1
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 8.6e-80 301.6 262 60.3
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 1.5e-79 300.8 206 68.9
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 3.3e-79 299.7 315 53.0
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 7.3e-79 298.5 334 52.4
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 9.5e-79 298.1 250 60.4
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 5.2e-77 292.4 248 59.7
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 3.0e-72 276.6 244 57.8
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 8.6e-72 275.0 206 66.5
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 2.5e-71 273.5 281 53.0
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 3.2e-66 256.5 328 47.9
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.3e-64 251.1 205 63.9
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 6.6e-64 248.8 207 61.8
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 6.6e-64 248.8 284 50.0
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 5.6e-63 245.7 302 45.7
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 1.6e-62 244.2 297 46.5
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 3.1e-61 240.0 209 57.9
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 8.9e-61 238.4 308 49.4
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 2.4e-58 230.3 202 59.4
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 5.4e-58 229.2 300 47.0
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 2.4e-53 213.8 186 59.7
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 6.6e-48 195.7 300 41.0
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 4.8e-46 189.5 298 42.3
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 1.2e-44 184.9 163 58.9
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 3.4e-44 183.3 206 52.9
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 1.3e-43 181.4 308 37.7
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 4.8e-38 162.9 331 35.3
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 7.4e-23 112.5 114 53.5
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.1e-21 106.7 106 50.9
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 6.9e-13 79.3 341 27.9
Rhsim06G0178600 Rhododendron simsii HOM05D001865 ORTHO05D001815 1.4e-10 71.6 44 86.4
TWI18G0602 Tripterygium wilfordii HOM05D001865 ORTHO05D001815 1.9e-10 71.2 44 86.4
Haze_12591 Corylus avellana HOM05D001865 ORTHO05D001815 2.5e-10 70.9 52 75.0
vmacro12064 Vaccinium macrocarpon HOM05D001865 ORTHO05D001815 5.5e-10 69.7 45 82.2
Ciclev10015636m.g Citrus clementina HOM05D001865 ORTHO05D001815 2.1e-09 67.8 44 79.5
Atru.chr6.3427 Acer truncatum HOM05D001865 ORTHO05D001815 4.6e-09 66.6 44 77.3
Duzib133G0666 Durio zibethinus HOM05D001865 ORTHO05D001815 1.0e-08 65.5 44 75.0
CSS0002483 Camellia sinensis var. sinensis HOM05D001865 ORTHO05D001815 1.4e-08 65.1 43 76.7
CSS0007019 Camellia sinensis var. sinensis HOM05D001865 ORTHO05D001815 1.4e-08 65.1 43 76.7
MD17G1105200 Malus domestica HOM05D001865 ORTHO05D001815 3.0e-08 63.9 47 72.3
Oeu036995.1 Olea europaea HOM05D001865 ORTHO05D001815 5.1e-08 63.2 44 72.7
FAN02G1396 Fragaria x ananassa HOM05D001865 ORTHO05D001815 6.7e-08 62.8 44 75.0
Hma1.2p1_0599F.1_g186990 Hydrangea macrophylla HOM05D001865 ORTHO05D001815 8.8e-08 62.4 44 72.7
FvH4_6g40430 Fragaria vesca HOM05D001865 ORTHO05D001815 1.5e-07 61.6 44 72.7
FAN05G1454 Fragaria x ananassa HOM05D001865 ORTHO05D001815 1.5e-07 61.6 42 76.2
FAN09G1376 Fragaria x ananassa HOM05D001865 ORTHO05D001815 1.5e-07 61.6 42 76.2
FAN09G3361 Fragaria x ananassa HOM05D001865 ORTHO05D001815 1.5e-07 61.6 42 76.2
FAN14G3808 Fragaria x ananassa HOM05D001865 ORTHO05D001815 2.0e-07 61.2 46 71.7
MBI14_g14416_MAGBIO Magnolia biondii HOM05D001865 ORTHO05D001815 9.7e-07 58.9 44 63.6
Migut.C01132 Erythranthe guttata HOM05D001865 ORTHO05D001815 1.3e-06 58.5 55 58.2
MSTRG.14904 Avicennia marina HOM05D001865 ORTHO05D001815 1.7e-06 58.2 45 62.2


User provided reference genes

Program Settings